RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 NISCHQ9Y2I1 1504 aa27.88■■■□□ 2.05
BMP4-204ENST00000558961 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
BMP4-204ENST00000558961 ABCC9O60706 1549 aa24.42■■□□□ 1.5
BMP4-204ENST00000558961 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
BMP4-204ENST00000558961 NACADO15069 1562 aa23.46■■□□□ 1.35
BMP4-204ENST00000558961 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.32
BMP4-204ENST00000558961 ZCCHC6Q5VYS8 1495 aaKnown RBP23.23■■□□□ 1.31
BMP4-204ENST00000558961 DCAF1Q9Y4B6 1507 aa23.14■■□□□ 1.3
BMP4-204ENST00000558961 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
BMP4-204ENST00000558961 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
BMP4-204ENST00000558961 BICRAQ9NZM4 1560 aa22.84■■□□□ 1.25
BMP4-204ENST00000558961 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
BMP4-204ENST00000558961 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
BMP4-204ENST00000558961 SHROOM4Q9ULL8 1493 aa22.65■■□□□ 1.22
BMP4-204ENST00000558961 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
BMP4-204ENST00000558961 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
BMP4-204ENST00000558961 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
BMP4-204ENST00000558961 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
BMP4-204ENST00000558961 SMARCA4P51532 1647 aa21.71■■□□□ 1.07
BMP4-204ENST00000558961 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
BMP4-204ENST00000558961 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
BMP4-204ENST00000558961 SMARCA2P51531 1590 aa21.59■■□□□ 1.05
BMP4-204ENST00000558961 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.05
BMP4-204ENST00000558961 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
BMP4-204ENST00000558961 PEG3Q9GZU2 1588 aa21.56■■□□□ 1.04
BMP4-204ENST00000558961 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
BMP4-204ENST00000558961 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.01
BMP4-204ENST00000558961 WIZO95785 1651 aa21.24■□□□□ 0.99
BMP4-204ENST00000558961 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
BMP4-204ENST00000558961 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
BMP4-204ENST00000558961 NESP48681 1621 aa21.11■□□□□ 0.97
BMP4-204ENST00000558961 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
BMP4-204ENST00000558961 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
BMP4-204ENST00000558961 CUX2O14529 1486 aa21.01■□□□□ 0.95
BMP4-204ENST00000558961 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
BMP4-204ENST00000558961 KIF21AQ7Z4S6 1674 aa20.94■□□□□ 0.94
BMP4-204ENST00000558961 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
BMP4-204ENST00000558961 PDS5BQ9NTI5 1447 aa20.89■□□□□ 0.94
BMP4-204ENST00000558961 CFTRP13569 1480 aa20.82■□□□□ 0.92
BMP4-204ENST00000558961 PRDM2Q13029 1718 aa20.77■□□□□ 0.92
BMP4-204ENST00000558961 MRC2Q9UBG0 1479 aa20.73■□□□□ 0.91
BMP4-204ENST00000558961 WDR62O43379 1518 aa20.73■□□□□ 0.91
BMP4-204ENST00000558961 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
BMP4-204ENST00000558961 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
BMP4-204ENST00000558961 FANCD2Q9BXW9 1451 aa20.7■□□□□ 0.9
BMP4-204ENST00000558961 URB2Q14146 1524 aaKnown RBP20.53■□□□□ 0.88
BMP4-204ENST00000558961 DNAJC5Q9H3Z4 198 aa20.46■□□□□ 0.87
BMP4-204ENST00000558961 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
BMP4-204ENST00000558961 ABCC8Q09428 1581 aa20.37■□□□□ 0.85
BMP4-204ENST00000558961 DNMBPQ6XZF7 1577 aa20.37■□□□□ 0.85
BMP4-204ENST00000558961 IFT140Q96RY7 1462 aa20.29■□□□□ 0.84
BMP4-204ENST00000558961 SUPT5HO00267 1087 aaKnown RBP20.27■□□□□ 0.84
BMP4-204ENST00000558961 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
BMP4-204ENST00000558961 POLA1P09884 1462 aaPredicted RBP20.19■□□□□ 0.82
BMP4-204ENST00000558961 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
BMP4-204ENST00000558961 EIF4G3O43432 1585 aaKnown RBP20.18■□□□□ 0.82
BMP4-204ENST00000558961 CUX1P39880 1505 aa20.16■□□□□ 0.82
BMP4-204ENST00000558961 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
BMP4-204ENST00000558961 WDR97A6NE52 1622 aa20.1■□□□□ 0.81
BMP4-204ENST00000558961 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
BMP4-204ENST00000558961 SOGA1O94964 1423 aa20.04■□□□□ 0.8
BMP4-204ENST00000558961 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.796e-9■■■■■ 52.1
BMP4-204ENST00000558961 BIVM-ERCC5R4GMW8 1640 aa20.01■□□□□ 0.79
BMP4-204ENST00000558961 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
BMP4-204ENST00000558961 CHD1O14646 1710 aa19.96■□□□□ 0.79
BMP4-204ENST00000558961 OSCARQ8IYS5 282 aa19.96■□□□□ 0.79
BMP4-204ENST00000558961 SYNJ1O43426 1573 aa19.94■□□□□ 0.78
BMP4-204ENST00000558961 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
BMP4-204ENST00000558961 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
BMP4-204ENST00000558961 ABCA5Q8WWZ7 1642 aa19.92■□□□□ 0.78
BMP4-204ENST00000558961 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
BMP4-204ENST00000558961 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
BMP4-204ENST00000558961 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
BMP4-204ENST00000558961 MAGI1Q96QZ7 1491 aaPredicted RBP19.88■□□□□ 0.77
BMP4-204ENST00000558961 SNAPC4Q5SXM2 1469 aa19.87■□□□□ 0.77
BMP4-204ENST00000558961 GAPVD1Q14C86 1478 aa19.84■□□□□ 0.77
BMP4-204ENST00000558961 RIMBP3CA6NJZ7 1639 aa19.8■□□□□ 0.76
BMP4-204ENST00000558961 RIMBP3BA6NNM3 1639 aa19.8■□□□□ 0.76
BMP4-204ENST00000558961 RIMBP3Q9UFD9 1639 aa19.8■□□□□ 0.76
BMP4-204ENST00000558961 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
BMP4-204ENST00000558961 ARHGEF11O15085 1522 aa19.75■□□□□ 0.75
BMP4-204ENST00000558961 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
BMP4-204ENST00000558961 ADAMTS12P58397 1594 aa19.72■□□□□ 0.75
BMP4-204ENST00000558961 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
BMP4-204ENST00000558961 FBLN2P98095 1184 aa19.68■□□□□ 0.74
BMP4-204ENST00000558961 CHMP7Q8WUX9 453 aaPredicted RBP19.66■□□□□ 0.74
BMP4-204ENST00000558961 GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
BMP4-204ENST00000558961 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
BMP4-204ENST00000558961 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
BMP4-204ENST00000558961 ARAP1Q96P48 1450 aa19.58■□□□□ 0.72
BMP4-204ENST00000558961 NUP160Q12769 1436 aa19.58■□□□□ 0.72
BMP4-204ENST00000558961 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
BMP4-204ENST00000558961 CUL7Q14999 1698 aa19.52■□□□□ 0.71
BMP4-204ENST00000558961 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
BMP4-204ENST00000558961 SHROOM2Q13796 1616 aa19.51■□□□□ 0.71
BMP4-204ENST00000558961 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
BMP4-204ENST00000558961 IGF1RP08069 1367 aa19.44■□□□□ 0.7
BMP4-204ENST00000558961 CYB5RLQ6IPT4 315 aa19.42■□□□□ 0.7
BMP4-204ENST00000558961 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
BMP4-204ENST00000558961 KIAA0586Q9BVV6 1533 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms