RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 NBR1Q14596 966 aa13.45□□□□□ -0.26
PSMA4-208ENST00000558639 AQRO60306 1485 aaKnown RBP eCLIP13.43□□□□□ -0.262e-7■■■■□ 26.1
PSMA4-208ENST00000558639 SUPT5HO00267 1087 aaKnown RBP13.42□□□□□ -0.26
PSMA4-208ENST00000558639 MS4A3Q96HJ5 214 aa13.42□□□□□ -0.26
PSMA4-208ENST00000558639 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
PSMA4-208ENST00000558639 CYB5RLQ6IPT4 315 aa13.41□□□□□ -0.26
PSMA4-208ENST00000558639 WDR70Q9NW82 654 aa13.4□□□□□ -0.26
PSMA4-208ENST00000558639 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
PSMA4-208ENST00000558639 PHF8Q9UPP1 1060 aa13.39□□□□□ -0.27
PSMA4-208ENST00000558639 FBXO22Q8NEZ5 403 aa13.38□□□□□ -0.27
PSMA4-208ENST00000558639 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
PSMA4-208ENST00000558639 HAX1O00165 279 aa13.37□□□□□ -0.27
PSMA4-208ENST00000558639 SOGA1O94964 1423 aa13.37□□□□□ -0.27
PSMA4-208ENST00000558639 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
PSMA4-208ENST00000558639 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
PSMA4-208ENST00000558639 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
PSMA4-208ENST00000558639 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
PSMA4-208ENST00000558639 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
PSMA4-208ENST00000558639 EIF4G3O43432 1585 aaKnown RBP13.35□□□□□ -0.27
PSMA4-208ENST00000558639 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
PSMA4-208ENST00000558639 TIE1P35590 1138 aa13.33□□□□□ -0.28
PSMA4-208ENST00000558639 CADPS2Q86UW7 1296 aa13.33□□□□□ -0.28
PSMA4-208ENST00000558639 CHMP7Q8WUX9 453 aaPredicted RBP13.33□□□□□ -0.28
PSMA4-208ENST00000558639 PPP1R37O75864 691 aa13.32□□□□□ -0.28
PSMA4-208ENST00000558639 CLCN6P51797 869 aa13.32□□□□□ -0.28
PSMA4-208ENST00000558639 P3H3Q8IVL6 736 aa13.32□□□□□ -0.28
PSMA4-208ENST00000558639 TRPC6Q9Y210 931 aa13.32□□□□□ -0.28
PSMA4-208ENST00000558639 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
PSMA4-208ENST00000558639 TARBP1Q13395 1621 aaKnown RBP13.31□□□□□ -0.28
PSMA4-208ENST00000558639 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
PSMA4-208ENST00000558639 CHD1O14646 1710 aa13.27□□□□□ -0.28
PSMA4-208ENST00000558639 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
PSMA4-208ENST00000558639 GALR2O43603 387 aaPredicted RBP13.24□□□□□ -0.29
PSMA4-208ENST00000558639 PRKCSHP14314 528 aaPredicted RBP13.24□□□□□ -0.29
PSMA4-208ENST00000558639 TPRNQ4KMQ1 711 aa13.24□□□□□ -0.29
PSMA4-208ENST00000558639 CUX1P39880 1505 aa13.23□□□□□ -0.29
PSMA4-208ENST00000558639 MS4A4AQ96JQ5 239 aa13.23□□□□□ -0.29
PSMA4-208ENST00000558639 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
PSMA4-208ENST00000558639 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
PSMA4-208ENST00000558639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.29
PSMA4-208ENST00000558639 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
PSMA4-208ENST00000558639 GRIN2BQ13224 1484 aa13.19□□□□□ -0.3
PSMA4-208ENST00000558639 EVX2Q03828 476 aa13.18□□□□□ -0.3
PSMA4-208ENST00000558639 PDE4AP27815 886 aa13.17□□□□□ -0.3
PSMA4-208ENST00000558639 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
PSMA4-208ENST00000558639 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
PSMA4-208ENST00000558639 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
PSMA4-208ENST00000558639 MAGI1Q96QZ7 1491 aaPredicted RBP13.15□□□□□ -0.3
PSMA4-208ENST00000558639 SYNJ1O43426 1573 aa13.13□□□□□ -0.31
PSMA4-208ENST00000558639 SYNJ2O15056 1496 aa13.13□□□□□ -0.31
PSMA4-208ENST00000558639 E2F4Q16254 413 aa13.13□□□□□ -0.31
PSMA4-208ENST00000558639 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
PSMA4-208ENST00000558639 WDR97A6NE52 1622 aa13.12□□□□□ -0.31
PSMA4-208ENST00000558639 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
PSMA4-208ENST00000558639 NCKAP5LQ9HCH0 1330 aa13.11□□□□□ -0.31
PSMA4-208ENST00000558639 ATN1P54259 1190 aaPredicted RBP13.09□□□□□ -0.31
PSMA4-208ENST00000558639 WRNQ14191 1432 aaPredicted RBP eCLIP13.09□□□□□ -0.31
PSMA4-208ENST00000558639 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
PSMA4-208ENST00000558639 PBRM1Q86U86 1689 aa13.08□□□□□ -0.32
PSMA4-208ENST00000558639 CLASP1Q7Z460 1538 aa13.08□□□□□ -0.32
PSMA4-208ENST00000558639 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.32
PSMA4-208ENST00000558639 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
PSMA4-208ENST00000558639 DDX27Q96GQ7 796 aaKnown RBP13.07□□□□□ -0.32
PSMA4-208ENST00000558639 CRISPLD2Q9H0B8 497 aa13.07□□□□□ -0.32
PSMA4-208ENST00000558639 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
PSMA4-208ENST00000558639 MFSD10Q14728 455 aa13.05□□□□□ -0.32
PSMA4-208ENST00000558639 IER5LQ5T953 404 aa13.05□□□□□ -0.32
PSMA4-208ENST00000558639 TULP1O00294 542 aaPredicted RBP13.04□□□□□ -0.32
PSMA4-208ENST00000558639 OCEL1Q9H607 264 aa13.03□□□□□ -0.32
PSMA4-208ENST00000558639 G3V3G9 751 aa13.02□□□□□ -0.33
PSMA4-208ENST00000558639 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.33
PSMA4-208ENST00000558639 GABBR2O75899 941 aa13.01□□□□□ -0.33
PSMA4-208ENST00000558639 DPY19L2Q6NUT2 758 aa13.01□□□□□ -0.33
PSMA4-208ENST00000558639 GRIN2AQ12879 1464 aa13□□□□□ -0.33
PSMA4-208ENST00000558639 DCBLD2Q96PD2 775 aa13□□□□□ -0.33
PSMA4-208ENST00000558639 IRX5P78411 483 aaPredicted RBP12.99□□□□□ -0.33
PSMA4-208ENST00000558639 PDCD7Q8N8D1 485 aaKnown RBP12.99□□□□□ -0.33
PSMA4-208ENST00000558639 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
PSMA4-208ENST00000558639 PLCG2P16885 1265 aa12.98□□□□□ -0.33
PSMA4-208ENST00000558639 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
PSMA4-208ENST00000558639 GPHNQ9NQX3 736 aaPredicted RBP12.98□□□□□ -0.33
PSMA4-208ENST00000558639 FHAD1B1AJZ9 1412 aa12.97□□□□□ -0.33
PSMA4-208ENST00000558639 JPH4Q96JJ6 628 aa12.97□□□□□ -0.33
PSMA4-208ENST00000558639 BIVM-ERCC5R4GMW8 1640 aa12.96□□□□□ -0.33
PSMA4-208ENST00000558639 TMC2Q8TDI7 906 aa12.95□□□□□ -0.34
PSMA4-208ENST00000558639 BOLA1Q9Y3E2 137 aa12.95□□□□□ -0.34
PSMA4-208ENST00000558639 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
PSMA4-208ENST00000558639 SEC24BO95487 1268 aa12.94□□□□□ -0.34
PSMA4-208ENST00000558639 PPP1R15BQ5SWA1 713 aa12.94□□□□□ -0.34
PSMA4-208ENST00000558639 CEP170Q5SW79 1584 aa12.94□□□□□ -0.34
PSMA4-208ENST00000558639 NUP160Q12769 1436 aa12.93□□□□□ -0.34
PSMA4-208ENST00000558639 ADAMTS12P58397 1594 aa12.93□□□□□ -0.34
PSMA4-208ENST00000558639 CAMK2BQ13554 666 aa12.92□□□□□ -0.34
PSMA4-208ENST00000558639 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
PSMA4-208ENST00000558639 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
PSMA4-208ENST00000558639 PRG4Q92954 1404 aaPredicted RBP12.91□□□□□ -0.34
PSMA4-208ENST00000558639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.91□□□□□ -0.34
PSMA4-208ENST00000558639 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
PSMA4-208ENST00000558639 ARIH1Q9Y4X5 557 aaPredicted RBP12.9□□□□□ -0.34
PSMA4-208ENST00000558639 TTBK1Q5TCY1 1321 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms