RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 BCANQ96GW7 911 aa2.9□□□□□ -1.94
CTDSPL2-202ENST00000558373 TESPA1A2RU30 521 aaPredicted RBP2.9□□□□□ -1.95
CTDSPL2-202ENST00000558373 SEC24BO95487 1268 aa2.9□□□□□ -1.95
CTDSPL2-202ENST00000558373 NPDC1Q9NQX5 325 aaPredicted RBP2.89□□□□□ -1.95
CTDSPL2-202ENST00000558373 SNPHO15079 494 aa2.89□□□□□ -1.95
CTDSPL2-202ENST00000558373 ANO8Q9HCE9 1232 aaPredicted RBP2.89□□□□□ -1.95
CTDSPL2-202ENST00000558373 ZNF469Q96JG9 3925 aaPredicted RBP2.89□□□□□ -1.95
CTDSPL2-202ENST00000558373 DCAF8L2P0C7V8 631 aa2.89□□□□□ -1.95
CTDSPL2-202ENST00000558373 ERICH6Q7L0X2 663 aa2.89□□□□□ -1.95
CTDSPL2-202ENST00000558373 HOXB1P14653 301 aaPredicted RBP2.88□□□□□ -1.95
CTDSPL2-202ENST00000558373 GSE1Q14687 1217 aa2.88□□□□□ -1.95
CTDSPL2-202ENST00000558373 RYDENQ9NUL5 291 aaKnown RBP2.88□□□□□ -1.95
CTDSPL2-202ENST00000558373 PPP1R37O75864 691 aa2.88□□□□□ -1.95
CTDSPL2-202ENST00000558373 PLCD3Q8N3E9 789 aa2.88□□□□□ -1.95
CTDSPL2-202ENST00000558373 PLCG2P16885 1265 aa2.87□□□□□ -1.95
CTDSPL2-202ENST00000558373 HAP1P54257 671 aaPredicted RBP2.87□□□□□ -1.95
CTDSPL2-202ENST00000558373 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.87□□□□□ -1.95
CTDSPL2-202ENST00000558373 MARVELD3Q96A59 401 aa2.87□□□□□ -1.95
CTDSPL2-202ENST00000558373 C1orf115Q9H7X2 142 aa2.87□□□□□ -1.95
CTDSPL2-202ENST00000558373 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.87□□□□□ -1.95
CTDSPL2-202ENST00000558373 DNAH6Q9C0G6 4158 aa2.86□□□□□ -1.95
CTDSPL2-202ENST00000558373 ECM2O94769 699 aaPredicted RBP2.86□□□□□ -1.95
CTDSPL2-202ENST00000558373 PLEKHG3A1L390 1219 aa2.85□□□□□ -1.95
CTDSPL2-202ENST00000558373 DKK1O94907 266 aa2.85□□□□□ -1.95
CTDSPL2-202ENST00000558373 NOM1Q5C9Z4 860 aaKnown RBP2.85□□□□□ -1.95
CTDSPL2-202ENST00000558373 MIER1Q8N108 512 aa2.84□□□□□ -1.95
CTDSPL2-202ENST00000558373 GPR153Q6NV75 609 aa2.84□□□□□ -1.95
CTDSPL2-202ENST00000558373 EMP3P54852 163 aa2.84□□□□□ -1.96
CTDSPL2-202ENST00000558373 PCDHB8Q9UN66 801 aa2.84□□□□□ -1.96
CTDSPL2-202ENST00000558373 DPY19L2Q6NUT2 758 aa2.83□□□□□ -1.96
CTDSPL2-202ENST00000558373 ZNF687Q8N1G0 1237 aa2.83□□□□□ -1.96
CTDSPL2-202ENST00000558373 SPRYD3Q8NCJ5 442 aa2.83□□□□□ -1.96
CTDSPL2-202ENST00000558373 ZSWIM6Q9HCJ5 1215 aa2.83□□□□□ -1.96
CTDSPL2-202ENST00000558373 L3MBTL3Q96JM7 780 aaPredicted RBP2.82□□□□□ -1.96
CTDSPL2-202ENST00000558373 POTEEQ6S8J3 1075 aa2.82□□□□□ -1.96
CTDSPL2-202ENST00000558373 FAM212AQ96EL1 285 aa2.82□□□□□ -1.96
CTDSPL2-202ENST00000558373 FAM205CA6NFA0 338 aa2.81□□□□□ -1.96
CTDSPL2-202ENST00000558373 SLC34A2O95436 690 aa2.81□□□□□ -1.96
CTDSPL2-202ENST00000558373 ANK2Q01484 3957 aa2.8□□□□□ -1.96
CTDSPL2-202ENST00000558373 RNF166Q96A37 237 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL2-202ENST00000558373 DAXXQ9UER7 740 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL2-202ENST00000558373 NBPF19A0A087WUL8 3843 aa2.8□□□□□ -1.96
CTDSPL2-202ENST00000558373 AKAP9Q99996 3911 aa2.8□□□□□ -1.96
CTDSPL2-202ENST00000558373 PYGBP11216 843 aa2.8□□□□□ -1.96
CTDSPL2-202ENST00000558373 ECM1Q16610 540 aa2.79□□□□□ -1.96
CTDSPL2-202ENST00000558373 TULP1O00294 542 aaPredicted RBP2.79□□□□□ -1.96
CTDSPL2-202ENST00000558373 PHOX2BQ99453 314 aa2.79□□□□□ -1.96
CTDSPL2-202ENST00000558373 CIZ1Q9ULV3 898 aaPredicted RBP2.79□□□□□ -1.96
CTDSPL2-202ENST00000558373 BOLA1Q9Y3E2 137 aa2.79□□□□□ -1.96
CTDSPL2-202ENST00000558373 NBR1Q14596 966 aa2.78□□□□□ -1.96
CTDSPL2-202ENST00000558373 PAXIP1Q6ZW49 1069 aaPredicted RBP2.78□□□□□ -1.96
CTDSPL2-202ENST00000558373 EMILIN3Q9NT22 766 aa2.78□□□□□ -1.96
CTDSPL2-202ENST00000558373 POTEAQ6S8J7 498 aa2.78□□□□□ -1.96
CTDSPL2-202ENST00000558373 GOPCQ9HD26 462 aa2.78□□□□□ -1.96
CTDSPL2-202ENST00000558373 PSEN1P49768 467 aa2.78□□□□□ -1.96
CTDSPL2-202ENST00000558373 ZNF467Q7Z7K2 595 aaPredicted RBP2.78□□□□□ -1.96
CTDSPL2-202ENST00000558373 KCNV2Q8TDN2 545 aa2.78□□□□□ -1.96
CTDSPL2-202ENST00000558373 VGFO15240 615 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL2-202ENST00000558373 IFFO2Q5TF58 517 aa2.77□□□□□ -1.97
CTDSPL2-202ENST00000558373 CFAP44Q96MT7 982 aa2.77□□□□□ -1.97
CTDSPL2-202ENST00000558373 BRPF1P55201 1214 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL2-202ENST00000558373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.77□□□□□ -1.977e-7■■■□□ 19
CTDSPL2-202ENST00000558373 TSHZ2Q9NRE2 1034 aa2.76□□□□□ -1.97
CTDSPL2-202ENST00000558373 MYT1LQ9UL68 1186 aa2.76□□□□□ -1.97
CTDSPL2-202ENST00000558373 DCAF8Q5TAQ9 597 aa2.76□□□□□ -1.97
CTDSPL2-202ENST00000558373 C3orf80F5H4A9 247 aa2.76□□□□□ -1.97
CTDSPL2-202ENST00000558373 DOK7Q18PE1 504 aa2.76□□□□□ -1.97
CTDSPL2-202ENST00000558373 RIOK3O14730 519 aaKnown RBP2.76□□□□□ -1.97
CTDSPL2-202ENST00000558373 HRO43593 1189 aa2.75□□□□□ -1.97
CTDSPL2-202ENST00000558373 TUSC1Q2TAM9 212 aa2.75□□□□□ -1.97
CTDSPL2-202ENST00000558373 C3orf67Q6ZVT6 689 aa2.75□□□□□ -1.97
CTDSPL2-202ENST00000558373 OSBPP22059 807 aa2.75□□□□□ -1.97
CTDSPL2-202ENST00000558373 VARS2Q5ST30 1063 aaKnown RBP2.75□□□□□ -1.97
CTDSPL2-202ENST00000558373 P3H3Q8IVL6 736 aa2.75□□□□□ -1.97
CTDSPL2-202ENST00000558373 PDAP1Q13442 181 aaKnown RBP2.74□□□□□ -1.97
CTDSPL2-202ENST00000558373 MICALL2Q8IY33 904 aa2.74□□□□□ -1.97
CTDSPL2-202ENST00000558373 TIMELESSQ9UNS1 1208 aa2.74□□□□□ -1.97
CTDSPL2-202ENST00000558373 AMHR2Q16671 573 aa2.74□□□□□ -1.97
CTDSPL2-202ENST00000558373 CHGAP10645 457 aaKnown RBP2.74□□□□□ -1.97
CTDSPL2-202ENST00000558373 LDLRAD1Q5T700 205 aa2.74□□□□□ -1.97
CTDSPL2-202ENST00000558373 CHIC2Q9UKJ5 165 aa2.74□□□□□ -1.97
CTDSPL2-202ENST00000558373 HRCP23327 699 aa2.73□□□□□ -1.97
CTDSPL2-202ENST00000558373 REPIN1Q9BWE0 567 aaKnown RBP2.73□□□□□ -1.97
CTDSPL2-202ENST00000558373 ILDR2Q71H61 639 aa2.73□□□□□ -1.97
CTDSPL2-202ENST00000558373 PRKCSHP14314 528 aaPredicted RBP2.73□□□□□ -1.97
CTDSPL2-202ENST00000558373 MKRN3Q13064 507 aaKnown RBP2.73□□□□□ -1.97
CTDSPL2-202ENST00000558373 WDR70Q9NW82 654 aa2.73□□□□□ -1.97
CTDSPL2-202ENST00000558373 ERBB3P21860 1342 aa2.73□□□□□ -1.97
CTDSPL2-202ENST00000558373 LSM11P83369 360 aaKnown RBP eCLIP2.73□□□□□ -1.97
CTDSPL2-202ENST00000558373 RGS20O76081 388 aa2.72□□□□□ -1.97
CTDSPL2-202ENST00000558373 ZNF316A6NFI3 1004 aaPredicted RBP2.71□□□□□ -1.97
CTDSPL2-202ENST00000558373 IGHA2P01877 340 aa2.71□□□□□ -1.98
CTDSPL2-202ENST00000558373 PBX2P40425 430 aa2.71□□□□□ -1.98
CTDSPL2-202ENST00000558373 PDIA6Q15084 440 aa2.71□□□□□ -1.98
CTDSPL2-202ENST00000558373 BHMG1C9JSJ3 638 aaPredicted RBP2.71□□□□□ -1.98
CTDSPL2-202ENST00000558373 SMYD5Q6GMV2 418 aa2.71□□□□□ -1.98
CTDSPL2-202ENST00000558373 KHSRPQ92945 711 aaKnown RBP eCLIP2.71□□□□□ -1.984e-7■■■■□ 20.5
CTDSPL2-202ENST00000558373 SOX12O15370 315 aa2.7□□□□□ -1.98
CTDSPL2-202ENST00000558373 LCE2BO14633 110 aa2.7□□□□□ -1.98
CTDSPL2-202ENST00000558373 ARSIQ5FYB1 569 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms