RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 SHROOM4Q9ULL8 1493 aa11.12□□□□□ -0.63
HNRNPC-233ENST00000557768 SLAIN1Q8ND83 568 aa11.11□□□□□ -0.63
HNRNPC-233ENST00000557768 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
HNRNPC-233ENST00000557768 CECR2Q9BXF3 1484 aa11.1□□□□□ -0.63
HNRNPC-233ENST00000557768 EIF4G1Q04637 1599 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-233ENST00000557768 PPP1R37O75864 691 aa11.08□□□□□ -0.64
HNRNPC-233ENST00000557768 TMEM121BQ9BXQ6 578 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-233ENST00000557768 BBXQ8WY36 941 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-233ENST00000557768 RYDENQ9NUL5 291 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-233ENST00000557768 GTPBP6O43824 516 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-233ENST00000557768 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
HNRNPC-233ENST00000557768 TMEM92Q6UXU6 159 aa10.98□□□□□ -0.65
HNRNPC-233ENST00000557768 SPRYD3Q8NCJ5 442 aa10.94□□□□□ -0.66
HNRNPC-233ENST00000557768 FAM163AQ96GL9 167 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-233ENST00000557768 CFAP44Q96MT7 982 aa10.94□□□□□ -0.66
HNRNPC-233ENST00000557768 PAXIP1Q6ZW49 1069 aaPredicted RBP10.93□□□□□ -0.66
HNRNPC-233ENST00000557768 C2orf72A6NCS6 295 aa10.9□□□□□ -0.66
HNRNPC-233ENST00000557768 SNPHO15079 494 aa10.9□□□□□ -0.66
HNRNPC-233ENST00000557768 TMC2Q8TDI7 906 aa10.9□□□□□ -0.66
HNRNPC-233ENST00000557768 KIF3CO14782 793 aa10.85□□□□□ -0.67
HNRNPC-233ENST00000557768 ST18O60284 1047 aa10.83□□□□□ -0.68
HNRNPC-233ENST00000557768 PLCB2Q00722 1185 aa10.83□□□□□ -0.68
HNRNPC-233ENST00000557768 HOXB3P14651 431 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-233ENST00000557768 DOK7Q18PE1 504 aa10.81□□□□□ -0.68
HNRNPC-233ENST00000557768 LCE2DQ5TA82 110 aaPredicted RBP10.81□□□□□ -0.68
HNRNPC-233ENST00000557768 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
HNRNPC-233ENST00000557768 GPHNQ9NQX3 736 aaPredicted RBP10.81□□□□□ -0.68
HNRNPC-233ENST00000557768 CADPS2Q86UW7 1296 aa10.8□□□□□ -0.68
HNRNPC-233ENST00000557768 PDE4AP27815 886 aa10.78□□□□□ -0.68
HNRNPC-233ENST00000557768 DSG2Q14126 1118 aa10.78□□□□□ -0.68
HNRNPC-233ENST00000557768 CRISPLD2Q9H0B8 497 aa10.78□□□□□ -0.68
HNRNPC-233ENST00000557768 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
HNRNPC-233ENST00000557768 RIMBP2O15034 1052 aa10.77□□□□□ -0.69
HNRNPC-233ENST00000557768 LARP6Q9BRS8 491 aaKnown RBP10.77□□□□□ -0.69
HNRNPC-233ENST00000557768 FOXK1P85037 733 aa10.76□□□□□ -0.69
HNRNPC-233ENST00000557768 PLPP6Q8IY26 295 aa10.76□□□□□ -0.69
HNRNPC-233ENST00000557768 MARVELD3Q96A59 401 aa10.74□□□□□ -0.69
HNRNPC-233ENST00000557768 TSHZ2Q9NRE2 1034 aa10.74□□□□□ -0.69
HNRNPC-233ENST00000557768 POTEMA6NI47 508 aa10.73□□□□□ -0.69
HNRNPC-233ENST00000557768 POTEGQ6S5H5 508 aa10.73□□□□□ -0.69
HNRNPC-233ENST00000557768 PPP1R15BQ5SWA1 713 aa10.72□□□□□ -0.69
HNRNPC-233ENST00000557768 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
HNRNPC-233ENST00000557768 DDX27Q96GQ7 796 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-233ENST00000557768 ARSIQ5FYB1 569 aa10.7□□□□□ -0.7
HNRNPC-233ENST00000557768 EMP3P54852 163 aa10.69□□□□□ -0.7
HNRNPC-233ENST00000557768 HOXB1P14653 301 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-233ENST00000557768 KHSRPQ92945 711 aaKnown RBP eCLIP10.68□□□□□ -0.71e-9■■□□□ 12.1
HNRNPC-233ENST00000557768 ZSWIM6Q9HCJ5 1215 aa10.68□□□□□ -0.7
HNRNPC-233ENST00000557768 GPR153Q6NV75 609 aa10.67□□□□□ -0.7
HNRNPC-233ENST00000557768 SLC34A2O95436 690 aa10.66□□□□□ -0.7
HNRNPC-233ENST00000557768 MFSD10Q14728 455 aa10.66□□□□□ -0.7
HNRNPC-233ENST00000557768 UPF1Q92900 1129 aaKnown RBP eCLIP10.66□□□□□ -0.7
HNRNPC-233ENST00000557768 PCDHGA4Q9Y5G9 962 aa10.66□□□□□ -0.7
HNRNPC-233ENST00000557768 NCAPD3P42695 1498 aa10.64□□□□□ -0.71
HNRNPC-233ENST00000557768 CUX2O14529 1486 aa10.63□□□□□ -0.71
HNRNPC-233ENST00000557768 ERCC6Q03468 1493 aa10.63□□□□□ -0.71
HNRNPC-233ENST00000557768 FAM205CA6NFA0 338 aa10.63□□□□□ -0.71
HNRNPC-233ENST00000557768 NUDT7P0C024 238 aa10.62□□□□□ -0.71
HNRNPC-233ENST00000557768 PTCD2Q8WV60 388 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-233ENST00000557768 SMARCA4P51532 1647 aa10.62□□□□□ -0.71
HNRNPC-233ENST00000557768 ERBB3P21860 1342 aa10.61□□□□□ -0.71
HNRNPC-233ENST00000557768 WDR70Q9NW82 654 aa10.61□□□□□ -0.71
HNRNPC-233ENST00000557768 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
HNRNPC-233ENST00000557768 TBC1D12O60347 775 aa10.6□□□□□ -0.71
HNRNPC-233ENST00000557768 SMARCA2P51531 1590 aa10.58□□□□□ -0.72
HNRNPC-233ENST00000557768 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
HNRNPC-233ENST00000557768 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.72
HNRNPC-233ENST00000557768 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
HNRNPC-233ENST00000557768 EMILIN3Q9NT22 766 aa10.57□□□□□ -0.72
HNRNPC-233ENST00000557768 NESP48681 1621 aa10.57□□□□□ -0.72
HNRNPC-233ENST00000557768 POTEB3A0JP26 581 aa10.56□□□□□ -0.72
HNRNPC-233ENST00000557768 VARS2Q5ST30 1063 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-233ENST00000557768 POTEBQ6S5H4 581 aa10.56□□□□□ -0.72
HNRNPC-233ENST00000557768 MAP3K9P80192 1104 aa10.55□□□□□ -0.72
HNRNPC-233ENST00000557768 BCANQ96GW7 911 aa10.55□□□□□ -0.72
HNRNPC-233ENST00000557768 ZNF316A6NFI3 1004 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-233ENST00000557768 CDAN1Q8IWY9 1227 aa10.54□□□□□ -0.72
HNRNPC-233ENST00000557768 LHX6Q9UPM6 363 aa10.54□□□□□ -0.72
HNRNPC-233ENST00000557768 CAMK2BQ13554 666 aa10.53□□□□□ -0.72
HNRNPC-233ENST00000557768 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
HNRNPC-233ENST00000557768 VSIG10Q8N0Z9 540 aa10.52□□□□□ -0.73
HNRNPC-233ENST00000557768 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-233ENST00000557768 BAZ1BQ9UIG0 1483 aaKnown RBP10.51□□□□□ -0.73
HNRNPC-233ENST00000557768 E2F4Q16254 413 aa10.51□□□□□ -0.73
HNRNPC-233ENST00000557768 KDM4FA0A1W2PPD8 638 aa10.5□□□□□ -0.73
HNRNPC-233ENST00000557768 DPYSL4O14531 572 aa10.5□□□□□ -0.73
HNRNPC-233ENST00000557768 THOC2Q8NI27 1593 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-233ENST00000557768 KIF21AQ7Z4S6 1674 aa10.5□□□□□ -0.73
HNRNPC-233ENST00000557768 EVI5O60447 810 aa10.49□□□□□ -0.73
HNRNPC-233ENST00000557768 PEG3Q9GZU2 1588 aa10.48□□□□□ -0.73
HNRNPC-233ENST00000557768 PCDH10Q9P2E7 1040 aa10.48□□□□□ -0.73
HNRNPC-233ENST00000557768 LAMC3Q9Y6N6 1575 aa10.46□□□□□ -0.74
HNRNPC-233ENST00000557768 MROH2BQ7Z745 1585 aa10.45□□□□□ -0.74
HNRNPC-233ENST00000557768 PRKCSHP14314 528 aaPredicted RBP10.44□□□□□ -0.74
HNRNPC-233ENST00000557768 ZNF687Q8N1G0 1237 aa10.44□□□□□ -0.74
HNRNPC-233ENST00000557768 ANO8Q9HCE9 1232 aaPredicted RBP10.43□□□□□ -0.74
HNRNPC-233ENST00000557768 PSDA5PKW4 1024 aaPredicted RBP10.42□□□□□ -0.74
HNRNPC-233ENST00000557768 ZNF454Q8N9F8 522 aa10.42□□□□□ -0.74
HNRNPC-233ENST00000557768 PPP4R3BQ5MIZ7 849 aa10.41□□□□□ -0.74
HNRNPC-233ENST00000557768 KCNV2Q8TDN2 545 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms