RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 FANCAO15360 1455 aa19.22■□□□□ 0.67
RCCD1-209ENST00000557750 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
RCCD1-209ENST00000557750 RICTORQ6R327 1708 aa19.22■□□□□ 0.67
RCCD1-209ENST00000557750 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.21■□□□□ 0.67
RCCD1-209ENST00000557750 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
RCCD1-209ENST00000557750 RIMS1Q86UR5 1692 aaKnown RBP19.19■□□□□ 0.66
RCCD1-209ENST00000557750 TTC37Q6PGP7 1564 aa19.18■□□□□ 0.66
RCCD1-209ENST00000557750 CFAP74Q9C0B2 1584 aa19.18■□□□□ 0.66
RCCD1-209ENST00000557750 TIAM1Q13009 1591 aa19.17■□□□□ 0.66
RCCD1-209ENST00000557750 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
RCCD1-209ENST00000557750 YEATS2Q9ULM3 1422 aa19.17■□□□□ 0.66
RCCD1-209ENST00000557750 HSPA2P54652 639 aa19.15■□□□□ 0.66
RCCD1-209ENST00000557750 ZMYM4Q5VZL5 1548 aa19.15■□□□□ 0.66
RCCD1-209ENST00000557750 POGZQ7Z3K3 1410 aa19.14■□□□□ 0.66
RCCD1-209ENST00000557750 ZFYVE16Q7Z3T8 1539 aa19.14■□□□□ 0.66
RCCD1-209ENST00000557750 KIF14Q15058 1648 aa19.14■□□□□ 0.65
RCCD1-209ENST00000557750 MAP3K1Q13233 1512 aa19.14■□□□□ 0.65
RCCD1-209ENST00000557750 SIGLEC1Q9BZZ2 1709 aa19.13■□□□□ 0.65
RCCD1-209ENST00000557750 MLECQ14165 292 aa19.12■□□□□ 0.65
RCCD1-209ENST00000557750 EHBP1L1Q8N3D4 1523 aa19.12■□□□□ 0.65
RCCD1-209ENST00000557750 MAGI2Q86UL8 1455 aa19.11■□□□□ 0.65
RCCD1-209ENST00000557750 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
RCCD1-209ENST00000557750 LRRC9Q6ZRR7 1453 aa19.11■□□□□ 0.65
RCCD1-209ENST00000557750 SCAPERQ9BY12 1400 aa19.1■□□□□ 0.65
RCCD1-209ENST00000557750 PLCH2O75038 1416 aa19.1■□□□□ 0.65
RCCD1-209ENST00000557750 EFCAB2Q5VUJ9 269 aa19.04■□□□□ 0.64
RCCD1-209ENST00000557750 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
RCCD1-209ENST00000557750 ATP10AO60312 1499 aa19.03■□□□□ 0.64
RCCD1-209ENST00000557750 NCOA2Q15596 1464 aa19.03■□□□□ 0.64
RCCD1-209ENST00000557750 FER1L4A9Z1Z3 1794 aa19.02■□□□□ 0.64
RCCD1-209ENST00000557750 SUPT6HQ7KZ85 1726 aaKnown RBP19.01■□□□□ 0.63
RCCD1-209ENST00000557750 ARHGEF12Q9NZN5 1544 aa19■□□□□ 0.63
RCCD1-209ENST00000557750 C9orf84Q5VXU9 1444 aa19■□□□□ 0.63
RCCD1-209ENST00000557750 CERKQ8TCT0 537 aa19■□□□□ 0.63
RCCD1-209ENST00000557750 ARHGAP5Q13017 1502 aa19■□□□□ 0.63
RCCD1-209ENST00000557750 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
RCCD1-209ENST00000557750 GPATCH8Q9UKJ3 1502 aaKnown RBP18.99■□□□□ 0.63
RCCD1-209ENST00000557750 CEBPAP49715 358 aaPredicted RBP18.98■□□□□ 0.63
RCCD1-209ENST00000557750 MYO5CQ9NQX4 1742 aa18.98■□□□□ 0.63
RCCD1-209ENST00000557750 CFDP1Q9UEE9 299 aaPredicted RBP18.98■□□□□ 0.63
RCCD1-209ENST00000557750 AFAP1Q8N556 730 aa18.96■□□□□ 0.63
RCCD1-209ENST00000557750 ZNF777Q9ULD5 760 aaPredicted RBP18.96■□□□□ 0.63
RCCD1-209ENST00000557750 PREX2Q70Z35 1606 aa18.94■□□□□ 0.62
RCCD1-209ENST00000557750 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
RCCD1-209ENST00000557750 CDC42BPAQ5VT25 1732 aa18.92■□□□□ 0.62
RCCD1-209ENST00000557750 MYT1LQ9UL68 1186 aa18.92■□□□□ 0.62
RCCD1-209ENST00000557750 PREX1Q8TCU6 1659 aa18.91■□□□□ 0.62
RCCD1-209ENST00000557750 KDM5CP41229 1560 aa18.91■□□□□ 0.62
RCCD1-209ENST00000557750 CDC42BPBQ9Y5S2 1711 aa18.9■□□□□ 0.62
RCCD1-209ENST00000557750 MYOM3Q5VTT5 1437 aa18.89■□□□□ 0.61
RCCD1-209ENST00000557750 ITSN2Q9NZM3 1697 aa18.89■□□□□ 0.61
RCCD1-209ENST00000557750 DIP2CQ9Y2E4 1556 aa18.87■□□□□ 0.61
RCCD1-209ENST00000557750 ZNF644Q9H582 1327 aaPredicted RBP18.87■□□□□ 0.61
RCCD1-209ENST00000557750 DMRT2Q9Y5R5 561 aa18.86■□□□□ 0.61
RCCD1-209ENST00000557750 UHRF1BP1Q6BDS2 1440 aa18.86■□□□□ 0.61
RCCD1-209ENST00000557750 MLH3Q9UHC1 1453 aa18.85■□□□□ 0.61
RCCD1-209ENST00000557750 STRCQ7RTU9 1775 aa18.85■□□□□ 0.61
RCCD1-209ENST00000557750 MIA2Q96PC5 1412 aa18.85■□□□□ 0.61
RCCD1-209ENST00000557750 SAMD9LQ8IVG5 1584 aa18.84■□□□□ 0.61
RCCD1-209ENST00000557750 TRAPPC8Q9Y2L5 1435 aa18.84■□□□□ 0.61
RCCD1-209ENST00000557750 PLEKHH2Q8IVE3 1493 aa18.84■□□□□ 0.61
RCCD1-209ENST00000557750 ABCC1P33527 1531 aa18.84■□□□□ 0.61
RCCD1-209ENST00000557750 REREQ9P2R6 1566 aa18.84■□□□□ 0.61
RCCD1-209ENST00000557750 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.61
RCCD1-209ENST00000557750 ABCA6Q8N139 1617 aa18.83■□□□□ 0.61
RCCD1-209ENST00000557750 SETD1BQ9UPS6 1966 aaKnown RBP18.82■□□□□ 0.6
RCCD1-209ENST00000557750 CAMSAP2Q08AD1 1489 aa18.82■□□□□ 0.6
RCCD1-209ENST00000557750 FGD6Q6ZV73 1430 aa18.82■□□□□ 0.6
RCCD1-209ENST00000557750 KIAA1107Q9UPP5 1409 aa18.82■□□□□ 0.6
RCCD1-209ENST00000557750 SYCP2Q9BX26 1530 aa18.81■□□□□ 0.6
RCCD1-209ENST00000557750 AGLP35573 1532 aa18.8■□□□□ 0.6
RCCD1-209ENST00000557750 ESF1Q9H501 851 aaKnown RBP18.79■□□□□ 0.6
RCCD1-209ENST00000557750 C3P01024 1663 aa18.79■□□□□ 0.6
RCCD1-209ENST00000557750 PTPRTO14522 1441 aa18.76■□□□□ 0.59
RCCD1-209ENST00000557750 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
RCCD1-209ENST00000557750 PTPN23Q9H3S7 1636 aa18.75■□□□□ 0.59
RCCD1-209ENST00000557750 MBD5Q9P267 1494 aa18.75■□□□□ 0.59
RCCD1-209ENST00000557750 KIDINS220Q9ULH0 1771 aa18.74■□□□□ 0.59
RCCD1-209ENST00000557750 RSPH4AQ5TD94 716 aa18.73■□□□□ 0.59
RCCD1-209ENST00000557750 SPAG9O60271 1321 aaKnown RBP18.73■□□□□ 0.59
RCCD1-209ENST00000557750 TCOF1Q13428 1488 aaKnown RBP18.73■□□□□ 0.59
RCCD1-209ENST00000557750 CNTLNQ9NXG0 1405 aa18.72■□□□□ 0.59
RCCD1-209ENST00000557750 CCDC141Q6ZP82 1450 aa18.72■□□□□ 0.59
RCCD1-209ENST00000557750 DISP3Q9P2K9 1392 aa18.72■□□□□ 0.59
RCCD1-209ENST00000557750 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
RCCD1-209ENST00000557750 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
RCCD1-209ENST00000557750 ILDR2Q71H61 639 aa18.7■□□□□ 0.58
RCCD1-209ENST00000557750 NCOA1Q15788 1441 aa18.7■□□□□ 0.58
RCCD1-209ENST00000557750 ARHGEF5Q12774 1597 aa18.68■□□□□ 0.58
RCCD1-209ENST00000557750 LTBP4Q8N2S1 1624 aa18.68■□□□□ 0.58
RCCD1-209ENST00000557750 ZMYM3Q14202 1370 aa18.67■□□□□ 0.58
RCCD1-209ENST00000557750 RRBP1Q9P2E9 1410 aaKnown RBP18.66■□□□□ 0.58
RCCD1-209ENST00000557750 ABCC5O15440 1437 aa18.65■□□□□ 0.58
RCCD1-209ENST00000557750 NPATQ14207 1427 aa18.65■□□□□ 0.58
RCCD1-209ENST00000557750 DAPK1P53355 1430 aa18.65■□□□□ 0.58
RCCD1-209ENST00000557750 ATP7AQ04656 1500 aa18.63■□□□□ 0.57
RCCD1-209ENST00000557750 CAMSAP1Q5T5Y3 1602 aa18.63■□□□□ 0.57
RCCD1-209ENST00000557750 MROH2AA6NES4 1674 aa18.63■□□□□ 0.57
RCCD1-209ENST00000557750 RTEL1-TNFRSF6BF6WH68 1400 aa18.63■□□□□ 0.57
RCCD1-209ENST00000557750 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms