RNA–Protein interactions for RNA: ENST00000557597.5

NUMB-229, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUMB, Length 3,547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-229ENST00000557597 NUP153P49790 1475 aaKnown RBP10.12□□□□□ -0.79
NUMB-229ENST00000557597 ZFYVE16Q7Z3T8 1539 aa10.12□□□□□ -0.79
NUMB-229ENST00000557597 RIMS1Q86UR5 1692 aaKnown RBP10.11□□□□□ -0.79
NUMB-229ENST00000557597 TTC37Q6PGP7 1564 aa10.11□□□□□ -0.79
NUMB-229ENST00000557597 LMTK3Q96Q04 1460 aa10.11□□□□□ -0.79
NUMB-229ENST00000557597 CSRNP3Q8WYN3 585 aa10.1□□□□□ -0.79
NUMB-229ENST00000557597 REREQ9P2R6 1566 aa10.08□□□□□ -0.8
NUMB-229ENST00000557597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.08□□□□□ -0.8
NUMB-229ENST00000557597 FER1L4A9Z1Z3 1794 aa10.08□□□□□ -0.8
NUMB-229ENST00000557597 PLEKHD1A6NEE1 506 aa10.08□□□□□ -0.8
NUMB-229ENST00000557597 PREX1Q8TCU6 1659 aa10.07□□□□□ -0.8
NUMB-229ENST00000557597 SUPT16HQ9Y5B9 1047 aaKnown RBP10.07□□□□□ -0.8
NUMB-229ENST00000557597 HECW1Q76N89 1606 aa10.07□□□□□ -0.8
NUMB-229ENST00000557597 MYO5CQ9NQX4 1742 aa10.06□□□□□ -0.8
NUMB-229ENST00000557597 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
NUMB-229ENST00000557597 ARHGEF12Q9NZN5 1544 aa10.06□□□□□ -0.8
NUMB-229ENST00000557597 C9orf84Q5VXU9 1444 aa10.05□□□□□ -0.8
NUMB-229ENST00000557597 PLCH2O75038 1416 aa10.05□□□□□ -0.8
NUMB-229ENST00000557597 ATP10AO60312 1499 aa10.04□□□□□ -0.8
NUMB-229ENST00000557597 FMN1Q68DA7 1419 aa10.04□□□□□ -0.8
NUMB-229ENST00000557597 ARID4BQ4LE39 1312 aaPredicted RBP10.03□□□□□ -0.8
NUMB-229ENST00000557597 IQSEC2Q5JU85 1478 aa10.03□□□□□ -0.8
NUMB-229ENST00000557597 RAPGEF3O95398 923 aa10.03□□□□□ -0.8
NUMB-229ENST00000557597 KDM5CP41229 1560 aa10.02□□□□□ -0.81
NUMB-229ENST00000557597 KIF14Q15058 1648 aa10.02□□□□□ -0.81
NUMB-229ENST00000557597 DMRT2Q9Y5R5 561 aa10.02□□□□□ -0.81
NUMB-229ENST00000557597 ZNF518AQ6AHZ1 1483 aa10.01□□□□□ -0.81
NUMB-229ENST00000557597 HNRNPUL2Q1KMD3 747 aaKnown RBP10.01□□□□□ -0.81
NUMB-229ENST00000557597 BCANQ96GW7 911 aa10.01□□□□□ -0.81
NUMB-229ENST00000557597 CDK11AQ9UQ88 783 aaPredicted RBP10.01□□□□□ -0.81
NUMB-229ENST00000557597 AGLP35573 1532 aa10.01□□□□□ -0.81
NUMB-229ENST00000557597 CLIP1P30622 1438 aa10□□□□□ -0.81
NUMB-229ENST00000557597 SETD1BQ9UPS6 1966 aaKnown RBP9.99□□□□□ -0.81
NUMB-229ENST00000557597 PTPRTO14522 1441 aa9.98□□□□□ -0.81
NUMB-229ENST00000557597 SCAPERQ9BY12 1400 aa9.98□□□□□ -0.81
NUMB-229ENST00000557597 EFCAB2Q5VUJ9 269 aa9.98□□□□□ -0.81
NUMB-229ENST00000557597 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
NUMB-229ENST00000557597 CNTLNQ9NXG0 1405 aa9.97□□□□□ -0.81
NUMB-229ENST00000557597 YEATS2Q9ULM3 1422 aa9.97□□□□□ -0.81
NUMB-229ENST00000557597 MLH3Q9UHC1 1453 aa9.97□□□□□ -0.81
NUMB-229ENST00000557597 MROH2AA6NES4 1674 aa9.97□□□□□ -0.81
NUMB-229ENST00000557597 SIGLEC1Q9BZZ2 1709 aa9.97□□□□□ -0.81
NUMB-229ENST00000557597 CERKQ8TCT0 537 aa9.96□□□□□ -0.81
NUMB-229ENST00000557597 TROQ12816 1431 aaPredicted RBP9.96□□□□□ -0.81
NUMB-229ENST00000557597 CCDC18Q5T9S5 1454 aa9.96□□□□□ -0.81
NUMB-229ENST00000557597 UHRF1BP1Q6BDS2 1440 aa9.95□□□□□ -0.82
NUMB-229ENST00000557597 PREX2Q70Z35 1606 aa9.95□□□□□ -0.82
NUMB-229ENST00000557597 DIP2CQ9Y2E4 1556 aa9.95□□□□□ -0.82
NUMB-229ENST00000557597 ITSN2Q9NZM3 1697 aa9.94□□□□□ -0.82
NUMB-229ENST00000557597 CDK13Q14004 1512 aaKnown RBP9.94□□□□□ -0.82
NUMB-229ENST00000557597 PRKCSHP14314 528 aaPredicted RBP9.94□□□□□ -0.82
NUMB-229ENST00000557597 ARHGAP5Q13017 1502 aa9.93□□□□□ -0.82
NUMB-229ENST00000557597 ARID3CA6NKF2 412 aa9.93□□□□□ -0.82
NUMB-229ENST00000557597 NPATQ14207 1427 aa9.93□□□□□ -0.82
NUMB-229ENST00000557597 ABCC1P33527 1531 aa9.92□□□□□ -0.82
NUMB-229ENST00000557597 STRCQ7RTU9 1775 aa9.92□□□□□ -0.82
NUMB-229ENST00000557597 CLSPNQ9HAW4 1339 aa9.92□□□□□ -0.82
NUMB-229ENST00000557597 C3P01024 1663 aa9.91□□□□□ -0.82
NUMB-229ENST00000557597 CDC42BPBQ9Y5S2 1711 aa9.91□□□□□ -0.82
NUMB-229ENST00000557597 ABCA6Q8N139 1617 aa9.91□□□□□ -0.82
NUMB-229ENST00000557597 FAM135AQ9P2D6 1515 aa9.91□□□□□ -0.82
NUMB-229ENST00000557597 PLEKHH2Q8IVE3 1493 aa9.9□□□□□ -0.82
NUMB-229ENST00000557597 ARHGAP35Q9NRY4 1499 aa9.9□□□□□ -0.82
NUMB-229ENST00000557597 TRAPPC8Q9Y2L5 1435 aa9.9□□□□□ -0.83
NUMB-229ENST00000557597 ZNF142P52746 1687 aaPredicted RBP9.89□□□□□ -0.83
NUMB-229ENST00000557597 CASKIN1Q8WXD9 1431 aa9.88□□□□□ -0.83
NUMB-229ENST00000557597 SLC24A1O60721 1099 aa9.88□□□□□ -0.83
NUMB-229ENST00000557597 PLA2R1Q13018 1463 aa9.87□□□□□ -0.83
NUMB-229ENST00000557597 FYCO1Q9BQS8 1478 aa9.87□□□□□ -0.83
NUMB-229ENST00000557597 PPP6R1Q9UPN7 881 aa9.87□□□□□ -0.83
NUMB-229ENST00000557597 NCOA1Q15788 1441 aa9.86□□□□□ -0.83
NUMB-229ENST00000557597 KIDINS220Q9ULH0 1771 aa9.86□□□□□ -0.83
NUMB-229ENST00000557597 SPATA31D1Q6ZQQ2 1576 aa9.86□□□□□ -0.83
NUMB-229ENST00000557597 LRRIQ1Q96JM4 1722 aa9.86□□□□□ -0.83
NUMB-229ENST00000557597 CDC42BPAQ5VT25 1732 aa9.86□□□□□ -0.83
NUMB-229ENST00000557597 HSPA2P54652 639 aa9.86□□□□□ -0.83
NUMB-229ENST00000557597 LTBP4Q8N2S1 1624 aa9.85□□□□□ -0.83
NUMB-229ENST00000557597 FKBP8Q14318 412 aa9.85□□□□□ -0.83
NUMB-229ENST00000557597 ESF1Q9H501 851 aaKnown RBP9.85□□□□□ -0.83
NUMB-229ENST00000557597 KIAA1107Q9UPP5 1409 aa9.85□□□□□ -0.83
NUMB-229ENST00000557597 ADGBQ8N7X0 1667 aa9.84□□□□□ -0.83
NUMB-229ENST00000557597 SAMD9LQ8IVG5 1584 aa9.84□□□□□ -0.83
NUMB-229ENST00000557597 PLXNC1O60486 1568 aa9.84□□□□□ -0.83
NUMB-229ENST00000557597 RBM19Q9Y4C8 960 aaKnown RBP9.83□□□□□ -0.84
NUMB-229ENST00000557597 ERICH6Q7L0X2 663 aa9.83□□□□□ -0.84
NUMB-229ENST00000557597 INO80Q9ULG1 1556 aaPredicted RBP9.83□□□□□ -0.84
NUMB-229ENST00000557597 UBTFP17480 764 aaKnown RBP9.83□□□□□ -0.84
NUMB-229ENST00000557597 MLECQ14165 292 aa9.82□□□□□ -0.84
NUMB-229ENST00000557597 ITGAEP38570 1179 aa9.82□□□□□ -0.84
NUMB-229ENST00000557597 SOCS7O14512 581 aa9.81□□□□□ -0.84
NUMB-229ENST00000557597 PKD2Q13563 968 aa9.81□□□□□ -0.84
NUMB-229ENST00000557597 MYO3AQ8NEV4 1616 aa9.81□□□□□ -0.84
NUMB-229ENST00000557597 ATP7AQ04656 1500 aa9.8□□□□□ -0.84
NUMB-229ENST00000557597 CAMSAP1Q5T5Y3 1602 aa9.8□□□□□ -0.84
NUMB-229ENST00000557597 SUPT6HQ7KZ85 1726 aaKnown RBP9.8□□□□□ -0.84
NUMB-229ENST00000557597 NEFLP07196 543 aa9.79□□□□□ -0.84
NUMB-229ENST00000557597 CEP162Q5TB80 1403 aa9.79□□□□□ -0.84
NUMB-229ENST00000557597 RTEL1-TNFRSF6BF6WH68 1400 aa9.78□□□□□ -0.84
NUMB-229ENST00000557597 CEP170BQ9Y4F5 1589 aaPredicted RBP9.78□□□□□ -0.84
NUMB-229ENST00000557597 AFAP1Q8N556 730 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms