RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.32■■□□□ 1.64
TUBB3-214ENST00000557490 LRRIQ1Q96JM4 1722 aa25.3■■□□□ 1.64
TUBB3-214ENST00000557490 NEO1Q92859 1461 aa25.28■■□□□ 1.64
TUBB3-214ENST00000557490 ARHGEF40Q8TER5 1519 aa25.27■■□□□ 1.64
TUBB3-214ENST00000557490 TTC37Q6PGP7 1564 aa25.27■■□□□ 1.64
TUBB3-214ENST00000557490 SPATA31D1Q6ZQQ2 1576 aa25.27■■□□□ 1.64
TUBB3-214ENST00000557490 KIF14Q15058 1648 aa25.25■■□□□ 1.63
TUBB3-214ENST00000557490 PLCH2O75038 1416 aa25.21■■□□□ 1.63
TUBB3-214ENST00000557490 PLPPR3Q6T4P5 718 aa25.21■■□□□ 1.63
TUBB3-214ENST00000557490 FANCAO15360 1455 aa25.21■■□□□ 1.63
TUBB3-214ENST00000557490 AKNAQ7Z591 1439 aa25.19■■□□□ 1.62
TUBB3-214ENST00000557490 VPS8Q8N3P4 1428 aa25.18■■□□□ 1.62
TUBB3-214ENST00000557490 CFAP74Q9C0B2 1584 aa25.18■■□□□ 1.62
TUBB3-214ENST00000557490 EFCAB2Q5VUJ9 269 aa25.17■■□□□ 1.62
TUBB3-214ENST00000557490 RICTORQ6R327 1708 aa25.15■■□□□ 1.62
TUBB3-214ENST00000557490 MTUS2Q5JR59 1369 aa25.15■■□□□ 1.62
TUBB3-214ENST00000557490 SIGLEC1Q9BZZ2 1709 aa25.15■■□□□ 1.62
TUBB3-214ENST00000557490 MYO5CQ9NQX4 1742 aa25.12■■□□□ 1.61
TUBB3-214ENST00000557490 DENND4BO75064 1496 aaPredicted RBP25.12■■□□□ 1.61
TUBB3-214ENST00000557490 POGZQ7Z3K3 1410 aa25.12■■□□□ 1.61
TUBB3-214ENST00000557490 ARHGAP5Q13017 1502 aa25.1■■□□□ 1.61
TUBB3-214ENST00000557490 FER1L4A9Z1Z3 1794 aa25.1■■□□□ 1.61
TUBB3-214ENST00000557490 SCAPERQ9BY12 1400 aa25.06■■□□□ 1.6
TUBB3-214ENST00000557490 PREX1Q8TCU6 1659 aa25.06■■□□□ 1.6
TUBB3-214ENST00000557490 EHBP1L1Q8N3D4 1523 aa25.05■■□□□ 1.6
TUBB3-214ENST00000557490 STRCQ7RTU9 1775 aa25.05■■□□□ 1.6
TUBB3-214ENST00000557490 ZMYM4Q5VZL5 1548 aa25.04■■□□□ 1.6
TUBB3-214ENST00000557490 YEATS2Q9ULM3 1422 aa25.03■■□□□ 1.6
TUBB3-214ENST00000557490 ZFYVE16Q7Z3T8 1539 aa25.02■■□□□ 1.6
TUBB3-214ENST00000557490 CCNB3Q8WWL7 1395 aa25.02■■□□□ 1.6
TUBB3-214ENST00000557490 PREX2Q70Z35 1606 aa25.01■■□□□ 1.59
TUBB3-214ENST00000557490 TIAM1Q13009 1591 aa25.01■■□□□ 1.59
TUBB3-214ENST00000557490 MLECQ14165 292 aa25■■□□□ 1.59
TUBB3-214ENST00000557490 GPATCH8Q9UKJ3 1502 aaKnown RBP24.99■■□□□ 1.59
TUBB3-214ENST00000557490 APLP2Q06481 763 aa24.98■■□□□ 1.59
TUBB3-214ENST00000557490 CDC42BPBQ9Y5S2 1711 aa24.98■■□□□ 1.59
TUBB3-214ENST00000557490 CFDP1Q9UEE9 299 aaPredicted RBP24.97■■□□□ 1.59
TUBB3-214ENST00000557490 DMRT2Q9Y5R5 561 aa24.97■■□□□ 1.59
TUBB3-214ENST00000557490 CDC42BPAQ5VT25 1732 aa24.96■■□□□ 1.59
TUBB3-214ENST00000557490 ZNF777Q9ULD5 760 aaPredicted RBP24.96■■□□□ 1.59
TUBB3-214ENST00000557490 MAP3K1Q13233 1512 aa24.96■■□□□ 1.59
TUBB3-214ENST00000557490 ARHGEF12Q9NZN5 1544 aa24.94■■□□□ 1.58
TUBB3-214ENST00000557490 LRRC9Q6ZRR7 1453 aa24.93■■□□□ 1.58
TUBB3-214ENST00000557490 MAGI2Q86UL8 1455 aa24.93■■□□□ 1.58
TUBB3-214ENST00000557490 ZNF518AQ6AHZ1 1483 aa24.92■■□□□ 1.58
TUBB3-214ENST00000557490 AFAP1Q8N556 730 aa24.91■■□□□ 1.58
TUBB3-214ENST00000557490 NCOA2Q15596 1464 aa24.9■■□□□ 1.58
TUBB3-214ENST00000557490 ABCC1P33527 1531 aa24.9■■□□□ 1.58
TUBB3-214ENST00000557490 SUPT6HQ7KZ85 1726 aaKnown RBP24.89■■□□□ 1.58
TUBB3-214ENST00000557490 KANK4Q5T7N3 995 aaPredicted RBP24.88■■□□□ 1.57
TUBB3-214ENST00000557490 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
TUBB3-214ENST00000557490 CEBPAP49715 358 aaPredicted RBP24.87■■□□□ 1.57
TUBB3-214ENST00000557490 LTBP4Q8N2S1 1624 aa24.86■■□□□ 1.57
TUBB3-214ENST00000557490 PLEKHH2Q8IVE3 1493 aa24.86■■□□□ 1.57
TUBB3-214ENST00000557490 PTPRTO14522 1441 aa24.86■■□□□ 1.57
TUBB3-214ENST00000557490 UHRF1BP1Q6BDS2 1440 aa24.86■■□□□ 1.57
TUBB3-214ENST00000557490 TRAPPC8Q9Y2L5 1435 aa24.86■■□□□ 1.57
TUBB3-214ENST00000557490 SAMD9LQ8IVG5 1584 aa24.85■■□□□ 1.57
TUBB3-214ENST00000557490 SETD1BQ9UPS6 1966 aaKnown RBP24.84■■□□□ 1.57
TUBB3-214ENST00000557490 KIAA1107Q9UPP5 1409 aa24.84■■□□□ 1.57
TUBB3-214ENST00000557490 ITSN2Q9NZM3 1697 aa24.84■■□□□ 1.57
TUBB3-214ENST00000557490 IQSEC2Q5JU85 1478 aa24.83■■□□□ 1.57
TUBB3-214ENST00000557490 HNRNPMP52272 730 aaKnown RBP eCLIP24.83■■□□□ 1.57
TUBB3-214ENST00000557490 KDM5CP41229 1560 aa24.83■■□□□ 1.57
TUBB3-214ENST00000557490 SYCP2Q9BX26 1530 aa24.81■■□□□ 1.56
TUBB3-214ENST00000557490 ATP10AO60312 1499 aa24.8■■□□□ 1.56
TUBB3-214ENST00000557490 C9orf84Q5VXU9 1444 aa24.79■■□□□ 1.56
TUBB3-214ENST00000557490 ZNF644Q9H582 1327 aaPredicted RBP24.79■■□□□ 1.56
TUBB3-214ENST00000557490 MLH3Q9UHC1 1453 aa24.78■■□□□ 1.56
TUBB3-214ENST00000557490 SPAG9O60271 1321 aaKnown RBP24.76■■□□□ 1.55
TUBB3-214ENST00000557490 CAMSAP2Q08AD1 1489 aa24.7■■□□□ 1.55
TUBB3-214ENST00000557490 MYOM3Q5VTT5 1437 aa24.7■■□□□ 1.55
TUBB3-214ENST00000557490 MBD5Q9P267 1494 aa24.7■■□□□ 1.54
TUBB3-214ENST00000557490 C3P01024 1663 aa24.69■■□□□ 1.54
TUBB3-214ENST00000557490 DIP2CQ9Y2E4 1556 aa24.69■■□□□ 1.54
TUBB3-214ENST00000557490 RSPH4AQ5TD94 716 aa24.69■■□□□ 1.54
TUBB3-214ENST00000557490 MIA2Q96PC5 1412 aa24.68■■□□□ 1.54
TUBB3-214ENST00000557490 ABCA6Q8N139 1617 aa24.66■■□□□ 1.54
TUBB3-214ENST00000557490 NCOA1Q15788 1441 aa24.66■■□□□ 1.54
TUBB3-214ENST00000557490 KIDINS220Q9ULH0 1771 aa24.65■■□□□ 1.54
TUBB3-214ENST00000557490 ATP7AQ04656 1500 aa24.64■■□□□ 1.53
TUBB3-214ENST00000557490 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.53
TUBB3-214ENST00000557490 REREQ9P2R6 1566 aa24.63■■□□□ 1.53
TUBB3-214ENST00000557490 INO80Q9ULG1 1556 aaPredicted RBP24.6■■□□□ 1.53
TUBB3-214ENST00000557490 UBAP1LF5GYI3 381 aa24.6■■□□□ 1.53
TUBB3-214ENST00000557490 TSPY4P0CV99 314 aa24.6■■□□□ 1.53
TUBB3-214ENST00000557490 TSPY10P0CW01 314 aa24.6■■□□□ 1.53
TUBB3-214ENST00000557490 RTEL1-TNFRSF6BF6WH68 1400 aa24.6■■□□□ 1.53
TUBB3-214ENST00000557490 ARHGEF5Q12774 1597 aa24.58■■□□□ 1.52
TUBB3-214ENST00000557490 AGLP35573 1532 aa24.57■■□□□ 1.52
TUBB3-214ENST00000557490 MED1Q15648 1581 aaPredicted RBP24.56■■□□□ 1.52
TUBB3-214ENST00000557490 FGD6Q6ZV73 1430 aa24.55■■□□□ 1.52
TUBB3-214ENST00000557490 A2MP01023 1474 aa24.55■■□□□ 1.52
TUBB3-214ENST00000557490 CAMSAP1Q5T5Y3 1602 aa24.54■■□□□ 1.52
TUBB3-214ENST00000557490 ZNF335Q9H4Z2 1342 aaPredicted RBP24.54■■□□□ 1.52
TUBB3-214ENST00000557490 PTPN23Q9H3S7 1636 aa24.52■■□□□ 1.52
TUBB3-214ENST00000557490 ESF1Q9H501 851 aaKnown RBP24.5■■□□□ 1.51
TUBB3-214ENST00000557490 TCOF1Q13428 1488 aaKnown RBP24.48■■□□□ 1.51
TUBB3-214ENST00000557490 DHX29Q7Z478 1369 aaKnown RBP24.48■■□□□ 1.51
TUBB3-214ENST00000557490 ADGBQ8N7X0 1667 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms