RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 IL27Q8NEV9 243 aa14.3□□□□□ -0.12
SUPT16H-207ENST00000557394 WASHC2AQ641Q2 1341 aa14.3□□□□□ -0.12
SUPT16H-207ENST00000557394 RTL5Q5HYW3 569 aaPredicted RBP14.29□□□□□ -0.12
SUPT16H-207ENST00000557394 PLCB2Q00722 1185 aa14.29□□□□□ -0.12
SUPT16H-207ENST00000557394 IPO9Q96P70 1041 aaKnown RBP14.29□□□□□ -0.12
SUPT16H-207ENST00000557394 MAP3K1Q13233 1512 aa14.28□□□□□ -0.12
SUPT16H-207ENST00000557394 CDK11BP21127 795 aaKnown RBP14.28□□□□□ -0.12
SUPT16H-207ENST00000557394 HIRIP3Q9BW71 556 aaPredicted RBP14.28□□□□□ -0.12
SUPT16H-207ENST00000557394 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
SUPT16H-207ENST00000557394 MAGI1Q96QZ7 1491 aaPredicted RBP14.27□□□□□ -0.12
SUPT16H-207ENST00000557394 B4GALNT3Q6L9W6 998 aa14.27□□□□□ -0.13
SUPT16H-207ENST00000557394 SNAPC4Q5SXM2 1469 aa14.26□□□□□ -0.13
SUPT16H-207ENST00000557394 C11orf95C9JLR9 678 aaPredicted RBP14.25□□□□□ -0.13
SUPT16H-207ENST00000557394 ARHGAP35Q9NRY4 1499 aa14.23□□□□□ -0.13
SUPT16H-207ENST00000557394 ANP32AP39687 249 aaKnown RBP14.23□□□□□ -0.13
SUPT16H-207ENST00000557394 AAMPQ13685 434 aa14.23□□□□□ -0.13
SUPT16H-207ENST00000557394 ZBTB47Q9UFB7 747 aaPredicted RBP14.21□□□□□ -0.13
SUPT16H-207ENST00000557394 TIAM1Q13009 1591 aa14.21□□□□□ -0.13
SUPT16H-207ENST00000557394 SYNJ2O15056 1496 aa14.21□□□□□ -0.14
SUPT16H-207ENST00000557394 WASHC2CQ9Y4E1 1318 aa14.21□□□□□ -0.14
SUPT16H-207ENST00000557394 PAXIP1Q6ZW49 1069 aaPredicted RBP14.2□□□□□ -0.14
SUPT16H-207ENST00000557394 CTTNBP2Q8WZ74 1663 aa14.2□□□□□ -0.14
SUPT16H-207ENST00000557394 USP35Q9P2H5 1018 aa14.19□□□□□ -0.14
SUPT16H-207ENST00000557394 ZBED9Q6R2W3 1325 aa14.18□□□□□ -0.14
SUPT16H-207ENST00000557394 GRIN2AQ12879 1464 aa14.17□□□□□ -0.14
SUPT16H-207ENST00000557394 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.16□□□□□ -0.14
SUPT16H-207ENST00000557394 NCOA2Q15596 1464 aa14.15□□□□□ -0.14
SUPT16H-207ENST00000557394 PHLDB1Q86UU1 1377 aa14.15□□□□□ -0.14
SUPT16H-207ENST00000557394 LRRC9Q6ZRR7 1453 aa14.15□□□□□ -0.14
SUPT16H-207ENST00000557394 TONSLQ96HA7 1378 aa14.15□□□□□ -0.14
SUPT16H-207ENST00000557394 CHD1O14646 1710 aa14.14□□□□□ -0.15
SUPT16H-207ENST00000557394 KDM5BQ9UGL1 1544 aa14.14□□□□□ -0.15
SUPT16H-207ENST00000557394 RNF123Q5XPI4 1314 aa14.14□□□□□ -0.15
SUPT16H-207ENST00000557394 RSPH4AQ5TD94 716 aa14.13□□□□□ -0.15
SUPT16H-207ENST00000557394 CHMP7Q8WUX9 453 aaPredicted RBP14.13□□□□□ -0.15
SUPT16H-207ENST00000557394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.12□□□□□ -0.15
SUPT16H-207ENST00000557394 CNTLNQ9NXG0 1405 aa14.11□□□□□ -0.15
SUPT16H-207ENST00000557394 CCDC184Q52MB2 194 aa14.1□□□□□ -0.15
SUPT16H-207ENST00000557394 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
SUPT16H-207ENST00000557394 RSPH6AQ9H0K4 717 aa14.1□□□□□ -0.15
SUPT16H-207ENST00000557394 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
SUPT16H-207ENST00000557394 CEP170Q5SW79 1584 aa14.09□□□□□ -0.15
SUPT16H-207ENST00000557394 NUP160Q12769 1436 aa14.09□□□□□ -0.15
SUPT16H-207ENST00000557394 HSP90B1P14625 803 aaKnown RBP14.08□□□□□ -0.16
SUPT16H-207ENST00000557394 IQGAP2Q13576 1575 aa14.08□□□□□ -0.16
SUPT16H-207ENST00000557394 FBLN2P98095 1184 aa14.08□□□□□ -0.16
SUPT16H-207ENST00000557394 RBM10P98175 930 aaKnown RBP14.08□□□□□ -0.16
SUPT16H-207ENST00000557394 KIAA0586Q9BVV6 1533 aa14.08□□□□□ -0.16
SUPT16H-207ENST00000557394 IGSF3O75054 1194 aa14.07□□□□□ -0.16
SUPT16H-207ENST00000557394 CFAP43Q8NDM7 1665 aa14.07□□□□□ -0.16
SUPT16H-207ENST00000557394 NEFMP07197 916 aa14.06□□□□□ -0.16
SUPT16H-207ENST00000557394 PRKRIP1Q9H875 184 aaPredicted RBP14.06□□□□□ -0.16
SUPT16H-207ENST00000557394 FAM50AQ14320 339 aaKnown RBP14.05□□□□□ -0.16
SUPT16H-207ENST00000557394 EFCAB5A4FU69 1503 aa14.05□□□□□ -0.16
SUPT16H-207ENST00000557394 UACAQ9BZF9 1416 aa14.05□□□□□ -0.16
SUPT16H-207ENST00000557394 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
SUPT16H-207ENST00000557394 AKNAQ7Z591 1439 aa14.03□□□□□ -0.16
SUPT16H-207ENST00000557394 HSPA5P11021 654 aaKnown RBP14.03□□□□□ -0.16
SUPT16H-207ENST00000557394 NAP1L5Q96NT1 182 aaPredicted RBP14.03□□□□□ -0.16
SUPT16H-207ENST00000557394 ZNF326Q5BKZ1 582 aaKnown RBP14.02□□□□□ -0.16
SUPT16H-207ENST00000557394 SAMD9Q5K651 1589 aa14.02□□□□□ -0.17
SUPT16H-207ENST00000557394 FAM9BQ8IZU0 186 aa14.02□□□□□ -0.17
SUPT16H-207ENST00000557394 UGGT2Q9NYU1 1516 aa14.02□□□□□ -0.17
SUPT16H-207ENST00000557394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.01□□□□□ -0.17
SUPT16H-207ENST00000557394 CCDC18Q5T9S5 1454 aa14.01□□□□□ -0.17
SUPT16H-207ENST00000557394 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
SUPT16H-207ENST00000557394 BRPF3Q9ULD4 1205 aa14□□□□□ -0.17
SUPT16H-207ENST00000557394 NUDCQ9Y266 331 aa14□□□□□ -0.17
SUPT16H-207ENST00000557394 NCOA1Q15788 1441 aa13.99□□□□□ -0.17
SUPT16H-207ENST00000557394 CFAP44Q96MT7 982 aa13.99□□□□□ -0.17
SUPT16H-207ENST00000557394 POLR3GLQ9BT43 218 aa13.99□□□□□ -0.17
SUPT16H-207ENST00000557394 HFM1A2PYH4 1435 aa13.99□□□□□ -0.17
SUPT16H-207ENST00000557394 LAS1LQ9Y4W2 734 aaKnown RBP13.98□□□□□ -0.17
SUPT16H-207ENST00000557394 CLASP1Q7Z460 1538 aa13.97□□□□□ -0.17
SUPT16H-207ENST00000557394 TCERG1O14776 1098 aaKnown RBP13.97□□□□□ -0.17
SUPT16H-207ENST00000557394 GSE1Q14687 1217 aa13.97□□□□□ -0.17
SUPT16H-207ENST00000557394 CCDC7Q96M83 1385 aa13.97□□□□□ -0.17
SUPT16H-207ENST00000557394 PTPN23Q9H3S7 1636 aa13.96□□□□□ -0.17
SUPT16H-207ENST00000557394 SHROOM2Q13796 1616 aa13.96□□□□□ -0.17
SUPT16H-207ENST00000557394 EIF4G2P78344 907 aaKnown RBP eCLIP13.96□□□□□ -0.18
SUPT16H-207ENST00000557394 BCCIPQ9P287 314 aaKnown RBP eCLIP13.95□□□□□ -0.18
SUPT16H-207ENST00000557394 KIAA0556O60303 1618 aa13.94□□□□□ -0.18
SUPT16H-207ENST00000557394 MS4A1P11836 297 aa13.94□□□□□ -0.18
SUPT16H-207ENST00000557394 BACH2Q9BYV9 841 aa13.93□□□□□ -0.18
SUPT16H-207ENST00000557394 DISP1Q96F81 1524 aa13.93□□□□□ -0.18
SUPT16H-207ENST00000557394 PCF11O94913 1555 aaKnown RBP13.93□□□□□ -0.18
SUPT16H-207ENST00000557394 PDE4AP27815 886 aa13.93□□□□□ -0.18
SUPT16H-207ENST00000557394 ZMYND15Q9H091 742 aa13.93□□□□□ -0.18
SUPT16H-207ENST00000557394 JPH4Q96JJ6 628 aa13.92□□□□□ -0.18
SUPT16H-207ENST00000557394 FHOD3Q2V2M9 1422 aa13.92□□□□□ -0.18
SUPT16H-207ENST00000557394 NAIPQ13075 1403 aa13.91□□□□□ -0.18
SUPT16H-207ENST00000557394 FGD6Q6ZV73 1430 aa13.91□□□□□ -0.18
SUPT16H-207ENST00000557394 GLIPR1L2Q4G1C9 344 aa13.9□□□□□ -0.18
SUPT16H-207ENST00000557394 FAM43AQ8N2R8 423 aa13.9□□□□□ -0.18
SUPT16H-207ENST00000557394 PTPRKQ15262 1439 aa13.9□□□□□ -0.18
SUPT16H-207ENST00000557394 CARMIL2Q6F5E8 1435 aa13.9□□□□□ -0.18
SUPT16H-207ENST00000557394 POLR1AO95602 1720 aaPredicted RBP13.9□□□□□ -0.18
SUPT16H-207ENST00000557394 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
SUPT16H-207ENST00000557394 DDRGK1Q96HY6 314 aa13.89□□□□□ -0.19
SUPT16H-207ENST00000557394 FMN1Q68DA7 1419 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms