RNA–Protein interactions for RNA: ENST00000557168.1

TRAV30-201, Transcript of T cell receptor alpha variable 30, humanhuman

APPRIS P1 BASIC

Gene TRAV30, Length 337 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30-201ENST00000557168 FHOD3Q2V2M9 1422 aa8.09□□□□□ -1.11
TRAV30-201ENST00000557168 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRAV30-201ENST00000557168 SCAPERQ9BY12 1400 aa8.08□□□□□ -1.12
TRAV30-201ENST00000557168 TTC37Q6PGP7 1564 aa8.08□□□□□ -1.12
TRAV30-201ENST00000557168 PREX1Q8TCU6 1659 aa8.08□□□□□ -1.12
TRAV30-201ENST00000557168 DMRT2Q9Y5R5 561 aa8.07□□□□□ -1.12
TRAV30-201ENST00000557168 SETD1BQ9UPS6 1966 aaKnown RBP8.06□□□□□ -1.12
TRAV30-201ENST00000557168 AFAP1Q8N556 730 aa8.06□□□□□ -1.12
TRAV30-201ENST00000557168 SAMD9Q5K651 1589 aa8.05□□□□□ -1.12
TRAV30-201ENST00000557168 EFCAB5A4FU69 1503 aa8.05□□□□□ -1.12
TRAV30-201ENST00000557168 UBAP1LF5GYI3 381 aa8.05□□□□□ -1.12
TRAV30-201ENST00000557168 ATP10AO60312 1499 aa8.05□□□□□ -1.12
TRAV30-201ENST00000557168 NCKAP5LQ9HCH0 1330 aa8.04□□□□□ -1.12
TRAV30-201ENST00000557168 UHRF1BP1Q6BDS2 1440 aa8.04□□□□□ -1.12
TRAV30-201ENST00000557168 CDK13Q14004 1512 aaKnown RBP8.04□□□□□ -1.12
TRAV30-201ENST00000557168 ZMYM4Q5VZL5 1548 aa8.04□□□□□ -1.12
TRAV30-201ENST00000557168 ARHGEF12Q9NZN5 1544 aa8.04□□□□□ -1.12
TRAV30-201ENST00000557168 CSRNP3Q8WYN3 585 aa8.04□□□□□ -1.12
TRAV30-201ENST00000557168 ZNF335Q9H4Z2 1342 aaPredicted RBP8.03□□□□□ -1.12
TRAV30-201ENST00000557168 LTBP4Q8N2S1 1624 aa8.03□□□□□ -1.12
TRAV30-201ENST00000557168 SENP3Q9H4L4 574 aaPredicted RBP8.03□□□□□ -1.12
TRAV30-201ENST00000557168 SCAF1Q9H7N4 1312 aaKnown RBP8.03□□□□□ -1.12
TRAV30-201ENST00000557168 CFAP74Q9C0B2 1584 aa8.02□□□□□ -1.13
TRAV30-201ENST00000557168 C9orf84Q5VXU9 1444 aa8.02□□□□□ -1.13
TRAV30-201ENST00000557168 C3P01024 1663 aa8.02□□□□□ -1.13
TRAV30-201ENST00000557168 MAGI2Q86UL8 1455 aa8.01□□□□□ -1.13
TRAV30-201ENST00000557168 EFCAB2Q5VUJ9 269 aa8.01□□□□□ -1.13
TRAV30-201ENST00000557168 ESF1Q9H501 851 aaKnown RBP8.01□□□□□ -1.13
TRAV30-201ENST00000557168 PTPRTO14522 1441 aa8.01□□□□□ -1.13
TRAV30-201ENST00000557168 PLCH2O75038 1416 aa8.01□□□□□ -1.13
TRAV30-201ENST00000557168 PIP4K2BP78356 416 aa8□□□□□ -1.13
TRAV30-201ENST00000557168 HSPA1LP34931 641 aa7.99□□□□□ -1.13
TRAV30-201ENST00000557168 MYO5CQ9NQX4 1742 aa7.98□□□□□ -1.13
TRAV30-201ENST00000557168 NCOA1Q15788 1441 aa7.97□□□□□ -1.13
TRAV30-201ENST00000557168 KIF14Q15058 1648 aa7.97□□□□□ -1.13
TRAV30-201ENST00000557168 CAMSAP1Q5T5Y3 1602 aa7.97□□□□□ -1.13
TRAV30-201ENST00000557168 DIP2CQ9Y2E4 1556 aa7.97□□□□□ -1.13
TRAV30-201ENST00000557168 TRAPPC8Q9Y2L5 1435 aa7.96□□□□□ -1.13
TRAV30-201ENST00000557168 ARHGAP5Q13017 1502 aa7.96□□□□□ -1.14
TRAV30-201ENST00000557168 ABCA6Q8N139 1617 aa7.96□□□□□ -1.14
TRAV30-201ENST00000557168 HRCP23327 699 aa7.95□□□□□ -1.14
TRAV30-201ENST00000557168 ZNF777Q9ULD5 760 aaPredicted RBP7.94□□□□□ -1.14
TRAV30-201ENST00000557168 ZNF518AQ6AHZ1 1483 aa7.94□□□□□ -1.14
TRAV30-201ENST00000557168 MED1Q15648 1581 aaPredicted RBP7.93□□□□□ -1.14
TRAV30-201ENST00000557168 CDC42BPBQ9Y5S2 1711 aa7.93□□□□□ -1.14
TRAV30-201ENST00000557168 PHF23Q9BUL5 403 aaPredicted RBP7.93□□□□□ -1.14
TRAV30-201ENST00000557168 ZMYM3Q14202 1370 aa7.93□□□□□ -1.14
TRAV30-201ENST00000557168 SUPT6HQ7KZ85 1726 aaKnown RBP7.92□□□□□ -1.14
TRAV30-201ENST00000557168 UBTFP17480 764 aaKnown RBP7.92□□□□□ -1.14
TRAV30-201ENST00000557168 GGT6Q6P531 493 aa7.92□□□□□ -1.14
TRAV30-201ENST00000557168 IQSEC2Q5JU85 1478 aa7.92□□□□□ -1.14
TRAV30-201ENST00000557168 KDM5CP41229 1560 aa7.92□□□□□ -1.14
TRAV30-201ENST00000557168 LRRIQ1Q96JM4 1722 aa7.92□□□□□ -1.14
TRAV30-201ENST00000557168 HNRNPMP52272 730 aaKnown RBP eCLIP7.91□□□□□ -1.14
TRAV30-201ENST00000557168 PPP6R1Q9UPN7 881 aa7.91□□□□□ -1.14
TRAV30-201ENST00000557168 CDK11AQ9UQ88 783 aaPredicted RBP7.91□□□□□ -1.14
TRAV30-201ENST00000557168 KIDINS220Q9ULH0 1771 aa7.91□□□□□ -1.14
TRAV30-201ENST00000557168 CLTCQ00610 1675 aaKnown RBP7.9□□□□□ -1.14
TRAV30-201ENST00000557168 MLH3Q9UHC1 1453 aa7.89□□□□□ -1.15
TRAV30-201ENST00000557168 TROQ12816 1431 aaPredicted RBP7.89□□□□□ -1.15
TRAV30-201ENST00000557168 LOC105371045A0A1W2PR82 267 aa7.89□□□□□ -1.15
TRAV30-201ENST00000557168 TOM1O60784 492 aa7.89□□□□□ -1.15
TRAV30-201ENST00000557168 PKD2Q13563 968 aa7.89□□□□□ -1.15
TRAV30-201ENST00000557168 FBXO31Q5XUX0 539 aaPredicted RBP7.88□□□□□ -1.15
TRAV30-201ENST00000557168 ITSN2Q9NZM3 1697 aa7.88□□□□□ -1.15
TRAV30-201ENST00000557168 AGLP35573 1532 aa7.88□□□□□ -1.15
TRAV30-201ENST00000557168 REREQ9P2R6 1566 aa7.87□□□□□ -1.15
TRAV30-201ENST00000557168 ARHGAP35Q9NRY4 1499 aa7.87□□□□□ -1.15
TRAV30-201ENST00000557168 CNTLNQ9NXG0 1405 aa7.86□□□□□ -1.15
TRAV30-201ENST00000557168 MYO3AQ8NEV4 1616 aa7.86□□□□□ -1.15
TRAV30-201ENST00000557168 SPAG9O60271 1321 aaKnown RBP7.86□□□□□ -1.15
TRAV30-201ENST00000557168 RGS17Q9UGC6 210 aaPredicted RBP7.86□□□□□ -1.15
TRAV30-201ENST00000557168 ABCC1P33527 1531 aa7.86□□□□□ -1.15
TRAV30-201ENST00000557168 CLIP1P30622 1438 aa7.86□□□□□ -1.15
TRAV30-201ENST00000557168 PTPRKQ15262 1439 aa7.86□□□□□ -1.15
TRAV30-201ENST00000557168 CEP170BQ9Y4F5 1589 aaPredicted RBP7.85□□□□□ -1.15
TRAV30-201ENST00000557168 TCOF1Q13428 1488 aaKnown RBP7.85□□□□□ -1.15
TRAV30-201ENST00000557168 MROH2AA6NES4 1674 aa7.85□□□□□ -1.15
TRAV30-201ENST00000557168 NPATQ14207 1427 aa7.85□□□□□ -1.15
TRAV30-201ENST00000557168 PREX2Q70Z35 1606 aa7.85□□□□□ -1.15
TRAV30-201ENST00000557168 SAMD9LQ8IVG5 1584 aa7.84□□□□□ -1.15
TRAV30-201ENST00000557168 CDC42BPAQ5VT25 1732 aa7.84□□□□□ -1.15
TRAV30-201ENST00000557168 PCGF6Q9BYE7 350 aa7.84□□□□□ -1.15
TRAV30-201ENST00000557168 FMN1Q68DA7 1419 aa7.84□□□□□ -1.15
TRAV30-201ENST00000557168 SHANK2Q9UPX8 1470 aa7.83□□□□□ -1.16
TRAV30-201ENST00000557168 DNMT1P26358 1616 aaKnown RBP7.83□□□□□ -1.16
TRAV30-201ENST00000557168 ALKQ9UM73 1620 aa7.83□□□□□ -1.16
TRAV30-201ENST00000557168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRAV30-201ENST00000557168 SYCP2Q9BX26 1530 aa7.83□□□□□ -1.16
TRAV30-201ENST00000557168 ZNF142P52746 1687 aaPredicted RBP7.83□□□□□ -1.16
TRAV30-201ENST00000557168 ZNF644Q9H582 1327 aaPredicted RBP7.82□□□□□ -1.16
TRAV30-201ENST00000557168 PLA2R1Q13018 1463 aa7.82□□□□□ -1.16
TRAV30-201ENST00000557168 TRIM26Q12899 539 aaPredicted RBP7.82□□□□□ -1.16
TRAV30-201ENST00000557168 CFAP65Q6ZU64 1925 aaKnown RBP7.82□□□□□ -1.16
TRAV30-201ENST00000557168 A2MP01023 1474 aa7.81□□□□□ -1.16
TRAV30-201ENST00000557168 NEURL4Q96JN8 1562 aa7.81□□□□□ -1.16
TRAV30-201ENST00000557168 EEA1Q15075 1411 aa7.81□□□□□ -1.16
TRAV30-201ENST00000557168 POTEAQ6S8J7 498 aa7.81□□□□□ -1.16
TRAV30-201ENST00000557168 ANKLE2Q86XL3 938 aa7.81□□□□□ -1.16
TRAV30-201ENST00000557168 STRCP1A6NGW2 1772 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms