RNA–Protein interactions for RNA: ENST00000557065.1

COCH-211, Transcript of cochlin, humanhuman

TSL 5

Gene COCH, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-211ENST00000557065 MYT1LQ9UL68 1186 aa13.27□□□□□ -0.29
COCH-211ENST00000557065 CLIP1P30622 1438 aa13.27□□□□□ -0.29
COCH-211ENST00000557065 TROQ12816 1431 aaPredicted RBP13.26□□□□□ -0.29
COCH-211ENST00000557065 HECW1Q76N89 1606 aa13.26□□□□□ -0.29
COCH-211ENST00000557065 AFAP1Q8N556 730 aa13.26□□□□□ -0.29
COCH-211ENST00000557065 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
COCH-211ENST00000557065 ZFYVE16Q7Z3T8 1539 aa13.24□□□□□ -0.29
COCH-211ENST00000557065 BCORL1Q5H9F3 1711 aa13.24□□□□□ -0.29
COCH-211ENST00000557065 ZMYM4Q5VZL5 1548 aa13.23□□□□□ -0.29
COCH-211ENST00000557065 ARHGEF40Q8TER5 1519 aa13.23□□□□□ -0.29
COCH-211ENST00000557065 ATP10AO60312 1499 aa13.23□□□□□ -0.29
COCH-211ENST00000557065 RICTORQ6R327 1708 aa13.23□□□□□ -0.29
COCH-211ENST00000557065 CASKIN1Q8WXD9 1431 aa13.22□□□□□ -0.29
COCH-211ENST00000557065 MADDQ8WXG6 1647 aa13.21□□□□□ -0.29
COCH-211ENST00000557065 ARHGAP5Q13017 1502 aa13.2□□□□□ -0.3
COCH-211ENST00000557065 HSPA2P54652 639 aa13.2□□□□□ -0.3
COCH-211ENST00000557065 FBXO41Q8TF61 875 aa13.2□□□□□ -0.3
COCH-211ENST00000557065 ZNF518AQ6AHZ1 1483 aa13.19□□□□□ -0.3
COCH-211ENST00000557065 C9orf84Q5VXU9 1444 aa13.19□□□□□ -0.3
COCH-211ENST00000557065 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
COCH-211ENST00000557065 KIF14Q15058 1648 aa13.18□□□□□ -0.3
COCH-211ENST00000557065 PIAS4Q8N2W9 510 aaPredicted RBP13.18□□□□□ -0.3
COCH-211ENST00000557065 PCF11O94913 1555 aaKnown RBP13.17□□□□□ -0.3
COCH-211ENST00000557065 CEBPAP49715 358 aaPredicted RBP13.17□□□□□ -0.3
COCH-211ENST00000557065 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
COCH-211ENST00000557065 ZNF777Q9ULD5 760 aaPredicted RBP13.17□□□□□ -0.3
COCH-211ENST00000557065 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
COCH-211ENST00000557065 MYO5CQ9NQX4 1742 aa13.16□□□□□ -0.3
COCH-211ENST00000557065 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.3
COCH-211ENST00000557065 FYCO1Q9BQS8 1478 aa13.12□□□□□ -0.31
COCH-211ENST00000557065 MLH3Q9UHC1 1453 aa13.12□□□□□ -0.31
COCH-211ENST00000557065 CFDP1Q9UEE9 299 aaPredicted RBP13.12□□□□□ -0.31
COCH-211ENST00000557065 TRAPPC8Q9Y2L5 1435 aa13.12□□□□□ -0.31
COCH-211ENST00000557065 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
COCH-211ENST00000557065 ARHGEF12Q9NZN5 1544 aa13.1□□□□□ -0.31
COCH-211ENST00000557065 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
COCH-211ENST00000557065 KDM5CP41229 1560 aa13.1□□□□□ -0.31
COCH-211ENST00000557065 SIGLEC1Q9BZZ2 1709 aa13.1□□□□□ -0.31
COCH-211ENST00000557065 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
COCH-211ENST00000557065 CCNB3Q8WWL7 1395 aa13.08□□□□□ -0.31
COCH-211ENST00000557065 LRRIQ1Q96JM4 1722 aa13.08□□□□□ -0.32
COCH-211ENST00000557065 MTUS2Q5JR59 1369 aa13.07□□□□□ -0.32
COCH-211ENST00000557065 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
COCH-211ENST00000557065 GPATCH8Q9UKJ3 1502 aaKnown RBP13.07□□□□□ -0.32
COCH-211ENST00000557065 CDC42BPBQ9Y5S2 1711 aa13.06□□□□□ -0.32
COCH-211ENST00000557065 ABCC1P33527 1531 aa13.06□□□□□ -0.32
COCH-211ENST00000557065 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
COCH-211ENST00000557065 FER1L4A9Z1Z3 1794 aa13.05□□□□□ -0.32
COCH-211ENST00000557065 DIP2CQ9Y2E4 1556 aa13.05□□□□□ -0.32
COCH-211ENST00000557065 UHRF1BP1Q6BDS2 1440 aa13.05□□□□□ -0.32
COCH-211ENST00000557065 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
COCH-211ENST00000557065 AGLP35573 1532 aa13.04□□□□□ -0.32
COCH-211ENST00000557065 REREQ9P2R6 1566 aa13.04□□□□□ -0.32
COCH-211ENST00000557065 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
COCH-211ENST00000557065 CNTLNQ9NXG0 1405 aa13.02□□□□□ -0.33
COCH-211ENST00000557065 GGT6Q6P531 493 aa13.01□□□□□ -0.33
COCH-211ENST00000557065 PPP6R1Q9UPN7 881 aa13.01□□□□□ -0.33
COCH-211ENST00000557065 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
COCH-211ENST00000557065 ABCA6Q8N139 1617 aa13.01□□□□□ -0.33
COCH-211ENST00000557065 SAMD9LQ8IVG5 1584 aa13□□□□□ -0.33
COCH-211ENST00000557065 ZMYM3Q14202 1370 aa13□□□□□ -0.33
COCH-211ENST00000557065 CDC42BPAQ5VT25 1732 aa12.99□□□□□ -0.33
COCH-211ENST00000557065 SYCP2Q9BX26 1530 aa12.99□□□□□ -0.33
COCH-211ENST00000557065 SETD1BQ9UPS6 1966 aaKnown RBP12.99□□□□□ -0.33
COCH-211ENST00000557065 ITSN2Q9NZM3 1697 aa12.99□□□□□ -0.33
COCH-211ENST00000557065 CEP162Q5TB80 1403 aa12.98□□□□□ -0.33
COCH-211ENST00000557065 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
COCH-211ENST00000557065 KIDINS220Q9ULH0 1771 aa12.98□□□□□ -0.33
COCH-211ENST00000557065 PREX1Q8TCU6 1659 aa12.97□□□□□ -0.33
COCH-211ENST00000557065 A2MP01023 1474 aa12.97□□□□□ -0.33
COCH-211ENST00000557065 LOC105371045A0A1W2PR82 267 aa12.96□□□□□ -0.33
COCH-211ENST00000557065 PTPRTO14522 1441 aa12.95□□□□□ -0.34
COCH-211ENST00000557065 NPATQ14207 1427 aa12.95□□□□□ -0.34
COCH-211ENST00000557065 ATP7AQ04656 1500 aa12.94□□□□□ -0.34
COCH-211ENST00000557065 TSPY4P0CV99 314 aa12.94□□□□□ -0.34
COCH-211ENST00000557065 TSPY10P0CW01 314 aa12.94□□□□□ -0.34
COCH-211ENST00000557065 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
COCH-211ENST00000557065 MBD5Q9P267 1494 aa12.93□□□□□ -0.34
COCH-211ENST00000557065 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
COCH-211ENST00000557065 KIF3BO15066 747 aa12.92□□□□□ -0.34
COCH-211ENST00000557065 C3P01024 1663 aa12.92□□□□□ -0.34
COCH-211ENST00000557065 EHBP1L1Q8N3D4 1523 aa12.92□□□□□ -0.34
COCH-211ENST00000557065 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
COCH-211ENST00000557065 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
COCH-211ENST00000557065 PKD2Q13563 968 aa12.9□□□□□ -0.34
COCH-211ENST00000557065 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
COCH-211ENST00000557065 SUPT6HQ7KZ85 1726 aaKnown RBP12.89□□□□□ -0.35
COCH-211ENST00000557065 NCOA2Q15596 1464 aa12.89□□□□□ -0.35
COCH-211ENST00000557065 TIAM1Q13009 1591 aa12.89□□□□□ -0.35
COCH-211ENST00000557065 STRCQ7RTU9 1775 aa12.89□□□□□ -0.35
COCH-211ENST00000557065 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
COCH-211ENST00000557065 INO80Q9ULG1 1556 aaPredicted RBP12.88□□□□□ -0.35
COCH-211ENST00000557065 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
COCH-211ENST00000557065 PLXNC1O60486 1568 aa12.86□□□□□ -0.35
COCH-211ENST00000557065 FBXO31Q5XUX0 539 aaPredicted RBP12.86□□□□□ -0.35
COCH-211ENST00000557065 CCDC141Q6ZP82 1450 aa12.85□□□□□ -0.35
COCH-211ENST00000557065 CAMSAP1Q5T5Y3 1602 aa12.85□□□□□ -0.35
COCH-211ENST00000557065 APLP2Q06481 763 aa12.85□□□□□ -0.35
COCH-211ENST00000557065 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
COCH-211ENST00000557065 MROH2AA6NES4 1674 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms