RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 MYO5CQ9NQX4 1742 aa17.24■□□□□ 0.35
XRCC3-216ENST00000556682 POGZQ7Z3K3 1410 aa17.23■□□□□ 0.35
XRCC3-216ENST00000556682 LRRIQ1Q96JM4 1722 aa17.22■□□□□ 0.35
XRCC3-216ENST00000556682 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
XRCC3-216ENST00000556682 ZMYM4Q5VZL5 1548 aa17.21■□□□□ 0.35
XRCC3-216ENST00000556682 RICTORQ6R327 1708 aa17.21■□□□□ 0.35
XRCC3-216ENST00000556682 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
XRCC3-216ENST00000556682 MYT1LQ9UL68 1186 aa17.21■□□□□ 0.35
XRCC3-216ENST00000556682 ZFYVE16Q7Z3T8 1539 aa17.2■□□□□ 0.34
XRCC3-216ENST00000556682 ARHGEF40Q8TER5 1519 aa17.2■□□□□ 0.34
XRCC3-216ENST00000556682 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
XRCC3-216ENST00000556682 AFAP1Q8N556 730 aa17.19■□□□□ 0.34
XRCC3-216ENST00000556682 YEATS2Q9ULM3 1422 aa17.18■□□□□ 0.34
XRCC3-216ENST00000556682 ZNF777Q9ULD5 760 aaPredicted RBP17.17■□□□□ 0.34
XRCC3-216ENST00000556682 CCNB3Q8WWL7 1395 aa17.15■□□□□ 0.34
XRCC3-216ENST00000556682 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-216ENST00000556682 ATP10AO60312 1499 aa17.15■□□□□ 0.34
XRCC3-216ENST00000556682 PREX2Q70Z35 1606 aa17.13■□□□□ 0.33
XRCC3-216ENST00000556682 ADAMTSL3P82987 1691 aa17.13■□□□□ 0.33
XRCC3-216ENST00000556682 C9orf84Q5VXU9 1444 aa17.13■□□□□ 0.33
XRCC3-216ENST00000556682 PTPRMP28827 1452 aa17.12■□□□□ 0.33
XRCC3-216ENST00000556682 GPATCH8Q9UKJ3 1502 aaKnown RBP17.12■□□□□ 0.33
XRCC3-216ENST00000556682 BCORL1Q5H9F3 1711 aa17.11■□□□□ 0.33
XRCC3-216ENST00000556682 CDC42BPBQ9Y5S2 1711 aa17.11■□□□□ 0.33
XRCC3-216ENST00000556682 MLECQ14165 292 aa17.11■□□□□ 0.33
XRCC3-216ENST00000556682 TRAPPC8Q9Y2L5 1435 aa17.09■□□□□ 0.33
XRCC3-216ENST00000556682 MLH3Q9UHC1 1453 aa17.09■□□□□ 0.33
XRCC3-216ENST00000556682 ABCC1P33527 1531 aa17.09■□□□□ 0.33
XRCC3-216ENST00000556682 KDM5CP41229 1560 aa17.09■□□□□ 0.33
XRCC3-216ENST00000556682 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
XRCC3-216ENST00000556682 PLEKHH2Q8IVE3 1493 aa17.08■□□□□ 0.32
XRCC3-216ENST00000556682 ARHGEF12Q9NZN5 1544 aa17.07■□□□□ 0.32
XRCC3-216ENST00000556682 VPS8Q8N3P4 1428 aa17.07■□□□□ 0.32
XRCC3-216ENST00000556682 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
XRCC3-216ENST00000556682 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.325e-6■■■■□ 20.3
XRCC3-216ENST00000556682 CDC42BPAQ5VT25 1732 aa17.07■□□□□ 0.32
XRCC3-216ENST00000556682 MADDQ8WXG6 1647 aa17.06■□□□□ 0.32
XRCC3-216ENST00000556682 HECW2Q9P2P5 1572 aa17.06■□□□□ 0.32
XRCC3-216ENST00000556682 SPAG9O60271 1321 aaKnown RBP17.05■□□□□ 0.32
XRCC3-216ENST00000556682 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
XRCC3-216ENST00000556682 ESF1Q9H501 851 aaKnown RBP17.03■□□□□ 0.32
XRCC3-216ENST00000556682 ITSN2Q9NZM3 1697 aa17.02■□□□□ 0.32
XRCC3-216ENST00000556682 APLP2Q06481 763 aa17.02■□□□□ 0.32
XRCC3-216ENST00000556682 SAMD9LQ8IVG5 1584 aa17.02■□□□□ 0.31
XRCC3-216ENST00000556682 SYCP2Q9BX26 1530 aa17.01■□□□□ 0.31
XRCC3-216ENST00000556682 DIP2CQ9Y2E4 1556 aa17■□□□□ 0.31
XRCC3-216ENST00000556682 REREQ9P2R6 1566 aa16.99■□□□□ 0.31
XRCC3-216ENST00000556682 RSPH4AQ5TD94 716 aa16.99■□□□□ 0.31
XRCC3-216ENST00000556682 RIMS1Q86UR5 1692 aaKnown RBP16.99■□□□□ 0.31
XRCC3-216ENST00000556682 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
XRCC3-216ENST00000556682 ZNF644Q9H582 1327 aaPredicted RBP16.98■□□□□ 0.31
XRCC3-216ENST00000556682 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
XRCC3-216ENST00000556682 SIGLEC1Q9BZZ2 1709 aa16.97■□□□□ 0.31
XRCC3-216ENST00000556682 AGLP35573 1532 aa16.96■□□□□ 0.31
XRCC3-216ENST00000556682 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
XRCC3-216ENST00000556682 SUPT6HQ7KZ85 1726 aaKnown RBP16.96■□□□□ 0.3
XRCC3-216ENST00000556682 ABCA6Q8N139 1617 aa16.96■□□□□ 0.3
XRCC3-216ENST00000556682 MAP3K1Q13233 1512 aa16.96■□□□□ 0.3
XRCC3-216ENST00000556682 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
XRCC3-216ENST00000556682 FER1L4A9Z1Z3 1794 aa16.93■□□□□ 0.3
XRCC3-216ENST00000556682 ATP7AQ04656 1500 aa16.93■□□□□ 0.3
XRCC3-216ENST00000556682 CEBPAP49715 358 aaPredicted RBP16.93■□□□□ 0.3
XRCC3-216ENST00000556682 KANK4Q5T7N3 995 aaPredicted RBP16.93■□□□□ 0.3
XRCC3-216ENST00000556682 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
XRCC3-216ENST00000556682 TSPY4P0CV99 314 aa16.92■□□□□ 0.3
XRCC3-216ENST00000556682 TSPY10P0CW01 314 aa16.92■□□□□ 0.3
XRCC3-216ENST00000556682 RTEL1-TNFRSF6BF6WH68 1400 aa16.92■□□□□ 0.3
XRCC3-216ENST00000556682 CNTLNQ9NXG0 1405 aa16.9■□□□□ 0.3
XRCC3-216ENST00000556682 A2MP01023 1474 aa16.9■□□□□ 0.3
XRCC3-216ENST00000556682 LMTK3Q96Q04 1460 aa16.9■□□□□ 0.3
XRCC3-216ENST00000556682 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
XRCC3-216ENST00000556682 CAMSAP2Q08AD1 1489 aa16.88■□□□□ 0.29
XRCC3-216ENST00000556682 CCDC141Q6ZP82 1450 aa16.88■□□□□ 0.29
XRCC3-216ENST00000556682 HSPA2P54652 639 aa16.88■□□□□ 0.29
XRCC3-216ENST00000556682 INO80Q9ULG1 1556 aaPredicted RBP16.87■□□□□ 0.29
XRCC3-216ENST00000556682 GGT6Q6P531 493 aa16.87■□□□□ 0.29
XRCC3-216ENST00000556682 MIA2Q96PC5 1412 aa16.86■□□□□ 0.29
XRCC3-216ENST00000556682 DHX29Q7Z478 1369 aaKnown RBP16.85■□□□□ 0.29
XRCC3-216ENST00000556682 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
XRCC3-216ENST00000556682 UHRF1BP1Q6BDS2 1440 aa16.83■□□□□ 0.28
XRCC3-216ENST00000556682 ZMYM3Q14202 1370 aa16.82■□□□□ 0.28
XRCC3-216ENST00000556682 PLXNC1O60486 1568 aa16.81■□□□□ 0.28
XRCC3-216ENST00000556682 KIF3BO15066 747 aa16.81■□□□□ 0.28
XRCC3-216ENST00000556682 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
XRCC3-216ENST00000556682 ADGBQ8N7X0 1667 aa16.8■□□□□ 0.28
XRCC3-216ENST00000556682 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
XRCC3-216ENST00000556682 SETD1BQ9UPS6 1966 aaKnown RBP16.78■□□□□ 0.28
XRCC3-216ENST00000556682 NPATQ14207 1427 aa16.78■□□□□ 0.28
XRCC3-216ENST00000556682 PREX1Q8TCU6 1659 aa16.77■□□□□ 0.28
XRCC3-216ENST00000556682 C3P01024 1663 aa16.75■□□□□ 0.27
XRCC3-216ENST00000556682 ILDR1Q86SU0 546 aaPredicted RBP16.75■□□□□ 0.27
XRCC3-216ENST00000556682 WASHC2CQ9Y4E1 1318 aa16.74■□□□□ 0.27
XRCC3-216ENST00000556682 FOXD1Q16676 465 aa16.74■□□□□ 0.27
XRCC3-216ENST00000556682 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
XRCC3-216ENST00000556682 MAST1Q9Y2H9 1570 aa16.71■□□□□ 0.27
XRCC3-216ENST00000556682 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
XRCC3-216ENST00000556682 PTPRKQ15262 1439 aa16.7■□□□□ 0.26
XRCC3-216ENST00000556682 CLTCQ00610 1675 aaKnown RBP16.69■□□□□ 0.26
XRCC3-216ENST00000556682 FAM135AQ9P2D6 1515 aa16.69■□□□□ 0.26
XRCC3-216ENST00000556682 PTPN23Q9H3S7 1636 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms