RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 ZFYVE16Q7Z3T8 1539 aa35.17■■■■□ 3.22
SDR39U1-216ENST00000556175 SCAPERQ9BY12 1400 aa35.17■■■■□ 3.22
SDR39U1-216ENST00000556175 EFCAB2Q5VUJ9 269 aa35.17■■■■□ 3.22
SDR39U1-216ENST00000556175 PCF11O94913 1555 aaKnown RBP35.17■■■■□ 3.22
SDR39U1-216ENST00000556175 POGZQ7Z3K3 1410 aa35.16■■■■□ 3.22
SDR39U1-216ENST00000556175 PTPRMP28827 1452 aa35.15■■■■□ 3.22
SDR39U1-216ENST00000556175 MADDQ8WXG6 1647 aa35.1■■■■□ 3.21
SDR39U1-216ENST00000556175 ARHGAP5Q13017 1502 aa35.09■■■■□ 3.21
SDR39U1-216ENST00000556175 FYCO1Q9BQS8 1478 aa35.09■■■■□ 3.21
SDR39U1-216ENST00000556175 YEATS2Q9ULM3 1422 aa35.07■■■■□ 3.21
SDR39U1-216ENST00000556175 ZNF518AQ6AHZ1 1483 aa35.02■■■■□ 3.2
SDR39U1-216ENST00000556175 PREX2Q70Z35 1606 aa34.97■■■■□ 3.19
SDR39U1-216ENST00000556175 RIMS1Q86UR5 1692 aaKnown RBP34.97■■■■□ 3.19
SDR39U1-216ENST00000556175 ATP10AO60312 1499 aa34.96■■■■□ 3.19
SDR39U1-216ENST00000556175 CDC42BPBQ9Y5S2 1711 aa34.95■■■■□ 3.19
SDR39U1-216ENST00000556175 C9orf84Q5VXU9 1444 aa34.94■■■■□ 3.18
SDR39U1-216ENST00000556175 KDM5CP41229 1560 aa34.94■■■■□ 3.18
SDR39U1-216ENST00000556175 SIGLEC1Q9BZZ2 1709 aa34.94■■■■□ 3.18
SDR39U1-216ENST00000556175 ABCC1P33527 1531 aa34.86■■■■□ 3.17
SDR39U1-216ENST00000556175 AFAP1Q8N556 730 aa34.86■■■■□ 3.17
SDR39U1-216ENST00000556175 CDC42BPAQ5VT25 1732 aa34.84■■■■□ 3.17
SDR39U1-216ENST00000556175 FER1L4A9Z1Z3 1794 aa34.84■■■■□ 3.17
SDR39U1-216ENST00000556175 MLECQ14165 292 aa34.83■■■■□ 3.17
SDR39U1-216ENST00000556175 MYT1LQ9UL68 1186 aa34.82■■■■□ 3.16
SDR39U1-216ENST00000556175 MLH3Q9UHC1 1453 aa34.81■■■■□ 3.16
SDR39U1-216ENST00000556175 ITSN2Q9NZM3 1697 aa34.81■■■■□ 3.16
SDR39U1-216ENST00000556175 ARHGEF12Q9NZN5 1544 aa34.8■■■■□ 3.16
SDR39U1-216ENST00000556175 LMTK3Q96Q04 1460 aa34.78■■■■□ 3.16
SDR39U1-216ENST00000556175 DIP2CQ9Y2E4 1556 aa34.78■■■■□ 3.16
SDR39U1-216ENST00000556175 REREQ9P2R6 1566 aa34.77■■■■□ 3.16
SDR39U1-216ENST00000556175 TRAPPC8Q9Y2L5 1435 aa34.75■■■■□ 3.15
SDR39U1-216ENST00000556175 GPATCH8Q9UKJ3 1502 aaKnown RBP34.73■■■■□ 3.15
SDR39U1-216ENST00000556175 ABCA6Q8N139 1617 aa34.73■■■■□ 3.15
SDR39U1-216ENST00000556175 CEP162Q5TB80 1403 aa34.72■■■■□ 3.15
SDR39U1-216ENST00000556175 PLPPR3Q6T4P5 718 aa34.71■■■■□ 3.15
SDR39U1-216ENST00000556175 MTUS2Q5JR59 1369 aa34.71■■■■□ 3.15
SDR39U1-216ENST00000556175 ILDR1Q86SU0 546 aaPredicted RBP34.69■■■■□ 3.14
SDR39U1-216ENST00000556175 SAMD9LQ8IVG5 1584 aa34.68■■■■□ 3.14
SDR39U1-216ENST00000556175 ZNF777Q9ULD5 760 aaPredicted RBP34.67■■■■□ 3.14
SDR39U1-216ENST00000556175 CCNB3Q8WWL7 1395 aa34.66■■■■□ 3.14
SDR39U1-216ENST00000556175 AGLP35573 1532 aa34.65■■■■□ 3.14
SDR39U1-216ENST00000556175 PLEKHH2Q8IVE3 1493 aa34.65■■■■□ 3.14
SDR39U1-216ENST00000556175 SYCP2Q9BX26 1530 aa34.64■■■■□ 3.14
SDR39U1-216ENST00000556175 EHBP1L1Q8N3D4 1523 aa34.63■■■■□ 3.13
SDR39U1-216ENST00000556175 KIDINS220Q9ULH0 1771 aa34.63■■■■□ 3.13
SDR39U1-216ENST00000556175 CFDP1Q9UEE9 299 aaPredicted RBP34.62■■■■□ 3.13
SDR39U1-216ENST00000556175 KIAA1107Q9UPP5 1409 aa34.6■■■■□ 3.13
SDR39U1-216ENST00000556175 SPAG9O60271 1321 aaKnown RBP34.55■■■■□ 3.12
SDR39U1-216ENST00000556175 PREX1Q8TCU6 1659 aa34.54■■■■□ 3.12
SDR39U1-216ENST00000556175 HNRNPMP52272 730 aaKnown RBP eCLIP34.53■■■■□ 3.12
SDR39U1-216ENST00000556175 HSPA2P54652 639 aa34.53■■■■□ 3.12
SDR39U1-216ENST00000556175 ESF1Q9H501 851 aaKnown RBP34.52■■■■□ 3.12
SDR39U1-216ENST00000556175 TIAM1Q13009 1591 aa34.52■■■■□ 3.12
SDR39U1-216ENST00000556175 ATP7AQ04656 1500 aa34.5■■■■□ 3.11
SDR39U1-216ENST00000556175 CEBPAP49715 358 aaPredicted RBP34.49■■■■□ 3.11
SDR39U1-216ENST00000556175 INO80Q9ULG1 1556 aaPredicted RBP34.47■■■■□ 3.11
SDR39U1-216ENST00000556175 CNTLNQ9NXG0 1405 aa34.46■■■■□ 3.11
SDR39U1-216ENST00000556175 C3P01024 1663 aa34.42■■■■□ 3.1
SDR39U1-216ENST00000556175 UHRF1BP1Q6BDS2 1440 aa34.42■■■■□ 3.1
SDR39U1-216ENST00000556175 SUPT6HQ7KZ85 1726 aaKnown RBP34.41■■■■□ 3.1
SDR39U1-216ENST00000556175 SETD1BQ9UPS6 1966 aaKnown RBP34.41■■■■□ 3.1
SDR39U1-216ENST00000556175 PLXNC1O60486 1568 aa34.38■■■■□ 3.09
SDR39U1-216ENST00000556175 A2MP01023 1474 aa34.38■■■■□ 3.09
SDR39U1-216ENST00000556175 VPS8Q8N3P4 1428 aa34.38■■■■□ 3.09
SDR39U1-216ENST00000556175 NCOA2Q15596 1464 aa34.37■■■■□ 3.09
SDR39U1-216ENST00000556175 FBXO41Q8TF61 875 aa34.35■■■■□ 3.09
SDR39U1-216ENST00000556175 ZNF644Q9H582 1327 aaPredicted RBP34.34■■■■□ 3.09
SDR39U1-216ENST00000556175 MBD5Q9P267 1494 aa34.34■■■■□ 3.09
SDR39U1-216ENST00000556175 MROH2AA6NES4 1674 aa34.34■■■■□ 3.09
SDR39U1-216ENST00000556175 ADGBQ8N7X0 1667 aa34.34■■■■□ 3.09
SDR39U1-216ENST00000556175 LOC105371045A0A1W2PR82 267 aa34.33■■■■□ 3.09
SDR39U1-216ENST00000556175 RTEL1-TNFRSF6BF6WH68 1400 aa34.3■■■■□ 3.08
SDR39U1-216ENST00000556175 CAMSAP2Q08AD1 1489 aa34.27■■■■□ 3.08
SDR39U1-216ENST00000556175 CCDC141Q6ZP82 1450 aa34.26■■■■□ 3.07
SDR39U1-216ENST00000556175 NPATQ14207 1427 aa34.25■■■■□ 3.07
SDR39U1-216ENST00000556175 RSPH4AQ5TD94 716 aa34.24■■■■□ 3.07
SDR39U1-216ENST00000556175 DMRT2Q9Y5R5 561 aa34.24■■■■□ 3.07
SDR39U1-216ENST00000556175 LRRC9Q6ZRR7 1453 aa34.24■■■■□ 3.07
SDR39U1-216ENST00000556175 ZMYM3Q14202 1370 aa34.23■■■■□ 3.07
SDR39U1-216ENST00000556175 MAP3K1Q13233 1512 aa34.21■■■■□ 3.07
SDR39U1-216ENST00000556175 CLTCQ00610 1675 aaKnown RBP34.21■■■■□ 3.07
SDR39U1-216ENST00000556175 PPP6R1Q9UPN7 881 aa34.2■■■■□ 3.07
SDR39U1-216ENST00000556175 STRCQ7RTU9 1775 aa34.19■■■■□ 3.06
SDR39U1-216ENST00000556175 GGT6Q6P531 493 aa34.18■■■■□ 3.06
SDR39U1-216ENST00000556175 DHX29Q7Z478 1369 aaKnown RBP34.16■■■■□ 3.06
SDR39U1-216ENST00000556175 ARHGEF5Q12774 1597 aa34.15■■■■□ 3.06
SDR39U1-216ENST00000556175 CERKQ8TCT0 537 aa34.09■■■■□ 3.05
SDR39U1-216ENST00000556175 PTPRTO14522 1441 aa34.08■■■■□ 3.05
SDR39U1-216ENST00000556175 TSPY4P0CV99 314 aa34.08■■■■□ 3.05
SDR39U1-216ENST00000556175 TSPY10P0CW01 314 aa34.08■■■■□ 3.05
SDR39U1-216ENST00000556175 PTPRKQ15262 1439 aa34.06■■■■□ 3.04
SDR39U1-216ENST00000556175 FAM135AQ9P2D6 1515 aa34.06■■■■□ 3.04
SDR39U1-216ENST00000556175 NCOA1Q15788 1441 aa34.05■■■■□ 3.04
SDR39U1-216ENST00000556175 MYO3AQ8NEV4 1616 aa34.04■■■■□ 3.04
SDR39U1-216ENST00000556175 MIA2Q96PC5 1412 aa34.04■■■■□ 3.04
SDR39U1-216ENST00000556175 KANK4Q5T7N3 995 aaPredicted RBP34.03■■■■□ 3.04
SDR39U1-216ENST00000556175 ZNF142P52746 1687 aaPredicted RBP34.03■■■■□ 3.04
SDR39U1-216ENST00000556175 KIF3BO15066 747 aa34.02■■■■□ 3.04
SDR39U1-216ENST00000556175 MYOM3Q5VTT5 1437 aa34.02■■■■□ 3.04
SDR39U1-216ENST00000556175 CAMSAP1Q5T5Y3 1602 aa34.01■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms