RNA–Protein interactions for RNA: ENST00000556093.1

TMEM55B-206, humanhuman

TSL 2

Gene TMEM55B, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-206ENST00000556093 RAPGEF3O95398 923 aa20.72■□□□□ 0.91
TMEM55B-206ENST00000556093 ARHGEF40Q8TER5 1519 aa20.72■□□□□ 0.91
TMEM55B-206ENST00000556093 VPS8Q8N3P4 1428 aa20.7■□□□□ 0.9
TMEM55B-206ENST00000556093 EHBP1L1Q8N3D4 1523 aa20.7■□□□□ 0.9
TMEM55B-206ENST00000556093 POGZQ7Z3K3 1410 aa20.7■□□□□ 0.9
TMEM55B-206ENST00000556093 KDM4FA0A1W2PPD8 638 aa20.68■□□□□ 0.9
TMEM55B-206ENST00000556093 EFCAB2Q5VUJ9 269 aa20.68■□□□□ 0.9
TMEM55B-206ENST00000556093 SCAPERQ9BY12 1400 aa20.68■□□□□ 0.9
TMEM55B-206ENST00000556093 MTUS2Q5JR59 1369 aa20.67■□□□□ 0.9
TMEM55B-206ENST00000556093 TIAM1Q13009 1591 aa20.64■□□□□ 0.9
TMEM55B-206ENST00000556093 ABCC1P33527 1531 aa20.64■□□□□ 0.9
TMEM55B-206ENST00000556093 ZFYVE16Q7Z3T8 1539 aa20.64■□□□□ 0.9
TMEM55B-206ENST00000556093 MAGI2Q86UL8 1455 aa20.63■□□□□ 0.89
TMEM55B-206ENST00000556093 ITSN2Q9NZM3 1697 aa20.63■□□□□ 0.89
TMEM55B-206ENST00000556093 KDM5CP41229 1560 aa20.63■□□□□ 0.89
TMEM55B-206ENST00000556093 ZNF518AQ6AHZ1 1483 aa20.62■□□□□ 0.89
TMEM55B-206ENST00000556093 GPATCH8Q9UKJ3 1502 aaKnown RBP20.61■□□□□ 0.89
TMEM55B-206ENST00000556093 SAMD9LQ8IVG5 1584 aa20.59■□□□□ 0.89
TMEM55B-206ENST00000556093 SUPT6HQ7KZ85 1726 aaKnown RBP20.58■□□□□ 0.89
TMEM55B-206ENST00000556093 YEATS2Q9ULM3 1422 aa20.58■□□□□ 0.88
TMEM55B-206ENST00000556093 HECW2Q9P2P5 1572 aa20.58■□□□□ 0.88
TMEM55B-206ENST00000556093 CCNB3Q8WWL7 1395 aa20.58■□□□□ 0.88
TMEM55B-206ENST00000556093 BCORL1Q5H9F3 1711 aa20.56■□□□□ 0.88
TMEM55B-206ENST00000556093 MAP3K1Q13233 1512 aa20.56■□□□□ 0.88
TMEM55B-206ENST00000556093 ARHGEF12Q9NZN5 1544 aa20.55■□□□□ 0.88
TMEM55B-206ENST00000556093 ADAMTSL3P82987 1691 aa20.54■□□□□ 0.88
TMEM55B-206ENST00000556093 SYCP2Q9BX26 1530 aa20.54■□□□□ 0.88
TMEM55B-206ENST00000556093 SIGLEC1Q9BZZ2 1709 aa20.53■□□□□ 0.88
TMEM55B-206ENST00000556093 NCOA2Q15596 1464 aa20.52■□□□□ 0.88
TMEM55B-206ENST00000556093 LRRC9Q6ZRR7 1453 aa20.52■□□□□ 0.88
TMEM55B-206ENST00000556093 PLEKHH2Q8IVE3 1493 aa20.52■□□□□ 0.88
TMEM55B-206ENST00000556093 TRAPPC8Q9Y2L5 1435 aa20.52■□□□□ 0.87
TMEM55B-206ENST00000556093 DIP2CQ9Y2E4 1556 aa20.51■□□□□ 0.87
TMEM55B-206ENST00000556093 MLH3Q9UHC1 1453 aa20.5■□□□□ 0.87
TMEM55B-206ENST00000556093 C9orf84Q5VXU9 1444 aa20.5■□□□□ 0.87
TMEM55B-206ENST00000556093 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
TMEM55B-206ENST00000556093 CFDP1Q9UEE9 299 aaPredicted RBP20.49■□□□□ 0.87
TMEM55B-206ENST00000556093 ATP10AO60312 1499 aa20.49■□□□□ 0.87
TMEM55B-206ENST00000556093 KIAA1107Q9UPP5 1409 aa20.48■□□□□ 0.87
TMEM55B-206ENST00000556093 AFAP1Q8N556 730 aa20.48■□□□□ 0.87
TMEM55B-206ENST00000556093 MADDQ8WXG6 1647 aa20.48■□□□□ 0.87
TMEM55B-206ENST00000556093 ARID4BQ4LE39 1312 aaPredicted RBP20.48■□□□□ 0.87
TMEM55B-206ENST00000556093 REREQ9P2R6 1566 aa20.47■□□□□ 0.87
TMEM55B-206ENST00000556093 ZNF777Q9ULD5 760 aaPredicted RBP20.47■□□□□ 0.87
TMEM55B-206ENST00000556093 KIDINS220Q9ULH0 1771 aa20.46■□□□□ 0.87
TMEM55B-206ENST00000556093 INO80Q9ULG1 1556 aaPredicted RBP20.44■□□□□ 0.86
TMEM55B-206ENST00000556093 RIMS1Q86UR5 1692 aaKnown RBP20.42■□□□□ 0.86
TMEM55B-206ENST00000556093 FER1L4A9Z1Z3 1794 aa20.41■□□□□ 0.86
TMEM55B-206ENST00000556093 PTPRMP28827 1452 aa20.41■□□□□ 0.86
TMEM55B-206ENST00000556093 CAMSAP2Q08AD1 1489 aa20.41■□□□□ 0.86
TMEM55B-206ENST00000556093 ATP7AQ04656 1500 aa20.41■□□□□ 0.86
TMEM55B-206ENST00000556093 MYT1LQ9UL68 1186 aa20.4■□□□□ 0.86
TMEM55B-206ENST00000556093 MBD5Q9P267 1494 aa20.38■□□□□ 0.85
TMEM55B-206ENST00000556093 HNRNPMP52272 730 aaKnown RBP eCLIP20.38■□□□□ 0.85
TMEM55B-206ENST00000556093 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
TMEM55B-206ENST00000556093 AGLP35573 1532 aa20.37■□□□□ 0.85
TMEM55B-206ENST00000556093 SPAG9O60271 1321 aaKnown RBP20.36■□□□□ 0.85
TMEM55B-206ENST00000556093 ZNF644Q9H582 1327 aaPredicted RBP20.36■□□□□ 0.85
TMEM55B-206ENST00000556093 APLP2Q06481 763 aa20.36■□□□□ 0.85
TMEM55B-206ENST00000556093 MYOM3Q5VTT5 1437 aa20.35■□□□□ 0.85
TMEM55B-206ENST00000556093 ARHGEF5Q12774 1597 aa20.34■□□□□ 0.85
TMEM55B-206ENST00000556093 CCDC141Q6ZP82 1450 aa20.34■□□□□ 0.85
TMEM55B-206ENST00000556093 PLXNC1O60486 1568 aa20.34■□□□□ 0.85
TMEM55B-206ENST00000556093 ADGBQ8N7X0 1667 aa20.33■□□□□ 0.85
TMEM55B-206ENST00000556093 MIA2Q96PC5 1412 aa20.32■□□□□ 0.84
TMEM55B-206ENST00000556093 MLECQ14165 292 aa20.3■□□□□ 0.84
TMEM55B-206ENST00000556093 RTEL1-TNFRSF6BF6WH68 1400 aa20.29■□□□□ 0.84
TMEM55B-206ENST00000556093 A2MP01023 1474 aa20.28■□□□□ 0.84
TMEM55B-206ENST00000556093 RSPH4AQ5TD94 716 aa20.25■□□□□ 0.83
TMEM55B-206ENST00000556093 MAST1Q9Y2H9 1570 aa20.24■□□□□ 0.83
TMEM55B-206ENST00000556093 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
TMEM55B-206ENST00000556093 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
TMEM55B-206ENST00000556093 FGD6Q6ZV73 1430 aa20.2■□□□□ 0.82
TMEM55B-206ENST00000556093 MROH2AA6NES4 1674 aa20.19■□□□□ 0.82
TMEM55B-206ENST00000556093 C3P01024 1663 aa20.19■□□□□ 0.82
TMEM55B-206ENST00000556093 CNTLNQ9NXG0 1405 aa20.19■□□□□ 0.82
TMEM55B-206ENST00000556093 TCOF1Q13428 1488 aaKnown RBP20.18■□□□□ 0.82
TMEM55B-206ENST00000556093 LMTK3Q96Q04 1460 aa20.18■□□□□ 0.82
TMEM55B-206ENST00000556093 SHANK2Q9UPX8 1470 aa20.17■□□□□ 0.82
TMEM55B-206ENST00000556093 DNMT1P26358 1616 aaKnown RBP20.16■□□□□ 0.82
TMEM55B-206ENST00000556093 PREX1Q8TCU6 1659 aa20.16■□□□□ 0.82
TMEM55B-206ENST00000556093 DHX29Q7Z478 1369 aaKnown RBP20.16■□□□□ 0.82
TMEM55B-206ENST00000556093 TSPY4P0CV99 314 aa20.15■□□□□ 0.82
TMEM55B-206ENST00000556093 TSPY10P0CW01 314 aa20.15■□□□□ 0.82
TMEM55B-206ENST00000556093 CLTCQ00610 1675 aaKnown RBP20.15■□□□□ 0.82
TMEM55B-206ENST00000556093 ESF1Q9H501 851 aaKnown RBP20.14■□□□□ 0.81
TMEM55B-206ENST00000556093 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
TMEM55B-206ENST00000556093 EIF2AK4Q9P2K8 1649 aaKnown RBP20.12■□□□□ 0.81
TMEM55B-206ENST00000556093 SETD1BQ9UPS6 1966 aaKnown RBP20.12■□□□□ 0.81
TMEM55B-206ENST00000556093 FAM135AQ9P2D6 1515 aa20.12■□□□□ 0.81
TMEM55B-206ENST00000556093 DAPK1P53355 1430 aa20.1■□□□□ 0.81
TMEM55B-206ENST00000556093 ABCC5O15440 1437 aa20.1■□□□□ 0.81
TMEM55B-206ENST00000556093 RNF17Q9BXT8 1623 aaKnown RBP20.09■□□□□ 0.81
TMEM55B-206ENST00000556093 CEBPAP49715 358 aaPredicted RBP20.09■□□□□ 0.81
TMEM55B-206ENST00000556093 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
TMEM55B-206ENST00000556093 DUOX2Q9NRD8 1548 aa20.07■□□□□ 0.8
TMEM55B-206ENST00000556093 GGT6Q6P531 493 aa20.06■□□□□ 0.8
TMEM55B-206ENST00000556093 PPP6R1Q9UPN7 881 aa20.06■□□□□ 0.8
TMEM55B-206ENST00000556093 NPATQ14207 1427 aa20.04■□□□□ 0.8
TMEM55B-206ENST00000556093 UHRF1BP1Q6BDS2 1440 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms