RNA–Protein interactions for RNA: ENST00000556093.1

TMEM55B-206, humanhuman

TSL 2

Gene TMEM55B, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-206ENST00000556093 NISCHQ9Y2I1 1504 aa31.8■■■□□ 2.68
TMEM55B-206ENST00000556093 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
TMEM55B-206ENST00000556093 ABCC9O60706 1549 aa27.82■■■□□ 2.04
TMEM55B-206ENST00000556093 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
TMEM55B-206ENST00000556093 NACADO15069 1562 aa26.71■■□□□ 1.87
TMEM55B-206ENST00000556093 MYO15BQ96JP2 1530 aa26.52■■□□□ 1.84
TMEM55B-206ENST00000556093 ZCCHC6Q5VYS8 1495 aaKnown RBP26.5■■□□□ 1.83
TMEM55B-206ENST00000556093 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
TMEM55B-206ENST00000556093 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
TMEM55B-206ENST00000556093 UNC13AQ9UPW8 1703 aa26.22■■□□□ 1.79
TMEM55B-206ENST00000556093 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.75
TMEM55B-206ENST00000556093 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
TMEM55B-206ENST00000556093 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
TMEM55B-206ENST00000556093 SHROOM4Q9ULL8 1493 aa25.74■■□□□ 1.71
TMEM55B-206ENST00000556093 DNAJC5BQ9UF47 199 aa25.56■■□□□ 1.68
TMEM55B-206ENST00000556093 EIF4G1Q04637 1599 aaKnown RBP25.29■■□□□ 1.64
TMEM55B-206ENST00000556093 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
TMEM55B-206ENST00000556093 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
TMEM55B-206ENST00000556093 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
TMEM55B-206ENST00000556093 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
TMEM55B-206ENST00000556093 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
TMEM55B-206ENST00000556093 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
TMEM55B-206ENST00000556093 ATAD2BQ9ULI0 1458 aa24.59■■□□□ 1.53
TMEM55B-206ENST00000556093 HMGXB3Q12766 1538 aa24.54■■□□□ 1.52
TMEM55B-206ENST00000556093 PEG3Q9GZU2 1588 aa24.52■■□□□ 1.52
TMEM55B-206ENST00000556093 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
TMEM55B-206ENST00000556093 BAZ1BQ9UIG0 1483 aaKnown RBP24.41■■□□□ 1.5
TMEM55B-206ENST00000556093 WIZO95785 1651 aa24.25■■□□□ 1.47
TMEM55B-206ENST00000556093 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
TMEM55B-206ENST00000556093 NESP48681 1621 aa24.04■■□□□ 1.44
TMEM55B-206ENST00000556093 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
TMEM55B-206ENST00000556093 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
TMEM55B-206ENST00000556093 TOP2AP11388 1531 aaKnown RBP24.01■■□□□ 1.43
TMEM55B-206ENST00000556093 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
TMEM55B-206ENST00000556093 CUX2O14529 1486 aa23.84■■□□□ 1.41
TMEM55B-206ENST00000556093 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.41
TMEM55B-206ENST00000556093 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
TMEM55B-206ENST00000556093 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
TMEM55B-206ENST00000556093 CFTRP13569 1480 aa23.72■■□□□ 1.39
TMEM55B-206ENST00000556093 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
TMEM55B-206ENST00000556093 PRDM2Q13029 1718 aa23.65■■□□□ 1.38
TMEM55B-206ENST00000556093 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
TMEM55B-206ENST00000556093 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
TMEM55B-206ENST00000556093 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
TMEM55B-206ENST00000556093 WDR62O43379 1518 aa23.57■■□□□ 1.36
TMEM55B-206ENST00000556093 URB2Q14146 1524 aaKnown RBP23.39■■□□□ 1.34
TMEM55B-206ENST00000556093 SUPT5HO00267 1087 aaKnown RBP23.34■■□□□ 1.33
TMEM55B-206ENST00000556093 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
TMEM55B-206ENST00000556093 DNMBPQ6XZF7 1577 aa23.23■■□□□ 1.31
TMEM55B-206ENST00000556093 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
TMEM55B-206ENST00000556093 DNAJC5Q9H3Z4 198 aa23.15■■□□□ 1.3
TMEM55B-206ENST00000556093 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
TMEM55B-206ENST00000556093 POLA1P09884 1462 aaPredicted RBP23.02■■□□□ 1.28
TMEM55B-206ENST00000556093 TARBP1Q13395 1621 aaKnown RBP23.01■■□□□ 1.27
TMEM55B-206ENST00000556093 CUX1P39880 1505 aa23■■□□□ 1.27
TMEM55B-206ENST00000556093 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
TMEM55B-206ENST00000556093 EIF4G3O43432 1585 aaKnown RBP22.98■■□□□ 1.27
TMEM55B-206ENST00000556093 FGD5Q6ZNL6 1462 aa22.95■■□□□ 1.26
TMEM55B-206ENST00000556093 RAD54L2Q9Y4B4 1467 aa22.88■■□□□ 1.25
TMEM55B-206ENST00000556093 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
TMEM55B-206ENST00000556093 SOGA1O94964 1423 aa22.87■■□□□ 1.25
TMEM55B-206ENST00000556093 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
TMEM55B-206ENST00000556093 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.244e-8■■■■■ 34.1
TMEM55B-206ENST00000556093 TOP2BQ02880 1626 aa22.8■■□□□ 1.24
TMEM55B-206ENST00000556093 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
TMEM55B-206ENST00000556093 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
TMEM55B-206ENST00000556093 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
TMEM55B-206ENST00000556093 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
TMEM55B-206ENST00000556093 CHD1O14646 1710 aa22.72■■□□□ 1.23
TMEM55B-206ENST00000556093 OSCARQ8IYS5 282 aa22.72■■□□□ 1.23
TMEM55B-206ENST00000556093 PBRM1Q86U86 1689 aa22.69■■□□□ 1.22
TMEM55B-206ENST00000556093 ABCA5Q8WWZ7 1642 aa22.69■■□□□ 1.22
TMEM55B-206ENST00000556093 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
TMEM55B-206ENST00000556093 SNAPC4Q5SXM2 1469 aa22.66■■□□□ 1.22
TMEM55B-206ENST00000556093 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
TMEM55B-206ENST00000556093 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
TMEM55B-206ENST00000556093 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
TMEM55B-206ENST00000556093 FBLN2P98095 1184 aa22.52■■□□□ 1.2
TMEM55B-206ENST00000556093 ADAMTS12P58397 1594 aa22.49■■□□□ 1.19
TMEM55B-206ENST00000556093 RIMBP3CA6NJZ7 1639 aa22.48■■□□□ 1.19
TMEM55B-206ENST00000556093 RIMBP3BA6NNM3 1639 aa22.48■■□□□ 1.19
TMEM55B-206ENST00000556093 RIMBP3Q9UFD9 1639 aa22.48■■□□□ 1.19
TMEM55B-206ENST00000556093 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
TMEM55B-206ENST00000556093 CHMP7Q8WUX9 453 aaPredicted RBP22.46■■□□□ 1.19
TMEM55B-206ENST00000556093 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
TMEM55B-206ENST00000556093 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
TMEM55B-206ENST00000556093 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
TMEM55B-206ENST00000556093 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
TMEM55B-206ENST00000556093 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
TMEM55B-206ENST00000556093 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
TMEM55B-206ENST00000556093 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
TMEM55B-206ENST00000556093 NUP160Q12769 1436 aa22.29■■□□□ 1.16
TMEM55B-206ENST00000556093 CUL7Q14999 1698 aa22.28■■□□□ 1.16
TMEM55B-206ENST00000556093 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
TMEM55B-206ENST00000556093 IGF1RP08069 1367 aa22.19■■□□□ 1.14
TMEM55B-206ENST00000556093 SHROOM2Q13796 1616 aa22.19■■□□□ 1.14
TMEM55B-206ENST00000556093 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
TMEM55B-206ENST00000556093 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
TMEM55B-206ENST00000556093 ERCC6L2Q5T890 1561 aa22.09■■□□□ 1.13
TMEM55B-206ENST00000556093 CARMIL1Q5VZK9 1371 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms