RNA–Protein interactions for RNA: ENST00000556092.5

SEC23A-212, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-212ENST00000556092 CASKIN1Q8WXD9 1431 aa23.03■■□□□ 1.28
SEC23A-212ENST00000556092 CCDC18Q5T9S5 1454 aa23.03■■□□□ 1.28
SEC23A-212ENST00000556092 POGZQ7Z3K3 1410 aa23.02■■□□□ 1.28
SEC23A-212ENST00000556092 SCAPERQ9BY12 1400 aa23.02■■□□□ 1.28
SEC23A-212ENST00000556092 PTPRMP28827 1452 aa23.02■■□□□ 1.28
SEC23A-212ENST00000556092 SIGLEC1Q9BZZ2 1709 aa23.02■■□□□ 1.28
SEC23A-212ENST00000556092 RIMS1Q86UR5 1692 aaKnown RBP23.01■■□□□ 1.27
SEC23A-212ENST00000556092 ARHGAP5Q13017 1502 aa23.01■■□□□ 1.27
SEC23A-212ENST00000556092 YEATS2Q9ULM3 1422 aa23■■□□□ 1.27
SEC23A-212ENST00000556092 CDC42BPBQ9Y5S2 1711 aa23■■□□□ 1.27
SEC23A-212ENST00000556092 MAGI2Q86UL8 1455 aa22.98■■□□□ 1.27
SEC23A-212ENST00000556092 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
SEC23A-212ENST00000556092 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
SEC23A-212ENST00000556092 EFCAB2Q5VUJ9 269 aa22.96■■□□□ 1.27
SEC23A-212ENST00000556092 CDC42BPAQ5VT25 1732 aa22.94■■□□□ 1.26
SEC23A-212ENST00000556092 FER1L4A9Z1Z3 1794 aa22.93■■□□□ 1.26
SEC23A-212ENST00000556092 ZNF518AQ6AHZ1 1483 aa22.92■■□□□ 1.26
SEC23A-212ENST00000556092 KDM5CP41229 1560 aa22.9■■□□□ 1.26
SEC23A-212ENST00000556092 ITSN2Q9NZM3 1697 aa22.9■■□□□ 1.26
SEC23A-212ENST00000556092 ABCC1P33527 1531 aa22.87■■□□□ 1.25
SEC23A-212ENST00000556092 C9orf84Q5VXU9 1444 aa22.87■■□□□ 1.25
SEC23A-212ENST00000556092 ATP10AO60312 1499 aa22.86■■□□□ 1.25
SEC23A-212ENST00000556092 DIP2CQ9Y2E4 1556 aa22.83■■□□□ 1.25
SEC23A-212ENST00000556092 ABCA6Q8N139 1617 aa22.82■■□□□ 1.24
SEC23A-212ENST00000556092 MLECQ14165 292 aa22.82■■□□□ 1.24
SEC23A-212ENST00000556092 AFAP1Q8N556 730 aa22.81■■□□□ 1.24
SEC23A-212ENST00000556092 MYT1LQ9UL68 1186 aa22.8■■□□□ 1.24
SEC23A-212ENST00000556092 ARHGEF12Q9NZN5 1544 aa22.8■■□□□ 1.24
SEC23A-212ENST00000556092 LMTK3Q96Q04 1460 aa22.79■■□□□ 1.24
SEC23A-212ENST00000556092 PLPPR3Q6T4P5 718 aa22.79■■□□□ 1.24
SEC23A-212ENST00000556092 SAMD9LQ8IVG5 1584 aa22.78■■□□□ 1.24
SEC23A-212ENST00000556092 TRAPPC8Q9Y2L5 1435 aa22.78■■□□□ 1.24
SEC23A-212ENST00000556092 REREQ9P2R6 1566 aa22.76■■□□□ 1.23
SEC23A-212ENST00000556092 KIDINS220Q9ULH0 1771 aa22.76■■□□□ 1.23
SEC23A-212ENST00000556092 CEP162Q5TB80 1403 aa22.76■■□□□ 1.23
SEC23A-212ENST00000556092 MLH3Q9UHC1 1453 aa22.76■■□□□ 1.23
SEC23A-212ENST00000556092 SYCP2Q9BX26 1530 aa22.75■■□□□ 1.23
SEC23A-212ENST00000556092 GPATCH8Q9UKJ3 1502 aaKnown RBP22.74■■□□□ 1.23
SEC23A-212ENST00000556092 MTUS2Q5JR59 1369 aa22.73■■□□□ 1.23
SEC23A-212ENST00000556092 ZNF777Q9ULD5 760 aaPredicted RBP22.72■■□□□ 1.23
SEC23A-212ENST00000556092 EHBP1L1Q8N3D4 1523 aa22.72■■□□□ 1.23
SEC23A-212ENST00000556092 ILDR1Q86SU0 546 aaPredicted RBP22.71■■□□□ 1.23
SEC23A-212ENST00000556092 PREX1Q8TCU6 1659 aa22.68■■□□□ 1.22
SEC23A-212ENST00000556092 CCNB3Q8WWL7 1395 aa22.68■■□□□ 1.22
SEC23A-212ENST00000556092 TIAM1Q13009 1591 aa22.67■■□□□ 1.22
SEC23A-212ENST00000556092 AGLP35573 1532 aa22.67■■□□□ 1.22
SEC23A-212ENST00000556092 PLEKHH2Q8IVE3 1493 aa22.64■■□□□ 1.21
SEC23A-212ENST00000556092 C3P01024 1663 aa22.64■■□□□ 1.21
SEC23A-212ENST00000556092 INO80Q9ULG1 1556 aaPredicted RBP22.63■■□□□ 1.21
SEC23A-212ENST00000556092 HSPA2P54652 639 aa22.63■■□□□ 1.21
SEC23A-212ENST00000556092 CFDP1Q9UEE9 299 aaPredicted RBP22.63■■□□□ 1.21
SEC23A-212ENST00000556092 SUPT6HQ7KZ85 1726 aaKnown RBP22.62■■□□□ 1.21
SEC23A-212ENST00000556092 ATP7AQ04656 1500 aa22.62■■□□□ 1.21
SEC23A-212ENST00000556092 HNRNPMP52272 730 aaKnown RBP eCLIP22.61■■□□□ 1.21
SEC23A-212ENST00000556092 SETD1BQ9UPS6 1966 aaKnown RBP22.6■■□□□ 1.21
SEC23A-212ENST00000556092 KIAA1107Q9UPP5 1409 aa22.6■■□□□ 1.21
SEC23A-212ENST00000556092 CEBPAP49715 358 aaPredicted RBP22.6■■□□□ 1.21
SEC23A-212ENST00000556092 SPAG9O60271 1321 aaKnown RBP22.59■■□□□ 1.21
SEC23A-212ENST00000556092 ADGBQ8N7X0 1667 aa22.55■■□□□ 1.2
SEC23A-212ENST00000556092 PLXNC1O60486 1568 aa22.55■■□□□ 1.2
SEC23A-212ENST00000556092 ESF1Q9H501 851 aaKnown RBP22.54■■□□□ 1.2
SEC23A-212ENST00000556092 MROH2AA6NES4 1674 aa22.54■■□□□ 1.2
SEC23A-212ENST00000556092 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
SEC23A-212ENST00000556092 NCOA2Q15596 1464 aa22.53■■□□□ 1.2
SEC23A-212ENST00000556092 UHRF1BP1Q6BDS2 1440 aa22.52■■□□□ 1.2
SEC23A-212ENST00000556092 VPS8Q8N3P4 1428 aa22.52■■□□□ 1.2
SEC23A-212ENST00000556092 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
SEC23A-212ENST00000556092 CNTLNQ9NXG0 1405 aa22.51■■□□□ 1.19
SEC23A-212ENST00000556092 A2MP01023 1474 aa22.51■■□□□ 1.19
SEC23A-212ENST00000556092 CLTCQ00610 1675 aaKnown RBP22.5■■□□□ 1.19
SEC23A-212ENST00000556092 MBD5Q9P267 1494 aa22.49■■□□□ 1.19
SEC23A-212ENST00000556092 STRCQ7RTU9 1775 aa22.48■■□□□ 1.19
SEC23A-212ENST00000556092 CAMSAP2Q08AD1 1489 aa22.47■■□□□ 1.19
SEC23A-212ENST00000556092 CCDC141Q6ZP82 1450 aa22.43■■□□□ 1.18
SEC23A-212ENST00000556092 LRRC9Q6ZRR7 1453 aa22.43■■□□□ 1.18
SEC23A-212ENST00000556092 FBXO41Q8TF61 875 aa22.42■■□□□ 1.18
SEC23A-212ENST00000556092 RTEL1-TNFRSF6BF6WH68 1400 aa22.41■■□□□ 1.18
SEC23A-212ENST00000556092 ARHGEF5Q12774 1597 aa22.38■■□□□ 1.17
SEC23A-212ENST00000556092 NPATQ14207 1427 aa22.38■■□□□ 1.17
SEC23A-212ENST00000556092 ZMYM3Q14202 1370 aa22.38■■□□□ 1.17
SEC23A-212ENST00000556092 MAP3K1Q13233 1512 aa22.37■■□□□ 1.17
SEC23A-212ENST00000556092 GGT6Q6P531 493 aa22.37■■□□□ 1.17
SEC23A-212ENST00000556092 MYO3AQ8NEV4 1616 aa22.37■■□□□ 1.17
SEC23A-212ENST00000556092 ZNF142P52746 1687 aaPredicted RBP22.35■■□□□ 1.17
SEC23A-212ENST00000556092 DHX29Q7Z478 1369 aaKnown RBP22.33■■□□□ 1.17
SEC23A-212ENST00000556092 KANK4Q5T7N3 995 aaPredicted RBP22.31■■□□□ 1.16
SEC23A-212ENST00000556092 RSPH4AQ5TD94 716 aa22.31■■□□□ 1.16
SEC23A-212ENST00000556092 CAMSAP1Q5T5Y3 1602 aa22.31■■□□□ 1.16
SEC23A-212ENST00000556092 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
SEC23A-212ENST00000556092 PTPRKQ15262 1439 aa22.3■■□□□ 1.16
SEC23A-212ENST00000556092 NCOA1Q15788 1441 aa22.3■■□□□ 1.16
SEC23A-212ENST00000556092 CEP170BQ9Y4F5 1589 aaPredicted RBP22.29■■□□□ 1.16
SEC23A-212ENST00000556092 CERKQ8TCT0 537 aa22.28■■□□□ 1.16
SEC23A-212ENST00000556092 MYOM3Q5VTT5 1437 aa22.28■■□□□ 1.16
SEC23A-212ENST00000556092 MAST1Q9Y2H9 1570 aa22.28■■□□□ 1.16
SEC23A-212ENST00000556092 KDM5DQ9BY66 1539 aa22.27■■□□□ 1.16
SEC23A-212ENST00000556092 KIF3BO15066 747 aa22.27■■□□□ 1.16
SEC23A-212ENST00000556092 PPP6R1Q9UPN7 881 aa22.27■■□□□ 1.16
SEC23A-212ENST00000556092 PTPRTO14522 1441 aa22.26■■□□□ 1.15
SEC23A-212ENST00000556092 FAM135AQ9P2D6 1515 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms