RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 RICTORQ6R327 1708 aa24.83■■□□□ 1.57
SNX6-205ENST00000555648 FYCO1Q9BQS8 1478 aa24.83■■□□□ 1.56
SNX6-205ENST00000555648 ZMYM4Q5VZL5 1548 aa24.81■■□□□ 1.56
SNX6-205ENST00000555648 MYO5CQ9NQX4 1742 aa24.81■■□□□ 1.56
SNX6-205ENST00000555648 YEATS2Q9ULM3 1422 aa24.8■■□□□ 1.56
SNX6-205ENST00000555648 PTPRMP28827 1452 aa24.8■■□□□ 1.56
SNX6-205ENST00000555648 HECW2Q9P2P5 1572 aa24.79■■□□□ 1.56
SNX6-205ENST00000555648 MLECQ14165 292 aa24.77■■□□□ 1.56
SNX6-205ENST00000555648 ADAMTSL3P82987 1691 aa24.76■■□□□ 1.55
SNX6-205ENST00000555648 AFAP1Q8N556 730 aa24.75■■□□□ 1.55
SNX6-205ENST00000555648 ZNF518AQ6AHZ1 1483 aa24.75■■□□□ 1.55
SNX6-205ENST00000555648 BCORL1Q5H9F3 1711 aa24.75■■□□□ 1.55
SNX6-205ENST00000555648 LRRIQ1Q96JM4 1722 aa24.73■■□□□ 1.55
SNX6-205ENST00000555648 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
SNX6-205ENST00000555648 ATP10AO60312 1499 aa24.72■■□□□ 1.55
SNX6-205ENST00000555648 ZNF777Q9ULD5 760 aaPredicted RBP24.71■■□□□ 1.55
SNX6-205ENST00000555648 MADDQ8WXG6 1647 aa24.7■■□□□ 1.54
SNX6-205ENST00000555648 C9orf84Q5VXU9 1444 aa24.69■■□□□ 1.54
SNX6-205ENST00000555648 MTUS2Q5JR59 1369 aa24.68■■□□□ 1.54
SNX6-205ENST00000555648 CEP162Q5TB80 1403 aa24.67■■□□□ 1.54
SNX6-205ENST00000555648 PREX2Q70Z35 1606 aa24.64■■□□□ 1.53
SNX6-205ENST00000555648 CFDP1Q9UEE9 299 aaPredicted RBP24.63■■□□□ 1.53
SNX6-205ENST00000555648 CCNB3Q8WWL7 1395 aa24.63■■□□□ 1.53
SNX6-205ENST00000555648 TRAPPC8Q9Y2L5 1435 aa24.61■■□□□ 1.53
SNX6-205ENST00000555648 KDM5CP41229 1560 aa24.61■■□□□ 1.53
SNX6-205ENST00000555648 RIMS1Q86UR5 1692 aaKnown RBP24.61■■□□□ 1.53
SNX6-205ENST00000555648 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
SNX6-205ENST00000555648 ABCC1P33527 1531 aa24.6■■□□□ 1.53
SNX6-205ENST00000555648 GPATCH8Q9UKJ3 1502 aaKnown RBP24.59■■□□□ 1.53
SNX6-205ENST00000555648 MLH3Q9UHC1 1453 aa24.58■■□□□ 1.53
SNX6-205ENST00000555648 ESF1Q9H501 851 aaKnown RBP24.58■■□□□ 1.53
SNX6-205ENST00000555648 ARHGEF12Q9NZN5 1544 aa24.56■■□□□ 1.52
SNX6-205ENST00000555648 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
SNX6-205ENST00000555648 HNRNPMP52272 730 aaKnown RBP eCLIP24.55■■□□□ 1.52
SNX6-205ENST00000555648 SPAG9O60271 1321 aaKnown RBP24.54■■□□□ 1.52
SNX6-205ENST00000555648 PLEKHH2Q8IVE3 1493 aa24.53■■□□□ 1.52
SNX6-205ENST00000555648 SIGLEC1Q9BZZ2 1709 aa24.53■■□□□ 1.52
SNX6-205ENST00000555648 CDC42BPAQ5VT25 1732 aa24.52■■□□□ 1.52
SNX6-205ENST00000555648 DIP2CQ9Y2E4 1556 aa24.51■■□□□ 1.51
SNX6-205ENST00000555648 KIAA1107Q9UPP5 1409 aa24.5■■□□□ 1.51
SNX6-205ENST00000555648 LMTK3Q96Q04 1460 aa24.5■■□□□ 1.51
SNX6-205ENST00000555648 ITSN2Q9NZM3 1697 aa24.5■■□□□ 1.51
SNX6-205ENST00000555648 EHBP1L1Q8N3D4 1523 aa24.49■■□□□ 1.51
SNX6-205ENST00000555648 SYCP2Q9BX26 1530 aa24.49■■□□□ 1.51
SNX6-205ENST00000555648 FER1L4A9Z1Z3 1794 aa24.48■■□□□ 1.51
SNX6-205ENST00000555648 CEBPAP49715 358 aaPredicted RBP24.48■■□□□ 1.51
SNX6-205ENST00000555648 HSPA2P54652 639 aa24.48■■□□□ 1.51
SNX6-205ENST00000555648 ILDR1Q86SU0 546 aaPredicted RBP24.48■■□□□ 1.51
SNX6-205ENST00000555648 SAMD9LQ8IVG5 1584 aa24.47■■□□□ 1.51
SNX6-205ENST00000555648 REREQ9P2R6 1566 aa24.46■■□□□ 1.51
SNX6-205ENST00000555648 ABCA6Q8N139 1617 aa24.45■■□□□ 1.5
SNX6-205ENST00000555648 AGLP35573 1532 aa24.43■■□□□ 1.5
SNX6-205ENST00000555648 VPS8Q8N3P4 1428 aa24.41■■□□□ 1.5
SNX6-205ENST00000555648 ZNF644Q9H582 1327 aaPredicted RBP24.4■■□□□ 1.5
SNX6-205ENST00000555648 KIDINS220Q9ULH0 1771 aa24.39■■□□□ 1.49
SNX6-205ENST00000555648 TIAM1Q13009 1591 aa24.37■■□□□ 1.49
SNX6-205ENST00000555648 CNTLNQ9NXG0 1405 aa24.36■■□□□ 1.49
SNX6-205ENST00000555648 ATP7AQ04656 1500 aa24.36■■□□□ 1.49
SNX6-205ENST00000555648 NCOA2Q15596 1464 aa24.36■■□□□ 1.49
SNX6-205ENST00000555648 UHRF1BP1Q6BDS2 1440 aa24.35■■□□□ 1.49
SNX6-205ENST00000555648 A2MP01023 1474 aa24.33■■□□□ 1.49
SNX6-205ENST00000555648 APLP2Q06481 763 aa24.33■■□□□ 1.49
SNX6-205ENST00000555648 RSPH4AQ5TD94 716 aa24.33■■□□□ 1.49
SNX6-205ENST00000555648 GGT6Q6P531 493 aa24.32■■□□□ 1.48
SNX6-205ENST00000555648 SUPT6HQ7KZ85 1726 aaKnown RBP24.31■■□□□ 1.48
SNX6-205ENST00000555648 MBD5Q9P267 1494 aa24.3■■□□□ 1.48
SNX6-205ENST00000555648 LRRC9Q6ZRR7 1453 aa24.28■■□□□ 1.48
SNX6-205ENST00000555648 INO80Q9ULG1 1556 aaPredicted RBP24.28■■□□□ 1.48
SNX6-205ENST00000555648 RTEL1-TNFRSF6BF6WH68 1400 aa24.27■■□□□ 1.48
SNX6-205ENST00000555648 TSPY4P0CV99 314 aa24.27■■□□□ 1.48
SNX6-205ENST00000555648 TSPY10P0CW01 314 aa24.27■■□□□ 1.48
SNX6-205ENST00000555648 DMRT2Q9Y5R5 561 aa24.27■■□□□ 1.48
SNX6-205ENST00000555648 PREX1Q8TCU6 1659 aa24.26■■□□□ 1.47
SNX6-205ENST00000555648 ZMYM3Q14202 1370 aa24.26■■□□□ 1.47
SNX6-205ENST00000555648 CAMSAP2Q08AD1 1489 aa24.26■■□□□ 1.47
SNX6-205ENST00000555648 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
SNX6-205ENST00000555648 FBXO41Q8TF61 875 aa24.25■■□□□ 1.47
SNX6-205ENST00000555648 PPP6R1Q9UPN7 881 aa24.25■■□□□ 1.47
SNX6-205ENST00000555648 KANK4Q5T7N3 995 aaPredicted RBP24.23■■□□□ 1.47
SNX6-205ENST00000555648 DHX29Q7Z478 1369 aaKnown RBP24.22■■□□□ 1.47
SNX6-205ENST00000555648 C3P01024 1663 aa24.21■■□□□ 1.47
SNX6-205ENST00000555648 PLXNC1O60486 1568 aa24.2■■□□□ 1.47
SNX6-205ENST00000555648 MAP3K1Q13233 1512 aa24.2■■□□□ 1.47
SNX6-205ENST00000555648 KIF3BO15066 747 aa24.2■■□□□ 1.46
SNX6-205ENST00000555648 NPATQ14207 1427 aa24.18■■□□□ 1.46
SNX6-205ENST00000555648 SETD1BQ9UPS6 1966 aaKnown RBP24.18■■□□□ 1.46
SNX6-205ENST00000555648 ADGBQ8N7X0 1667 aa24.17■■□□□ 1.46
SNX6-205ENST00000555648 MROH2AA6NES4 1674 aa24.12■■□□□ 1.45
SNX6-205ENST00000555648 MYOM3Q5VTT5 1437 aa24.12■■□□□ 1.45
SNX6-205ENST00000555648 MIA2Q96PC5 1412 aa24.12■■□□□ 1.45
SNX6-205ENST00000555648 CERKQ8TCT0 537 aa24.12■■□□□ 1.45
SNX6-205ENST00000555648 ARHGEF5Q12774 1597 aa24.11■■□□□ 1.45
SNX6-205ENST00000555648 WASHC2CQ9Y4E1 1318 aa24.1■■□□□ 1.45
SNX6-205ENST00000555648 CLTCQ00610 1675 aaKnown RBP24.09■■□□□ 1.45
SNX6-205ENST00000555648 PTPRKQ15262 1439 aa24.08■■□□□ 1.44
SNX6-205ENST00000555648 PTPRTO14522 1441 aa24.05■■□□□ 1.44
SNX6-205ENST00000555648 NCOA1Q15788 1441 aa24.03■■□□□ 1.44
SNX6-205ENST00000555648 KDM5DQ9BY66 1539 aa24■■□□□ 1.43
SNX6-205ENST00000555648 PKD2Q13563 968 aa24■■□□□ 1.43
SNX6-205ENST00000555648 STRCQ7RTU9 1775 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms