RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
TUBB3-209ENST00000555609 KDM6BO15054 1643 aa22.55■■□□□ 1.2
TUBB3-209ENST00000555609 HSPA5P11021 654 aaKnown RBP22.54■■□□□ 1.2
TUBB3-209ENST00000555609 RAPGEF6Q8TEU7 1601 aa22.53■■□□□ 1.2
TUBB3-209ENST00000555609 ABCC5O15440 1437 aa22.53■■□□□ 1.2
TUBB3-209ENST00000555609 SYNJ2O15056 1496 aa22.52■■□□□ 1.2
TUBB3-209ENST00000555609 RPRD2Q5VT52 1461 aaKnown RBP22.52■■□□□ 1.2
TUBB3-209ENST00000555609 ANKRD30BQ9BXX2 1392 aa22.52■■□□□ 1.2
TUBB3-209ENST00000555609 NUP153P49790 1475 aaKnown RBP22.52■■□□□ 1.2
TUBB3-209ENST00000555609 WASHC2AQ641Q2 1341 aa22.5■■□□□ 1.19
TUBB3-209ENST00000555609 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
TUBB3-209ENST00000555609 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
TUBB3-209ENST00000555609 CNTLNQ9NXG0 1405 aa22.48■■□□□ 1.19
TUBB3-209ENST00000555609 L3MBTL2Q969R5 705 aa22.47■■□□□ 1.19
TUBB3-209ENST00000555609 TROQ12816 1431 aaPredicted RBP22.46■■□□□ 1.19
TUBB3-209ENST00000555609 NCOA1Q15788 1441 aa22.46■■□□□ 1.19
TUBB3-209ENST00000555609 DNAJC5Q9H3Z4 198 aa22.45■■□□□ 1.18
TUBB3-209ENST00000555609 ITSN2Q9NZM3 1697 aa22.43■■□□□ 1.18
TUBB3-209ENST00000555609 TEX14Q8IWB6 1497 aa22.43■■□□□ 1.18
TUBB3-209ENST00000555609 CCDC7Q96M83 1385 aa22.42■■□□□ 1.18
TUBB3-209ENST00000555609 ADCY10Q96PN6 1610 aa22.41■■□□□ 1.18
TUBB3-209ENST00000555609 ERICH6BQ5W0A0 696 aa22.41■■□□□ 1.18
TUBB3-209ENST00000555609 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
TUBB3-209ENST00000555609 ADGBQ8N7X0 1667 aa22.38■■□□□ 1.17
TUBB3-209ENST00000555609 SPATA31E1Q6ZUB1 1445 aa22.37■■□□□ 1.17
TUBB3-209ENST00000555609 CEP170Q5SW79 1584 aa22.37■■□□□ 1.17
TUBB3-209ENST00000555609 BCANQ96GW7 911 aa22.37■■□□□ 1.17
TUBB3-209ENST00000555609 SLC4A1APQ9BWU0 796 aaKnown RBP22.37■■□□□ 1.17
TUBB3-209ENST00000555609 CAMSAP2Q08AD1 1489 aa22.36■■□□□ 1.17
TUBB3-209ENST00000555609 POLR1AO95602 1720 aaPredicted RBP22.36■■□□□ 1.17
TUBB3-209ENST00000555609 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
TUBB3-209ENST00000555609 HNRNPUQ00839 825 aaKnown RBP eCLIP22.35■■□□□ 1.17
TUBB3-209ENST00000555609 GPATCH8Q9UKJ3 1502 aaKnown RBP22.34■■□□□ 1.17
TUBB3-209ENST00000555609 PZPP20742 1482 aa22.34■■□□□ 1.17
TUBB3-209ENST00000555609 CFDP1Q9UEE9 299 aaPredicted RBP22.33■■□□□ 1.17
TUBB3-209ENST00000555609 ZNF644Q9H582 1327 aaPredicted RBP22.32■■□□□ 1.16
TUBB3-209ENST00000555609 PRKRIP1Q9H875 184 aaPredicted RBP22.32■■□□□ 1.16
TUBB3-209ENST00000555609 ARID3CA6NKF2 412 aa22.31■■□□□ 1.16
TUBB3-209ENST00000555609 NBPF8Q3BBV2 869 aa22.31■■□□□ 1.16
TUBB3-209ENST00000555609 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
TUBB3-209ENST00000555609 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
TUBB3-209ENST00000555609 KIAA1107Q9UPP5 1409 aa22.3■■□□□ 1.16
TUBB3-209ENST00000555609 CROCC2H7BZ55 1655 aa22.3■■□□□ 1.16
TUBB3-209ENST00000555609 FOXD1Q16676 465 aa22.3■■□□□ 1.16
TUBB3-209ENST00000555609 ANKRD30AQ9BXX3 1397 aa22.3■■□□□ 1.16
TUBB3-209ENST00000555609 NUP160Q12769 1436 aa22.29■■□□□ 1.16
TUBB3-209ENST00000555609 ARID4BQ4LE39 1312 aaPredicted RBP22.29■■□□□ 1.16
TUBB3-209ENST00000555609 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
TUBB3-209ENST00000555609 SHANK2Q9UPX8 1470 aa22.27■■□□□ 1.16
TUBB3-209ENST00000555609 C11orf95C9JLR9 678 aaPredicted RBP22.26■■□□□ 1.15
TUBB3-209ENST00000555609 PLB1Q6P1J6 1458 aa22.24■■□□□ 1.15
TUBB3-209ENST00000555609 KIF7Q2M1P5 1343 aa22.24■■□□□ 1.15
TUBB3-209ENST00000555609 ANP32EQ9BTT0 268 aa22.23■■□□□ 1.15
TUBB3-209ENST00000555609 ZBED9Q6R2W3 1325 aa22.22■■□□□ 1.15
TUBB3-209ENST00000555609 KIF14Q15058 1648 aa22.21■■□□□ 1.15
TUBB3-209ENST00000555609 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
TUBB3-209ENST00000555609 UHRF1BP1Q6BDS2 1440 aa22.21■■□□□ 1.15
TUBB3-209ENST00000555609 ABCA8O94911 1581 aa22.21■■□□□ 1.15
TUBB3-209ENST00000555609 ANKRD50Q9ULJ7 1429 aa22.2■■□□□ 1.14
TUBB3-209ENST00000555609 KDM5DQ9BY66 1539 aa22.19■■□□□ 1.14
TUBB3-209ENST00000555609 RBM19Q9Y4C8 960 aaKnown RBP22.19■■□□□ 1.14
TUBB3-209ENST00000555609 RIMBP3CA6NJZ7 1639 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 RIMBP3BA6NNM3 1639 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 RIMBP3Q9UFD9 1639 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 PLEKHD1A6NEE1 506 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
TUBB3-209ENST00000555609 ARHGEF12Q9NZN5 1544 aa22.16■■□□□ 1.14
TUBB3-209ENST00000555609 ROCK2O75116 1388 aaKnown RBP22.16■■□□□ 1.14
TUBB3-209ENST00000555609 ERCC6L2Q5T890 1561 aa22.16■■□□□ 1.14
TUBB3-209ENST00000555609 PKD2Q13563 968 aa22.14■■□□□ 1.13
TUBB3-209ENST00000555609 PPP4R2Q9NY27 417 aa22.13■■□□□ 1.13
TUBB3-209ENST00000555609 USP47Q96K76 1375 aa22.13■■□□□ 1.13
TUBB3-209ENST00000555609 CCDC184Q52MB2 194 aa22.13■■□□□ 1.13
TUBB3-209ENST00000555609 CDC42BPAQ5VT25 1732 aa22.12■■□□□ 1.13
TUBB3-209ENST00000555609 RALGAPBQ86X10 1494 aa22.12■■□□□ 1.13
TUBB3-209ENST00000555609 ARHGEF5Q12774 1597 aa22.12■■□□□ 1.13
TUBB3-209ENST00000555609 C9orf84Q5VXU9 1444 aa22.12■■□□□ 1.13
TUBB3-209ENST00000555609 ATP10BO94823 1461 aa22.12■■□□□ 1.13
TUBB3-209ENST00000555609 KDM5CP41229 1560 aa22.11■■□□□ 1.13
TUBB3-209ENST00000555609 DHX29Q7Z478 1369 aaKnown RBP22.11■■□□□ 1.13
TUBB3-209ENST00000555609 ZNF777Q9ULD5 760 aaPredicted RBP22.11■■□□□ 1.13
TUBB3-209ENST00000555609 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 PTPRGP23470 1445 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 TSPY4P0CV99 314 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 TSPY10P0CW01 314 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 RSPH4AQ5TD94 716 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 FAM9BQ8IZU0 186 aa22.09■■□□□ 1.13
TUBB3-209ENST00000555609 NUP155O75694 1391 aa22.07■■□□□ 1.12
TUBB3-209ENST00000555609 KTN1Q86UP2 1357 aaKnown RBP22.05■■□□□ 1.12
TUBB3-209ENST00000555609 BCORL1Q5H9F3 1711 aa22.03■■□□□ 1.12
TUBB3-209ENST00000555609 FANCIQ9NVI1 1328 aa22.03■■□□□ 1.12
TUBB3-209ENST00000555609 SMG6Q86US8 1419 aaKnown RBP22.03■■□□□ 1.12
TUBB3-209ENST00000555609 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
TUBB3-209ENST00000555609 KIF15Q9NS87 1388 aa22■■□□□ 1.11
TUBB3-209ENST00000555609 CCDC141Q6ZP82 1450 aa21.98■■□□□ 1.11
TUBB3-209ENST00000555609 CARD11Q9BXL7 1154 aa21.96■■□□□ 1.11
TUBB3-209ENST00000555609 IRX6P78412 446 aaPredicted RBP21.94■■□□□ 1.1
TUBB3-209ENST00000555609 MAST1Q9Y2H9 1570 aa21.94■■□□□ 1.1
TUBB3-209ENST00000555609 PREX2Q70Z35 1606 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms