RNA–Protein interactions for RNA: ENST00000555088.5

GSKIP-204, Transcript of GSK3B interacting protein, humanhuman

TSL 5

Gene GSKIP, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-204ENST00000555088 KIF14Q15058 1648 aa19.51■□□□□ 0.71
GSKIP-204ENST00000555088 DIP2BQ9P265 1576 aa19.51■□□□□ 0.71
GSKIP-204ENST00000555088 NCOA2Q15596 1464 aa19.48■□□□□ 0.71
GSKIP-204ENST00000555088 ABCA9Q8IUA7 1624 aa19.47■□□□□ 0.71
GSKIP-204ENST00000555088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.47■□□□□ 0.71
GSKIP-204ENST00000555088 CD109Q6YHK3 1445 aa19.46■□□□□ 0.71
GSKIP-204ENST00000555088 KCNA4P22459 653 aa19.46■□□□□ 0.71
GSKIP-204ENST00000555088 CCNB3Q8WWL7 1395 aa19.45■□□□□ 0.7
GSKIP-204ENST00000555088 PLCH2O75038 1416 aa19.44■□□□□ 0.7
GSKIP-204ENST00000555088 TRHP20396 242 aaPredicted RBP19.44■□□□□ 0.7
GSKIP-204ENST00000555088 ARAP3Q8WWN8 1544 aa19.44■□□□□ 0.7
GSKIP-204ENST00000555088 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
GSKIP-204ENST00000555088 GPATCH8Q9UKJ3 1502 aaKnown RBP19.42■□□□□ 0.7
GSKIP-204ENST00000555088 TTC37Q6PGP7 1564 aa19.4■□□□□ 0.7
GSKIP-204ENST00000555088 PHLDB1Q86UU1 1377 aa19.4■□□□□ 0.7
GSKIP-204ENST00000555088 EFCAB2Q5VUJ9 269 aa19.39■□□□□ 0.69
GSKIP-204ENST00000555088 MYOM3Q5VTT5 1437 aa19.39■□□□□ 0.69
GSKIP-204ENST00000555088 MAP3K4Q9Y6R4 1608 aa19.39■□□□□ 0.69
GSKIP-204ENST00000555088 TEX14Q8IWB6 1497 aa19.38■□□□□ 0.69
GSKIP-204ENST00000555088 MIA2Q96PC5 1412 aa19.38■□□□□ 0.69
GSKIP-204ENST00000555088 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
GSKIP-204ENST00000555088 NEO1Q92859 1461 aa19.35■□□□□ 0.69
GSKIP-204ENST00000555088 PPARGC1BQ86YN6 1023 aaKnown RBP19.34■□□□□ 0.69
GSKIP-204ENST00000555088 FANCAO15360 1455 aa19.34■□□□□ 0.69
GSKIP-204ENST00000555088 ARHGAP5Q13017 1502 aa19.32■□□□□ 0.68
GSKIP-204ENST00000555088 PREX2Q70Z35 1606 aa19.32■□□□□ 0.68
GSKIP-204ENST00000555088 KIF13AQ9H1H9 1805 aa19.31■□□□□ 0.68
GSKIP-204ENST00000555088 FGD6Q6ZV73 1430 aa19.31■□□□□ 0.68
GSKIP-204ENST00000555088 PLEKHH2Q8IVE3 1493 aa19.3■□□□□ 0.68
GSKIP-204ENST00000555088 KIAA1107Q9UPP5 1409 aa19.29■□□□□ 0.68
GSKIP-204ENST00000555088 ITSN2Q9NZM3 1697 aa19.29■□□□□ 0.68
GSKIP-204ENST00000555088 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
GSKIP-204ENST00000555088 AKNAQ7Z591 1439 aa19.28■□□□□ 0.68
GSKIP-204ENST00000555088 CFAP74Q9C0B2 1584 aa19.27■□□□□ 0.68
GSKIP-204ENST00000555088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.27■□□□□ 0.68
GSKIP-204ENST00000555088 RRBP1Q9P2E9 1410 aaKnown RBP19.26■□□□□ 0.67
GSKIP-204ENST00000555088 TCOF1Q13428 1488 aaKnown RBP19.26■□□□□ 0.67
GSKIP-204ENST00000555088 RSPH4AQ5TD94 716 aa19.25■□□□□ 0.67
GSKIP-204ENST00000555088 CDC42BPAQ5VT25 1732 aa19.25■□□□□ 0.67
GSKIP-204ENST00000555088 ZNF777Q9ULD5 760 aaPredicted RBP19.24■□□□□ 0.67
GSKIP-204ENST00000555088 ADGRL1O94910 1474 aa19.23■□□□□ 0.67
GSKIP-204ENST00000555088 PPRC1Q5VV67 1664 aaKnown RBP19.23■□□□□ 0.67
GSKIP-204ENST00000555088 CAMSAP2Q08AD1 1489 aa19.22■□□□□ 0.67
GSKIP-204ENST00000555088 ZNF644Q9H582 1327 aaPredicted RBP19.22■□□□□ 0.67
GSKIP-204ENST00000555088 SCAPERQ9BY12 1400 aa19.21■□□□□ 0.67
GSKIP-204ENST00000555088 CDC42BPBQ9Y5S2 1711 aa19.21■□□□□ 0.67
GSKIP-204ENST00000555088 U3KPZ7 1027 aaPredicted RBP19.21■□□□□ 0.67
GSKIP-204ENST00000555088 ABCC1P33527 1531 aa19.2■□□□□ 0.66
GSKIP-204ENST00000555088 SAMD9LQ8IVG5 1584 aa19.2■□□□□ 0.66
GSKIP-204ENST00000555088 MBD5Q9P267 1494 aa19.2■□□□□ 0.66
GSKIP-204ENST00000555088 DENND4BO75064 1496 aaPredicted RBP19.19■□□□□ 0.66
GSKIP-204ENST00000555088 PTPN23Q9H3S7 1636 aa19.18■□□□□ 0.66
GSKIP-204ENST00000555088 POGZQ7Z3K3 1410 aa19.17■□□□□ 0.66
GSKIP-204ENST00000555088 ZNF518AQ6AHZ1 1483 aa19.16■□□□□ 0.66
GSKIP-204ENST00000555088 ARHGEF12Q9NZN5 1544 aa19.16■□□□□ 0.66
GSKIP-204ENST00000555088 FAM50AQ14320 339 aaKnown RBP19.16■□□□□ 0.66
GSKIP-204ENST00000555088 ARHGEF5Q12774 1597 aa19.15■□□□□ 0.66
GSKIP-204ENST00000555088 HNRNPMP52272 730 aaKnown RBP eCLIP19.15■□□□□ 0.668e-7■■■■□ 26.4
GSKIP-204ENST00000555088 SYCP2Q9BX26 1530 aa19.15■□□□□ 0.66
GSKIP-204ENST00000555088 CCDC141Q6ZP82 1450 aa19.14■□□□□ 0.65
GSKIP-204ENST00000555088 COL17A1Q9UMD9 1497 aaPredicted RBP19.14■□□□□ 0.65
GSKIP-204ENST00000555088 TRAPPC8Q9Y2L5 1435 aa19.13■□□□□ 0.65
GSKIP-204ENST00000555088 ABCC5O15440 1437 aa19.11■□□□□ 0.65
GSKIP-204ENST00000555088 AFAP1Q8N556 730 aa19.11■□□□□ 0.65
GSKIP-204ENST00000555088 SHANK2Q9UPX8 1470 aa19.1■□□□□ 0.65
GSKIP-204ENST00000555088 DAPK1P53355 1430 aa19.1■□□□□ 0.65
GSKIP-204ENST00000555088 RAPGEF3O95398 923 aa19.1■□□□□ 0.65
GSKIP-204ENST00000555088 TSPY4P0CV99 314 aa19.1■□□□□ 0.65
GSKIP-204ENST00000555088 TSPY10P0CW01 314 aa19.1■□□□□ 0.65
GSKIP-204ENST00000555088 MAGI2Q86UL8 1455 aa19.09■□□□□ 0.65
GSKIP-204ENST00000555088 RTEL1-TNFRSF6BF6WH68 1400 aa19.09■□□□□ 0.65
GSKIP-204ENST00000555088 KDM5CP41229 1560 aa19.09■□□□□ 0.65
GSKIP-204ENST00000555088 TSPOAP1O95153 1857 aa19.09■□□□□ 0.65
GSKIP-204ENST00000555088 MLH3Q9UHC1 1453 aa19.09■□□□□ 0.65
GSKIP-204ENST00000555088 SPAG9O60271 1321 aaKnown RBP19.08■□□□□ 0.65
GSKIP-204ENST00000555088 ZMYM4Q5VZL5 1548 aa19.08■□□□□ 0.64
GSKIP-204ENST00000555088 KDM6BO15054 1643 aa19.07■□□□□ 0.64
GSKIP-204ENST00000555088 DNMT1P26358 1616 aaKnown RBP19.06■□□□□ 0.64
GSKIP-204ENST00000555088 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
GSKIP-204ENST00000555088 FRMPD1Q5SYB0 1578 aa19.05■□□□□ 0.64
GSKIP-204ENST00000555088 ROCK1Q13464 1354 aa19.04■□□□□ 0.64
GSKIP-204ENST00000555088 MAST1Q9Y2H9 1570 aa19.03■□□□□ 0.64
GSKIP-204ENST00000555088 TRIM26Q12899 539 aaPredicted RBP19.03■□□□□ 0.64
GSKIP-204ENST00000555088 RICTORQ6R327 1708 aa19.01■□□□□ 0.63
GSKIP-204ENST00000555088 ANKRD30AQ9BXX3 1397 aa19.01■□□□□ 0.63
GSKIP-204ENST00000555088 ADGRL2O95490 1459 aa19.01■□□□□ 0.63
GSKIP-204ENST00000555088 PTPRKQ15262 1439 aa19■□□□□ 0.63
GSKIP-204ENST00000555088 ZFYVE16Q7Z3T8 1539 aa19■□□□□ 0.63
GSKIP-204ENST00000555088 HECW2Q9P2P5 1572 aa18.99■□□□□ 0.63
GSKIP-204ENST00000555088 ATP7AQ04656 1500 aa18.99■□□□□ 0.63
GSKIP-204ENST00000555088 NCOA1Q15788 1441 aa18.99■□□□□ 0.63
GSKIP-204ENST00000555088 INO80Q9ULG1 1556 aaPredicted RBP18.98■□□□□ 0.63
GSKIP-204ENST00000555088 ITGAEP38570 1179 aa18.97■□□□□ 0.63
GSKIP-204ENST00000555088 SPINK5Q9NQ38 1064 aaPredicted RBP18.97■□□□□ 0.63
GSKIP-204ENST00000555088 YEATS2Q9ULM3 1422 aa18.95■□□□□ 0.62
GSKIP-204ENST00000555088 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
GSKIP-204ENST00000555088 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
GSKIP-204ENST00000555088 CROCC2H7BZ55 1655 aa18.95■□□□□ 0.62
GSKIP-204ENST00000555088 PLXNC1O60486 1568 aa18.94■□□□□ 0.62
GSKIP-204ENST00000555088 CAPN15O75808 1086 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms