RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 KCNH8Q96L42 1107 aa21.18■□□□□ 0.98
XRCC3-211ENST00000555055 DAPK1P53355 1430 aa21.18■□□□□ 0.98
XRCC3-211ENST00000555055 ABCC5O15440 1437 aa21.18■□□□□ 0.98
XRCC3-211ENST00000555055 TROQ12816 1431 aaPredicted RBP21.18■□□□□ 0.98
XRCC3-211ENST00000555055 DENND4BO75064 1496 aaPredicted RBP21.17■□□□□ 0.98
XRCC3-211ENST00000555055 MPHOSPH9Q99550 1183 aa21.15■□□□□ 0.98
XRCC3-211ENST00000555055 PLEKHD1A6NEE1 506 aa21.13■□□□□ 0.97
XRCC3-211ENST00000555055 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
XRCC3-211ENST00000555055 ATP10BO94823 1461 aa21.11■□□□□ 0.97
XRCC3-211ENST00000555055 GCC2Q8IWJ2 1684 aa21.1■□□□□ 0.97
XRCC3-211ENST00000555055 CAMSAP2Q08AD1 1489 aa21.1■□□□□ 0.97
XRCC3-211ENST00000555055 CHD1O14646 1710 aa21.1■□□□□ 0.97
XRCC3-211ENST00000555055 PTPRGP23470 1445 aa21.09■□□□□ 0.97
XRCC3-211ENST00000555055 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
XRCC3-211ENST00000555055 DNMT1P26358 1616 aaKnown RBP21.06■□□□□ 0.96
XRCC3-211ENST00000555055 ABCA8O94911 1581 aa21.06■□□□□ 0.96
XRCC3-211ENST00000555055 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
XRCC3-211ENST00000555055 SLC4A1APQ9BWU0 796 aaKnown RBP21.05■□□□□ 0.96
XRCC3-211ENST00000555055 HNRNPMP52272 730 aaKnown RBP eCLIP21.03■□□□□ 0.965e-6■■■■□ 20.3
XRCC3-211ENST00000555055 AKNAQ7Z591 1439 aa21.02■□□□□ 0.96
XRCC3-211ENST00000555055 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
XRCC3-211ENST00000555055 KDM5BQ9UGL1 1544 aa21.01■□□□□ 0.95
XRCC3-211ENST00000555055 ROCK1Q13464 1354 aa20.99■□□□□ 0.95
XRCC3-211ENST00000555055 NCOA1Q15788 1441 aa20.97■□□□□ 0.95
XRCC3-211ENST00000555055 CDC42BPAQ5VT25 1732 aa20.95■□□□□ 0.94
XRCC3-211ENST00000555055 ITSN2Q9NZM3 1697 aa20.95■□□□□ 0.94
XRCC3-211ENST00000555055 ABCC10Q5T3U5 1492 aa20.95■□□□□ 0.94
XRCC3-211ENST00000555055 ADCY10Q96PN6 1610 aa20.94■□□□□ 0.94
XRCC3-211ENST00000555055 SUPT16HQ9Y5B9 1047 aaKnown RBP20.93■□□□□ 0.94
XRCC3-211ENST00000555055 ANKRD30BQ9BXX2 1392 aa20.92■□□□□ 0.94
XRCC3-211ENST00000555055 HSPA5P11021 654 aaKnown RBP20.92■□□□□ 0.94
XRCC3-211ENST00000555055 NBPF8Q3BBV2 869 aa20.91■□□□□ 0.94
XRCC3-211ENST00000555055 ZNF326Q5BKZ1 582 aaKnown RBP20.9■□□□□ 0.94
XRCC3-211ENST00000555055 PKD2Q13563 968 aa20.9■□□□□ 0.94
XRCC3-211ENST00000555055 PZPP20742 1482 aa20.88■□□□□ 0.93
XRCC3-211ENST00000555055 ANKRD30AQ9BXX3 1397 aa20.88■□□□□ 0.93
XRCC3-211ENST00000555055 TSPY4P0CV99 314 aa20.88■□□□□ 0.93
XRCC3-211ENST00000555055 TSPY10P0CW01 314 aa20.88■□□□□ 0.93
XRCC3-211ENST00000555055 C9orf84Q5VXU9 1444 aa20.87■□□□□ 0.93
XRCC3-211ENST00000555055 ANKRD50Q9ULJ7 1429 aa20.87■□□□□ 0.93
XRCC3-211ENST00000555055 CROCC2H7BZ55 1655 aa20.84■□□□□ 0.93
XRCC3-211ENST00000555055 NUP155O75694 1391 aa20.83■□□□□ 0.93
XRCC3-211ENST00000555055 C11orf95C9JLR9 678 aaPredicted RBP20.82■□□□□ 0.92
XRCC3-211ENST00000555055 ADGBQ8N7X0 1667 aa20.82■□□□□ 0.92
XRCC3-211ENST00000555055 RPRD2Q5VT52 1461 aaKnown RBP20.82■□□□□ 0.92
XRCC3-211ENST00000555055 WASHC2AQ641Q2 1341 aa20.82■□□□□ 0.92
XRCC3-211ENST00000555055 SHROOM2Q13796 1616 aa20.81■□□□□ 0.92
XRCC3-211ENST00000555055 ANP32CO43423 234 aa20.81■□□□□ 0.92
XRCC3-211ENST00000555055 KIF15Q9NS87 1388 aa20.8■□□□□ 0.92
XRCC3-211ENST00000555055 TTC37Q6PGP7 1564 aa20.8■□□□□ 0.92
XRCC3-211ENST00000555055 ADGRL2O95490 1459 aa20.8■□□□□ 0.92
XRCC3-211ENST00000555055 EIF4G2P78344 907 aaKnown RBP eCLIP20.8■□□□□ 0.92
XRCC3-211ENST00000555055 CDC42BPBQ9Y5S2 1711 aa20.79■□□□□ 0.92
XRCC3-211ENST00000555055 SAMD9LQ8IVG5 1584 aa20.79■□□□□ 0.92
XRCC3-211ENST00000555055 MBD5Q9P267 1494 aa20.78■□□□□ 0.92
XRCC3-211ENST00000555055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.78■□□□□ 0.92
XRCC3-211ENST00000555055 TEX14Q8IWB6 1497 aa20.78■□□□□ 0.92
XRCC3-211ENST00000555055 ARHGAP5Q13017 1502 aa20.77■□□□□ 0.92
XRCC3-211ENST00000555055 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.91
XRCC3-211ENST00000555055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.76■□□□□ 0.912e-6■■■■■ 51.7
XRCC3-211ENST00000555055 SYCP2Q9BX26 1530 aa20.76■□□□□ 0.91
XRCC3-211ENST00000555055 ABCC2Q92887 1545 aa20.75■□□□□ 0.91
XRCC3-211ENST00000555055 KIAA1107Q9UPP5 1409 aa20.75■□□□□ 0.91
XRCC3-211ENST00000555055 KDM2AQ9Y2K7 1162 aa20.74■□□□□ 0.91
XRCC3-211ENST00000555055 TSHZ2Q9NRE2 1034 aa20.74■□□□□ 0.91
XRCC3-211ENST00000555055 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
XRCC3-211ENST00000555055 PREX2Q70Z35 1606 aa20.71■□□□□ 0.91
XRCC3-211ENST00000555055 CCDC141Q6ZP82 1450 aa20.7■□□□□ 0.9
XRCC3-211ENST00000555055 CLASP1Q7Z460 1538 aa20.7■□□□□ 0.9
XRCC3-211ENST00000555055 SHANK2Q9UPX8 1470 aa20.69■□□□□ 0.9
XRCC3-211ENST00000555055 ANP32EQ9BTT0 268 aa20.68■□□□□ 0.9
XRCC3-211ENST00000555055 ARHGEF12Q9NZN5 1544 aa20.66■□□□□ 0.9
XRCC3-211ENST00000555055 ZCCHC11Q5TAX3 1644 aaKnown RBP20.66■□□□□ 0.9
XRCC3-211ENST00000555055 RGL3Q3MIN7 710 aa20.64■□□□□ 0.9
XRCC3-211ENST00000555055 ARHGEF5Q12774 1597 aa20.63■□□□□ 0.89
XRCC3-211ENST00000555055 CCDC184Q52MB2 194 aa20.63■□□□□ 0.89
XRCC3-211ENST00000555055 AFAP1Q8N556 730 aa20.62■□□□□ 0.89
XRCC3-211ENST00000555055 DCAF11Q8TEB1 546 aa20.62■□□□□ 0.89
XRCC3-211ENST00000555055 KIF7Q2M1P5 1343 aa20.61■□□□□ 0.89
XRCC3-211ENST00000555055 CCDC7Q96M83 1385 aa20.61■□□□□ 0.89
XRCC3-211ENST00000555055 PLEKHH2Q8IVE3 1493 aa20.6■□□□□ 0.89
XRCC3-211ENST00000555055 MYO5CQ9NQX4 1742 aa20.6■□□□□ 0.89
XRCC3-211ENST00000555055 CCER2I3L3R5 266 aa20.59■□□□□ 0.89
XRCC3-211ENST00000555055 TRAPPC8Q9Y2L5 1435 aa20.58■□□□□ 0.88
XRCC3-211ENST00000555055 EFCAB2Q5VUJ9 269 aa20.57■□□□□ 0.88
XRCC3-211ENST00000555055 FAM135AQ9P2D6 1515 aa20.57■□□□□ 0.88
XRCC3-211ENST00000555055 SPATA31E1Q6ZUB1 1445 aa20.57■□□□□ 0.88
XRCC3-211ENST00000555055 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
XRCC3-211ENST00000555055 USP47Q96K76 1375 aa20.56■□□□□ 0.88
XRCC3-211ENST00000555055 PLCH2O75038 1416 aa20.56■□□□□ 0.88
XRCC3-211ENST00000555055 MYT1LQ9UL68 1186 aa20.55■□□□□ 0.88
XRCC3-211ENST00000555055 BCANQ96GW7 911 aa20.54■□□□□ 0.88
XRCC3-211ENST00000555055 CARD11Q9BXL7 1154 aa20.54■□□□□ 0.88
XRCC3-211ENST00000555055 CNTLNQ9NXG0 1405 aa20.53■□□□□ 0.88
XRCC3-211ENST00000555055 KDM5DQ9BY66 1539 aa20.5■□□□□ 0.87
XRCC3-211ENST00000555055 SENP3-EIF4A1A0A087X0R7 540 aa20.5■□□□□ 0.87
XRCC3-211ENST00000555055 HNRNPUQ00839 825 aaKnown RBP eCLIP20.5■□□□□ 0.87
XRCC3-211ENST00000555055 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
XRCC3-211ENST00000555055 ST20-MTHFSA0A0A6YYL1 179 aa20.48■□□□□ 0.87
XRCC3-211ENST00000555055 FAM9BQ8IZU0 186 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms