RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PLSCR2Q9NRY7 297 aa10.27□□□□□ -0.77
SCFD1-214ENST00000554819 SLC24A1O60721 1099 aa10.25□□□□□ -0.77
SCFD1-214ENST00000554819 TMC2Q8TDI7 906 aa10.25□□□□□ -0.77
SCFD1-214ENST00000554819 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
SCFD1-214ENST00000554819 VSIG10Q8N0Z9 540 aa10.24□□□□□ -0.77
SCFD1-214ENST00000554819 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-214ENST00000554819 CRISPLD2Q9H0B8 497 aa10.21□□□□□ -0.77
SCFD1-214ENST00000554819 LARP6Q9BRS8 491 aaKnown RBP10.2□□□□□ -0.78
SCFD1-214ENST00000554819 NCKAP5LQ9HCH0 1330 aa10.2□□□□□ -0.78
SCFD1-214ENST00000554819 WDR70Q9NW82 654 aa10.2□□□□□ -0.78
SCFD1-214ENST00000554819 C2orf72A6NCS6 295 aa10.18□□□□□ -0.78
SCFD1-214ENST00000554819 KIF3CO14782 793 aa10.18□□□□□ -0.78
SCFD1-214ENST00000554819 TMEM92Q6UXU6 159 aa10.18□□□□□ -0.78
SCFD1-214ENST00000554819 SLAIN1Q8ND83 568 aa10.18□□□□□ -0.78
SCFD1-214ENST00000554819 OTUD5Q96G74 571 aa10.18□□□□□ -0.78
SCFD1-214ENST00000554819 DDX27Q96GQ7 796 aaKnown RBP10.17□□□□□ -0.78
SCFD1-214ENST00000554819 FOXK1P85037 733 aa10.16□□□□□ -0.78
SCFD1-214ENST00000554819 MFSD10Q14728 455 aa10.16□□□□□ -0.78
SCFD1-214ENST00000554819 PPP1R15BQ5SWA1 713 aa10.13□□□□□ -0.79
SCFD1-214ENST00000554819 KDM2AQ9Y2K7 1162 aa10.13□□□□□ -0.79
SCFD1-214ENST00000554819 DSG2Q14126 1118 aa10.12□□□□□ -0.79
SCFD1-214ENST00000554819 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
SCFD1-214ENST00000554819 SNPHO15079 494 aa10.09□□□□□ -0.79
SCFD1-214ENST00000554819 E2F4Q16254 413 aa10.07□□□□□ -0.8
SCFD1-214ENST00000554819 DOK7Q18PE1 504 aa10.05□□□□□ -0.8
SCFD1-214ENST00000554819 P3H3Q8IVL6 736 aa10.05□□□□□ -0.8
SCFD1-214ENST00000554819 CAMK2BQ13554 666 aa10.04□□□□□ -0.8
SCFD1-214ENST00000554819 SLC34A2O95436 690 aa10.03□□□□□ -0.8
SCFD1-214ENST00000554819 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
SCFD1-214ENST00000554819 TBC1D12O60347 775 aa10.01□□□□□ -0.81
SCFD1-214ENST00000554819 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
SCFD1-214ENST00000554819 HOXB3P14651 431 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-214ENST00000554819 PTCD2Q8WV60 388 aaKnown RBP9.99□□□□□ -0.81
SCFD1-214ENST00000554819 ZSWIM6Q9HCJ5 1215 aa9.99□□□□□ -0.81
SCFD1-214ENST00000554819 ARHGEF1Q92888 912 aaKnown RBP9.98□□□□□ -0.81
SCFD1-214ENST00000554819 POTEMA6NI47 508 aa9.97□□□□□ -0.81
SCFD1-214ENST00000554819 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
SCFD1-214ENST00000554819 KCNV2Q8TDN2 545 aa9.97□□□□□ -0.81
SCFD1-214ENST00000554819 EMILIN3Q9NT22 766 aa9.97□□□□□ -0.81
SCFD1-214ENST00000554819 OXER1Q8TDS5 423 aa9.96□□□□□ -0.82
SCFD1-214ENST00000554819 ARIH1Q9Y4X5 557 aaPredicted RBP9.96□□□□□ -0.82
SCFD1-214ENST00000554819 UPF1Q92900 1129 aaKnown RBP eCLIP9.95□□□□□ -0.82
SCFD1-214ENST00000554819 PCDHGA4Q9Y5G9 962 aa9.95□□□□□ -0.82
SCFD1-214ENST00000554819 DPYSL4O14531 572 aa9.92□□□□□ -0.82
SCFD1-214ENST00000554819 POTEGQ6S5H5 508 aa9.92□□□□□ -0.82
SCFD1-214ENST00000554819 ZNF316A6NFI3 1004 aaPredicted RBP9.91□□□□□ -0.82
SCFD1-214ENST00000554819 GPR153Q6NV75 609 aa9.91□□□□□ -0.82
SCFD1-214ENST00000554819 SPDYE16A6NNV3 312 aaPredicted RBP9.9□□□□□ -0.82
SCFD1-214ENST00000554819 ARSIQ5FYB1 569 aa9.9□□□□□ -0.82
SCFD1-214ENST00000554819 FAM163AQ96GL9 167 aaPredicted RBP9.9□□□□□ -0.82
SCFD1-214ENST00000554819 HOXB1P14653 301 aaPredicted RBP9.89□□□□□ -0.83
SCFD1-214ENST00000554819 ST18O60284 1047 aa9.87□□□□□ -0.83
SCFD1-214ENST00000554819 EVI5O60447 810 aa9.87□□□□□ -0.83
SCFD1-214ENST00000554819 PDIA6Q15084 440 aa9.87□□□□□ -0.83
SCFD1-214ENST00000554819 NUDT7P0C024 238 aa9.85□□□□□ -0.83
SCFD1-214ENST00000554819 NBR1Q14596 966 aa9.85□□□□□ -0.83
SCFD1-214ENST00000554819 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
SCFD1-214ENST00000554819 KHSRPQ92945 711 aaKnown RBP eCLIP9.84□□□□□ -0.834e-8■■■□□ 15.7
SCFD1-214ENST00000554819 KDM4FA0A1W2PPD8 638 aa9.83□□□□□ -0.84
SCFD1-214ENST00000554819 PTGER2P43116 358 aa9.81□□□□□ -0.84
SCFD1-214ENST00000554819 BCANQ96GW7 911 aa9.81□□□□□ -0.84
SCFD1-214ENST00000554819 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
SCFD1-214ENST00000554819 EMP3P54852 163 aa9.79□□□□□ -0.84
SCFD1-214ENST00000554819 SEMA3EO15041 775 aa9.78□□□□□ -0.84
SCFD1-214ENST00000554819 SMYD5Q6GMV2 418 aa9.78□□□□□ -0.84
SCFD1-214ENST00000554819 PCDH10Q9P2E7 1040 aa9.78□□□□□ -0.84
SCFD1-214ENST00000554819 LHX6Q9UPM6 363 aa9.78□□□□□ -0.84
SCFD1-214ENST00000554819 ERBB3P21860 1342 aa9.77□□□□□ -0.85
SCFD1-214ENST00000554819 TULP1O00294 542 aaPredicted RBP9.76□□□□□ -0.85
SCFD1-214ENST00000554819 LCE2DQ5TA82 110 aaPredicted RBP9.76□□□□□ -0.85
SCFD1-214ENST00000554819 MARVELD3Q96A59 401 aa9.76□□□□□ -0.85
SCFD1-214ENST00000554819 PHF14O94880 888 aa9.75□□□□□ -0.85
SCFD1-214ENST00000554819 DDX12PQ92771 950 aa9.75□□□□□ -0.85
SCFD1-214ENST00000554819 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
SCFD1-214ENST00000554819 TESPA1A2RU30 521 aaPredicted RBP9.74□□□□□ -0.85
SCFD1-214ENST00000554819 GRXCR2A6NFK2 248 aa9.74□□□□□ -0.85
SCFD1-214ENST00000554819 EPAS1Q99814 870 aa9.74□□□□□ -0.85
SCFD1-214ENST00000554819 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
SCFD1-214ENST00000554819 ZNF454Q8N9F8 522 aa9.73□□□□□ -0.85
SCFD1-214ENST00000554819 FAM205CA6NFA0 338 aa9.72□□□□□ -0.85
SCFD1-214ENST00000554819 MLLT3P42568 568 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-214ENST00000554819 FOSBP53539 338 aa9.72□□□□□ -0.85
SCFD1-214ENST00000554819 FBXW7Q969H0 707 aa9.72□□□□□ -0.85
SCFD1-214ENST00000554819 VARS2Q5ST30 1063 aaKnown RBP9.71□□□□□ -0.86
SCFD1-214ENST00000554819 TYW1BQ6NUM6 668 aa9.71□□□□□ -0.86
SCFD1-214ENST00000554819 PCDHGA10Q9Y5H3 936 aa9.71□□□□□ -0.86
SCFD1-214ENST00000554819 ZDHHC16Q969W1 377 aa9.7□□□□□ -0.86
SCFD1-214ENST00000554819 HS3ST6Q96QI5 342 aa9.69□□□□□ -0.86
SCFD1-214ENST00000554819 OSBPP22059 807 aa9.67□□□□□ -0.86
SCFD1-214ENST00000554819 ZNF687Q8N1G0 1237 aa9.66□□□□□ -0.86
SCFD1-214ENST00000554819 EN1Q05925 392 aaPredicted RBP9.65□□□□□ -0.86
SCFD1-214ENST00000554819 KCNH8Q96L42 1107 aa9.65□□□□□ -0.86
SCFD1-214ENST00000554819 BCL2L12Q9HB09 334 aa9.64□□□□□ -0.87
SCFD1-214ENST00000554819 MAP3K7O43318 606 aa9.63□□□□□ -0.87
SCFD1-214ENST00000554819 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.63□□□□□ -0.87
SCFD1-214ENST00000554819 RBM33Q96EV2 1170 aaKnown RBP9.63□□□□□ -0.87
SCFD1-214ENST00000554819 PTPREP23469 700 aa9.62□□□□□ -0.87
SCFD1-214ENST00000554819 ADAM33Q9BZ11 813 aa9.62□□□□□ -0.87
SCFD1-214ENST00000554819 POTEB3A0JP26 581 aa9.61□□□□□ -0.87
SCFD1-214ENST00000554819 PBX2P40425 430 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms