RNA–Protein interactions for RNA: ENST00000554482.1

NPC2-205, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-205ENST00000554482 POGZQ7Z3K3 1410 aa18.41■□□□□ 0.54
NPC2-205ENST00000554482 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
NPC2-205ENST00000554482 KIF14Q15058 1648 aa18.41■□□□□ 0.54
NPC2-205ENST00000554482 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
NPC2-205ENST00000554482 PCF11O94913 1555 aaKnown RBP18.4■□□□□ 0.54
NPC2-205ENST00000554482 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
NPC2-205ENST00000554482 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.53
NPC2-205ENST00000554482 SIGLEC1Q9BZZ2 1709 aa18.38■□□□□ 0.53
NPC2-205ENST00000554482 CLIP1P30622 1438 aa18.36■□□□□ 0.53
NPC2-205ENST00000554482 MLECQ14165 292 aa18.36■□□□□ 0.53
NPC2-205ENST00000554482 LMTK3Q96Q04 1460 aa18.36■□□□□ 0.53
NPC2-205ENST00000554482 ARHGAP5Q13017 1502 aa18.35■□□□□ 0.53
NPC2-205ENST00000554482 TROQ12816 1431 aaPredicted RBP18.35■□□□□ 0.53
NPC2-205ENST00000554482 EFCAB2Q5VUJ9 269 aa18.35■□□□□ 0.53
NPC2-205ENST00000554482 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
NPC2-205ENST00000554482 FER1L4A9Z1Z3 1794 aa18.34■□□□□ 0.53
NPC2-205ENST00000554482 C9orf84Q5VXU9 1444 aa18.31■□□□□ 0.52
NPC2-205ENST00000554482 MYT1LQ9UL68 1186 aa18.3■□□□□ 0.52
NPC2-205ENST00000554482 ATP10AO60312 1499 aa18.3■□□□□ 0.52
NPC2-205ENST00000554482 ZNF518AQ6AHZ1 1483 aa18.3■□□□□ 0.52
NPC2-205ENST00000554482 CCDC18Q5T9S5 1454 aa18.27■□□□□ 0.52
NPC2-205ENST00000554482 HSPA2P54652 639 aa18.27■□□□□ 0.52
NPC2-205ENST00000554482 CASKIN1Q8WXD9 1431 aa18.26■□□□□ 0.51
NPC2-205ENST00000554482 KDM5CP41229 1560 aa18.25■□□□□ 0.51
NPC2-205ENST00000554482 ARHGEF12Q9NZN5 1544 aa18.25■□□□□ 0.51
NPC2-205ENST00000554482 PREX2Q70Z35 1606 aa18.25■□□□□ 0.51
NPC2-205ENST00000554482 CDC42BPBQ9Y5S2 1711 aa18.25■□□□□ 0.51
NPC2-205ENST00000554482 AFAP1Q8N556 730 aa18.24■□□□□ 0.51
NPC2-205ENST00000554482 FBXO41Q8TF61 875 aa18.24■□□□□ 0.51
NPC2-205ENST00000554482 DIP2CQ9Y2E4 1556 aa18.22■□□□□ 0.51
NPC2-205ENST00000554482 ABCC1P33527 1531 aa18.21■□□□□ 0.51
NPC2-205ENST00000554482 FYCO1Q9BQS8 1478 aa18.2■□□□□ 0.5
NPC2-205ENST00000554482 ABCA6Q8N139 1617 aa18.2■□□□□ 0.5
NPC2-205ENST00000554482 ITSN2Q9NZM3 1697 aa18.2■□□□□ 0.5
NPC2-205ENST00000554482 PREX1Q8TCU6 1659 aa18.18■□□□□ 0.5
NPC2-205ENST00000554482 CDC42BPAQ5VT25 1732 aa18.18■□□□□ 0.5
NPC2-205ENST00000554482 TRAPPC8Q9Y2L5 1435 aa18.17■□□□□ 0.5
NPC2-205ENST00000554482 CEBPAP49715 358 aaPredicted RBP18.17■□□□□ 0.5
NPC2-205ENST00000554482 MLH3Q9UHC1 1453 aa18.16■□□□□ 0.5
NPC2-205ENST00000554482 REREQ9P2R6 1566 aa18.16■□□□□ 0.5
NPC2-205ENST00000554482 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
NPC2-205ENST00000554482 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
NPC2-205ENST00000554482 UHRF1BP1Q6BDS2 1440 aa18.11■□□□□ 0.49
NPC2-205ENST00000554482 SYCP2Q9BX26 1530 aa18.11■□□□□ 0.49
NPC2-205ENST00000554482 SAMD9LQ8IVG5 1584 aa18.11■□□□□ 0.49
NPC2-205ENST00000554482 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
NPC2-205ENST00000554482 C3P01024 1663 aa18.09■□□□□ 0.49
NPC2-205ENST00000554482 AGLP35573 1532 aa18.09■□□□□ 0.49
NPC2-205ENST00000554482 GPATCH8Q9UKJ3 1502 aaKnown RBP18.08■□□□□ 0.48
NPC2-205ENST00000554482 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
NPC2-205ENST00000554482 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
NPC2-205ENST00000554482 SPAG9O60271 1321 aaKnown RBP18.04■□□□□ 0.48
NPC2-205ENST00000554482 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.48
NPC2-205ENST00000554482 CERKQ8TCT0 537 aa18.04■□□□□ 0.48
NPC2-205ENST00000554482 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
NPC2-205ENST00000554482 SUPT6HQ7KZ85 1726 aaKnown RBP18.03■□□□□ 0.48
NPC2-205ENST00000554482 ATP7AQ04656 1500 aa18.03■□□□□ 0.48
NPC2-205ENST00000554482 STRCQ7RTU9 1775 aa18.02■□□□□ 0.48
NPC2-205ENST00000554482 CNTLNQ9NXG0 1405 aa18.02■□□□□ 0.48
NPC2-205ENST00000554482 SETD1BQ9UPS6 1966 aaKnown RBP18.02■□□□□ 0.47
NPC2-205ENST00000554482 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
NPC2-205ENST00000554482 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
NPC2-205ENST00000554482 INO80Q9ULG1 1556 aaPredicted RBP18■□□□□ 0.47
NPC2-205ENST00000554482 EHBP1L1Q8N3D4 1523 aa17.99■□□□□ 0.47
NPC2-205ENST00000554482 FOXD1Q16676 465 aa17.99■□□□□ 0.47
NPC2-205ENST00000554482 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
NPC2-205ENST00000554482 MROH2AA6NES4 1674 aa17.97■□□□□ 0.47
NPC2-205ENST00000554482 TIAM1Q13009 1591 aa17.97■□□□□ 0.47
NPC2-205ENST00000554482 A2MP01023 1474 aa17.96■□□□□ 0.47
NPC2-205ENST00000554482 PLXNC1O60486 1568 aa17.96■□□□□ 0.46
NPC2-205ENST00000554482 CLTCQ00610 1675 aaKnown RBP17.95■□□□□ 0.46
NPC2-205ENST00000554482 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
NPC2-205ENST00000554482 ZNF644Q9H582 1327 aaPredicted RBP17.93■□□□□ 0.46
NPC2-205ENST00000554482 ADGBQ8N7X0 1667 aa17.93■□□□□ 0.46
NPC2-205ENST00000554482 ZMYM3Q14202 1370 aa17.92■□□□□ 0.46
NPC2-205ENST00000554482 PTPRTO14522 1441 aa17.92■□□□□ 0.46
NPC2-205ENST00000554482 NPATQ14207 1427 aa17.92■□□□□ 0.46
NPC2-205ENST00000554482 GGT6Q6P531 493 aa17.91■□□□□ 0.46
NPC2-205ENST00000554482 NCOA1Q15788 1441 aa17.9■□□□□ 0.46
NPC2-205ENST00000554482 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
NPC2-205ENST00000554482 MYO3AQ8NEV4 1616 aa17.89■□□□□ 0.45
NPC2-205ENST00000554482 MBD5Q9P267 1494 aa17.87■□□□□ 0.45
NPC2-205ENST00000554482 NCOA2Q15596 1464 aa17.86■□□□□ 0.45
NPC2-205ENST00000554482 ZNF142P52746 1687 aaPredicted RBP17.85■□□□□ 0.45
NPC2-205ENST00000554482 CEP170BQ9Y4F5 1589 aaPredicted RBP17.85■□□□□ 0.45
NPC2-205ENST00000554482 CAMSAP2Q08AD1 1489 aa17.84■□□□□ 0.45
NPC2-205ENST00000554482 CCDC141Q6ZP82 1450 aa17.84■□□□□ 0.45
NPC2-205ENST00000554482 PTPRKQ15262 1439 aa17.84■□□□□ 0.45
NPC2-205ENST00000554482 RTEL1-TNFRSF6BF6WH68 1400 aa17.83■□□□□ 0.45
NPC2-205ENST00000554482 LTBP4Q8N2S1 1624 aa17.83■□□□□ 0.44
NPC2-205ENST00000554482 NCKAP5LQ9HCH0 1330 aa17.81■□□□□ 0.44
NPC2-205ENST00000554482 DHX29Q7Z478 1369 aaKnown RBP17.8■□□□□ 0.44
NPC2-205ENST00000554482 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
NPC2-205ENST00000554482 PLA2R1Q13018 1463 aa17.79■□□□□ 0.44
NPC2-205ENST00000554482 KIF3BO15066 747 aa17.78■□□□□ 0.44
NPC2-205ENST00000554482 KDM5DQ9BY66 1539 aa17.77■□□□□ 0.43
NPC2-205ENST00000554482 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
NPC2-205ENST00000554482 PKD2Q13563 968 aa17.76■□□□□ 0.43
NPC2-205ENST00000554482 A2ML1A8K2U0 1454 aa17.75■□□□□ 0.43
NPC2-205ENST00000554482 TCOF1Q13428 1488 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms