RNA–Protein interactions for RNA: ENST00000554482.1

NPC2-205, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-205ENST00000554482 NISCHQ9Y2I1 1504 aa28.01■■■□□ 2.07
NPC2-205ENST00000554482 ABCC9O60706 1549 aa25.25■■□□□ 1.63
NPC2-205ENST00000554482 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
NPC2-205ENST00000554482 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
NPC2-205ENST00000554482 NACADO15069 1562 aa23.79■■□□□ 1.4
NPC2-205ENST00000554482 DCAF8L2P0C7V8 631 aa23.73■■□□□ 1.39
NPC2-205ENST00000554482 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
NPC2-205ENST00000554482 PABPN1Q86U42 306 aaKnown RBP eCLIP23.48■■□□□ 1.35
NPC2-205ENST00000554482 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
NPC2-205ENST00000554482 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
NPC2-205ENST00000554482 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
NPC2-205ENST00000554482 ZCCHC6Q5VYS8 1495 aaKnown RBP23.22■■□□□ 1.31
NPC2-205ENST00000554482 DCAF1Q9Y4B6 1507 aa23.1■■□□□ 1.29
NPC2-205ENST00000554482 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
NPC2-205ENST00000554482 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
NPC2-205ENST00000554482 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
NPC2-205ENST00000554482 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
NPC2-205ENST00000554482 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
NPC2-205ENST00000554482 EIF4G1Q04637 1599 aaKnown RBP22.73■■□□□ 1.23
NPC2-205ENST00000554482 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
NPC2-205ENST00000554482 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
NPC2-205ENST00000554482 SMARCA4P51532 1647 aa21.89■■□□□ 1.09
NPC2-205ENST00000554482 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
NPC2-205ENST00000554482 SMARCA2P51531 1590 aa21.86■■□□□ 1.09
NPC2-205ENST00000554482 ERCC6Q03468 1493 aa21.83■■□□□ 1.09
NPC2-205ENST00000554482 HMGXB3Q12766 1538 aa21.81■■□□□ 1.08
NPC2-205ENST00000554482 BAZ1AQ9NRL2 1556 aaPredicted RBP21.77■■□□□ 1.08
NPC2-205ENST00000554482 CUX2O14529 1486 aa21.75■■□□□ 1.07
NPC2-205ENST00000554482 DNAJC5Q9H3Z4 198 aa21.73■■□□□ 1.07
NPC2-205ENST00000554482 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
NPC2-205ENST00000554482 NESP48681 1621 aa21.66■■□□□ 1.06
NPC2-205ENST00000554482 PEG3Q9GZU2 1588 aa21.63■■□□□ 1.05
NPC2-205ENST00000554482 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
NPC2-205ENST00000554482 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
NPC2-205ENST00000554482 THOC2Q8NI27 1593 aaKnown RBP21.46■■□□□ 1.03
NPC2-205ENST00000554482 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
NPC2-205ENST00000554482 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
NPC2-205ENST00000554482 WIZO95785 1651 aa21.36■■□□□ 1.01
NPC2-205ENST00000554482 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
NPC2-205ENST00000554482 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
NPC2-205ENST00000554482 WDR62O43379 1518 aa21.14■□□□□ 0.98
NPC2-205ENST00000554482 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
NPC2-205ENST00000554482 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
NPC2-205ENST00000554482 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.97
NPC2-205ENST00000554482 TOP2AP11388 1531 aaKnown RBP21.08■□□□□ 0.96
NPC2-205ENST00000554482 CFTRP13569 1480 aa21.03■□□□□ 0.96
NPC2-205ENST00000554482 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
NPC2-205ENST00000554482 PRDM2Q13029 1718 aa20.88■□□□□ 0.93
NPC2-205ENST00000554482 TRIM41Q8WV44 630 aa20.87■□□□□ 0.93
NPC2-205ENST00000554482 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
NPC2-205ENST00000554482 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
NPC2-205ENST00000554482 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
NPC2-205ENST00000554482 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
NPC2-205ENST00000554482 ZNF608Q9ULD9 1512 aaPredicted RBP20.66■□□□□ 0.9
NPC2-205ENST00000554482 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
NPC2-205ENST00000554482 DNMBPQ6XZF7 1577 aa20.6■□□□□ 0.89
NPC2-205ENST00000554482 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.88
NPC2-205ENST00000554482 RIMBP3CA6NJZ7 1639 aa20.51■□□□□ 0.87
NPC2-205ENST00000554482 RIMBP3BA6NNM3 1639 aa20.51■□□□□ 0.87
NPC2-205ENST00000554482 RIMBP3Q9UFD9 1639 aa20.51■□□□□ 0.87
NPC2-205ENST00000554482 TARBP1Q13395 1621 aaKnown RBP20.48■□□□□ 0.87
NPC2-205ENST00000554482 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.87
NPC2-205ENST00000554482 POLA1P09884 1462 aaPredicted RBP20.46■□□□□ 0.87
NPC2-205ENST00000554482 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
NPC2-205ENST00000554482 CHD1O14646 1710 aa20.43■□□□□ 0.86
NPC2-205ENST00000554482 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
NPC2-205ENST00000554482 FBLN2P98095 1184 aa20.39■□□□□ 0.85
NPC2-205ENST00000554482 SOGA1O94964 1423 aa20.36■□□□□ 0.85
NPC2-205ENST00000554482 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
NPC2-205ENST00000554482 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
NPC2-205ENST00000554482 CUX1P39880 1505 aa20.31■□□□□ 0.84
NPC2-205ENST00000554482 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
NPC2-205ENST00000554482 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
NPC2-205ENST00000554482 WDR97A6NE52 1622 aa20.27■□□□□ 0.83
NPC2-205ENST00000554482 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
NPC2-205ENST00000554482 ARAP1Q96P48 1450 aa20.22■□□□□ 0.83
NPC2-205ENST00000554482 GRIN2BQ13224 1484 aa20.19■□□□□ 0.82
NPC2-205ENST00000554482 MAGI1Q96QZ7 1491 aaPredicted RBP20.19■□□□□ 0.82
NPC2-205ENST00000554482 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
NPC2-205ENST00000554482 SYNJ1O43426 1573 aa20.17■□□□□ 0.82
NPC2-205ENST00000554482 CLASP1Q7Z460 1538 aa20.16■□□□□ 0.82
NPC2-205ENST00000554482 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
NPC2-205ENST00000554482 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
NPC2-205ENST00000554482 GAPVD1Q14C86 1478 aa20.12■□□□□ 0.81
NPC2-205ENST00000554482 TRHP20396 242 aaPredicted RBP20.11■□□□□ 0.81
NPC2-205ENST00000554482 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
NPC2-205ENST00000554482 ABCA5Q8WWZ7 1642 aa20.07■□□□□ 0.8
NPC2-205ENST00000554482 WRNQ14191 1432 aaPredicted RBP eCLIP20■□□□□ 0.79
NPC2-205ENST00000554482 TOP2BQ02880 1626 aa19.97■□□□□ 0.79
NPC2-205ENST00000554482 BIVM-ERCC5R4GMW8 1640 aa19.97■□□□□ 0.79
NPC2-205ENST00000554482 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
NPC2-205ENST00000554482 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
NPC2-205ENST00000554482 CEP170Q5SW79 1584 aa19.88■□□□□ 0.77
NPC2-205ENST00000554482 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
NPC2-205ENST00000554482 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
NPC2-205ENST00000554482 NUP160Q12769 1436 aa19.85■□□□□ 0.77
NPC2-205ENST00000554482 ERICH3Q5RHP9 1530 aa19.83■□□□□ 0.77
NPC2-205ENST00000554482 SHROOM2Q13796 1616 aa19.77■□□□□ 0.76
NPC2-205ENST00000554482 PRG4Q92954 1404 aaPredicted RBP19.69■□□□□ 0.74
NPC2-205ENST00000554482 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms