RNA–Protein interactions for RNA: ENST00000554034.5

CDH24-205, Transcript of cadherin 24, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH24, Length 2,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-205ENST00000554034 ZNF644Q9H582 1327 aaPredicted RBP26.04■■□□□ 1.76
CDH24-205ENST00000554034 TCOF1Q13428 1488 aaKnown RBP26.04■■□□□ 1.76
CDH24-205ENST00000554034 GCC2Q8IWJ2 1684 aa26.03■■□□□ 1.76
CDH24-205ENST00000554034 EPRSP07814 1512 aaKnown RBP26.03■■□□□ 1.76
CDH24-205ENST00000554034 NCOA1Q15788 1441 aa26■■□□□ 1.75
CDH24-205ENST00000554034 POLR3GLQ9BT43 218 aa26■■□□□ 1.75
CDH24-205ENST00000554034 PPP4R2Q9NY27 417 aa25.97■■□□□ 1.75
CDH24-205ENST00000554034 KIF7Q2M1P5 1343 aa25.97■■□□□ 1.75
CDH24-205ENST00000554034 SLC4A1APQ9BWU0 796 aaKnown RBP25.97■■□□□ 1.75
CDH24-205ENST00000554034 ANKRD30BQ9BXX2 1392 aa25.94■■□□□ 1.74
CDH24-205ENST00000554034 ZNF326Q5BKZ1 582 aaKnown RBP25.94■■□□□ 1.74
CDH24-205ENST00000554034 FANCIQ9NVI1 1328 aa25.94■■□□□ 1.74
CDH24-205ENST00000554034 ERICH6Q7L0X2 663 aa25.92■■□□□ 1.74
CDH24-205ENST00000554034 AKNAQ7Z591 1439 aa25.92■■□□□ 1.74
CDH24-205ENST00000554034 ZBED9Q6R2W3 1325 aa25.9■■□□□ 1.74
CDH24-205ENST00000554034 MIA2Q96PC5 1412 aa25.9■■□□□ 1.74
CDH24-205ENST00000554034 RPRD2Q5VT52 1461 aaKnown RBP25.89■■□□□ 1.74
CDH24-205ENST00000554034 IQGAP2Q13576 1575 aa25.89■■□□□ 1.73
CDH24-205ENST00000554034 DAPK1P53355 1430 aa25.89■■□□□ 1.73
CDH24-205ENST00000554034 TEX14Q8IWB6 1497 aa25.88■■□□□ 1.73
CDH24-205ENST00000554034 TARBP1Q13395 1621 aaKnown RBP25.86■■□□□ 1.73
CDH24-205ENST00000554034 ABCC5O15440 1437 aa25.86■■□□□ 1.73
CDH24-205ENST00000554034 WDR62O43379 1518 aa25.85■■□□□ 1.73
CDH24-205ENST00000554034 SPATA31E1Q6ZUB1 1445 aa25.83■■□□□ 1.73
CDH24-205ENST00000554034 ERICH6BQ5W0A0 696 aa25.81■■□□□ 1.72
CDH24-205ENST00000554034 ZNF777Q9ULD5 760 aaPredicted RBP25.8■■□□□ 1.72
CDH24-205ENST00000554034 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
CDH24-205ENST00000554034 ROCK1Q13464 1354 aa25.75■■□□□ 1.71
CDH24-205ENST00000554034 MRC2Q9UBG0 1479 aa25.75■■□□□ 1.71
CDH24-205ENST00000554034 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
CDH24-205ENST00000554034 DNMT1P26358 1616 aaKnown RBP25.72■■□□□ 1.71
CDH24-205ENST00000554034 DHX29Q7Z478 1369 aaKnown RBP25.71■■□□□ 1.71
CDH24-205ENST00000554034 ZNF608Q9ULD9 1512 aaPredicted RBP25.71■■□□□ 1.71
CDH24-205ENST00000554034 USP47Q96K76 1375 aa25.71■■□□□ 1.71
CDH24-205ENST00000554034 NUP153P49790 1475 aaKnown RBP25.7■■□□□ 1.71
CDH24-205ENST00000554034 PZPP20742 1482 aa25.7■■□□□ 1.7
CDH24-205ENST00000554034 CFDP1Q9UEE9 299 aaPredicted RBP25.7■■□□□ 1.7
CDH24-205ENST00000554034 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
CDH24-205ENST00000554034 PKD2Q13563 968 aa25.69■■□□□ 1.7
CDH24-205ENST00000554034 BCORL1Q5H9F3 1711 aa25.65■■□□□ 1.7
CDH24-205ENST00000554034 DISP1Q96F81 1524 aa25.65■■□□□ 1.7
CDH24-205ENST00000554034 NUDCQ9Y266 331 aa25.64■■□□□ 1.69
CDH24-205ENST00000554034 CCDC136Q96JN2 1154 aa25.62■■□□□ 1.69
CDH24-205ENST00000554034 PAK3O75914 559 aaPredicted RBP25.62■■□□□ 1.69
CDH24-205ENST00000554034 SMG6Q86US8 1419 aaKnown RBP25.62■■□□□ 1.69
CDH24-205ENST00000554034 KDM2AQ9Y2K7 1162 aa25.61■■□□□ 1.69
CDH24-205ENST00000554034 CAMSAP2Q08AD1 1489 aa25.61■■□□□ 1.69
CDH24-205ENST00000554034 NBR1Q14596 966 aa25.6■■□□□ 1.69
CDH24-205ENST00000554034 KIAA0556O60303 1618 aa25.6■■□□□ 1.69
CDH24-205ENST00000554034 POLR1AO95602 1720 aaPredicted RBP25.59■■□□□ 1.69
CDH24-205ENST00000554034 TMC1Q8TDI8 760 aa25.59■■□□□ 1.69
CDH24-205ENST00000554034 KIAA1107Q9UPP5 1409 aa25.58■■□□□ 1.69
CDH24-205ENST00000554034 SALL2Q9Y467 1007 aaPredicted RBP25.57■■□□□ 1.68
CDH24-205ENST00000554034 MBD5Q9P267 1494 aa25.57■■□□□ 1.68
CDH24-205ENST00000554034 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
CDH24-205ENST00000554034 PNISRQ8TF01 805 aaKnown RBP25.56■■□□□ 1.68
CDH24-205ENST00000554034 CARD11Q9BXL7 1154 aa25.56■■□□□ 1.68
CDH24-205ENST00000554034 RAPGEF6Q8TEU7 1601 aa25.55■■□□□ 1.68
CDH24-205ENST00000554034 PLB1Q6P1J6 1458 aa25.55■■□□□ 1.68
CDH24-205ENST00000554034 NOP58Q9Y2X3 529 aaKnown RBP25.54■■□□□ 1.68
CDH24-205ENST00000554034 KIAA0586Q9BVV6 1533 aa25.53■■□□□ 1.68
CDH24-205ENST00000554034 GPATCH8Q9UKJ3 1502 aaKnown RBP25.52■■□□□ 1.68
CDH24-205ENST00000554034 TROQ12816 1431 aaPredicted RBP25.52■■□□□ 1.68
CDH24-205ENST00000554034 ST20-MTHFSA0A0A6YYL1 179 aa25.51■■□□□ 1.67
CDH24-205ENST00000554034 FBLN2P98095 1184 aa25.51■■□□□ 1.67
CDH24-205ENST00000554034 KIF14Q15058 1648 aa25.51■■□□□ 1.67
CDH24-205ENST00000554034 IFT140Q96RY7 1462 aa25.5■■□□□ 1.67
CDH24-205ENST00000554034 NUP155O75694 1391 aa25.49■■□□□ 1.67
CDH24-205ENST00000554034 KDM5CP41229 1560 aa25.49■■□□□ 1.67
CDH24-205ENST00000554034 RNF123Q5XPI4 1314 aa25.48■■□□□ 1.67
CDH24-205ENST00000554034 DEKP35659 375 aaKnown RBP25.48■■□□□ 1.67
CDH24-205ENST00000554034 ANKRD50Q9ULJ7 1429 aa25.48■■□□□ 1.67
CDH24-205ENST00000554034 DCAF11Q8TEB1 546 aa25.46■■□□□ 1.67
CDH24-205ENST00000554034 ANKRD30AQ9BXX3 1397 aa25.46■■□□□ 1.67
CDH24-205ENST00000554034 GRIN2AQ12879 1464 aa25.43■■□□□ 1.66
CDH24-205ENST00000554034 EIF4G3O43432 1585 aaKnown RBP25.42■■□□□ 1.66
CDH24-205ENST00000554034 CHMP7Q8WUX9 453 aaPredicted RBP25.4■■□□□ 1.66
CDH24-205ENST00000554034 ADGBQ8N7X0 1667 aa25.4■■□□□ 1.66
CDH24-205ENST00000554034 ANP32AP39687 249 aaKnown RBP25.39■■□□□ 1.65
CDH24-205ENST00000554034 KIF15Q9NS87 1388 aa25.38■■□□□ 1.65
CDH24-205ENST00000554034 EXOC6Q8TAG9 804 aa25.38■■□□□ 1.65
CDH24-205ENST00000554034 ADGRL2O95490 1459 aa25.38■■□□□ 1.65
CDH24-205ENST00000554034 RALGAPBQ86X10 1494 aa25.37■■□□□ 1.65
CDH24-205ENST00000554034 NPM2Q86SE8 214 aaKnown RBP25.37■■□□□ 1.65
CDH24-205ENST00000554034 HNRNPMP52272 730 aaKnown RBP eCLIP25.36■■□□□ 1.65
CDH24-205ENST00000554034 ARID4BQ4LE39 1312 aaPredicted RBP25.36■■□□□ 1.65
CDH24-205ENST00000554034 ITSN2Q9NZM3 1697 aa25.35■■□□□ 1.65
CDH24-205ENST00000554034 MYBBP1AQ9BQG0 1328 aaKnown RBP25.35■■□□□ 1.65
CDH24-205ENST00000554034 ROCK2O75116 1388 aaKnown RBP25.35■■□□□ 1.65
CDH24-205ENST00000554034 IPO9Q96P70 1041 aaKnown RBP25.34■■□□□ 1.65
CDH24-205ENST00000554034 C9orf84Q5VXU9 1444 aa25.34■■□□□ 1.65
CDH24-205ENST00000554034 RGL3Q3MIN7 710 aa25.33■■□□□ 1.65
CDH24-205ENST00000554034 UHRF1BP1Q6BDS2 1440 aa25.33■■□□□ 1.65
CDH24-205ENST00000554034 RRP1P56182 461 aaKnown RBP25.33■■□□□ 1.64
CDH24-205ENST00000554034 CROCC2H7BZ55 1655 aa25.32■■□□□ 1.64
CDH24-205ENST00000554034 LRPPRCP42704 1394 aaKnown RBP25.32■■□□□ 1.64
CDH24-205ENST00000554034 PLEKHD1A6NEE1 506 aa25.31■■□□□ 1.64
CDH24-205ENST00000554034 TSPY4P0CV99 314 aa25.31■■□□□ 1.64
CDH24-205ENST00000554034 TSPY10P0CW01 314 aa25.31■■□□□ 1.64
CDH24-205ENST00000554034 CDCA7LQ96GN5 454 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms