RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 DENND4BO75064 1496 aaPredicted RBP36.76■■■■□ 3.48
NEK9-203ENST00000553945 ADGRL1O94910 1474 aa36.75■■■■□ 3.47
NEK9-203ENST00000553945 FRMPD1Q5SYB0 1578 aa36.74■■■■□ 3.47
NEK9-203ENST00000553945 RICTORQ6R327 1708 aa36.71■■■■□ 3.47
NEK9-203ENST00000553945 SCAPERQ9BY12 1400 aa36.7■■■■□ 3.47
NEK9-203ENST00000553945 MAP3K1Q13233 1512 aa36.67■■■■□ 3.46
NEK9-203ENST00000553945 GPATCH8Q9UKJ3 1502 aaKnown RBP36.67■■■■□ 3.46
NEK9-203ENST00000553945 CCNB3Q8WWL7 1395 aa36.66■■■■□ 3.46
NEK9-203ENST00000553945 LRRC9Q6ZRR7 1453 aa36.63■■■■□ 3.45
NEK9-203ENST00000553945 SUPT6HQ7KZ85 1726 aaKnown RBP36.63■■■■□ 3.45
NEK9-203ENST00000553945 APLP2Q06481 763 aa36.61■■■■□ 3.45
NEK9-203ENST00000553945 POGZQ7Z3K3 1410 aa36.6■■■■□ 3.45
NEK9-203ENST00000553945 ZNF777Q9ULD5 760 aaPredicted RBP36.59■■■■□ 3.45
NEK9-203ENST00000553945 NCOA2Q15596 1464 aa36.58■■■■□ 3.45
NEK9-203ENST00000553945 KANK4Q5T7N3 995 aaPredicted RBP36.57■■■■□ 3.44
NEK9-203ENST00000553945 CFDP1Q9UEE9 299 aaPredicted RBP36.57■■■■□ 3.44
NEK9-203ENST00000553945 ABCC1P33527 1531 aa36.55■■■■□ 3.44
NEK9-203ENST00000553945 ZMYM4Q5VZL5 1548 aa36.55■■■■□ 3.44
NEK9-203ENST00000553945 ITSN2Q9NZM3 1697 aa36.55■■■■□ 3.44
NEK9-203ENST00000553945 SAMD9LQ8IVG5 1584 aa36.53■■■■□ 3.44
NEK9-203ENST00000553945 ZNF518AQ6AHZ1 1483 aa36.5■■■■□ 3.43
NEK9-203ENST00000553945 ARHGEF12Q9NZN5 1544 aa36.49■■■■□ 3.43
NEK9-203ENST00000553945 ARHGEF40Q8TER5 1519 aa36.49■■■■□ 3.43
NEK9-203ENST00000553945 AFAP1Q8N556 730 aa36.48■■■■□ 3.43
NEK9-203ENST00000553945 ZFYVE16Q7Z3T8 1539 aa36.47■■■■□ 3.43
NEK9-203ENST00000553945 MAGI2Q86UL8 1455 aa36.46■■■■□ 3.43
NEK9-203ENST00000553945 TRAPPC8Q9Y2L5 1435 aa36.44■■■■□ 3.42
NEK9-203ENST00000553945 KDM4FA0A1W2PPD8 638 aa36.44■■■■□ 3.42
NEK9-203ENST00000553945 SYCP2Q9BX26 1530 aa36.44■■■■□ 3.42
NEK9-203ENST00000553945 YEATS2Q9ULM3 1422 aa36.43■■■■□ 3.42
NEK9-203ENST00000553945 KDM5CP41229 1560 aa36.43■■■■□ 3.42
NEK9-203ENST00000553945 AEBP2Q6ZN18 517 aaPredicted RBP36.42■■■■□ 3.42
NEK9-203ENST00000553945 PLEKHH2Q8IVE3 1493 aa36.42■■■■□ 3.42
NEK9-203ENST00000553945 HNRNPMP52272 730 aaKnown RBP eCLIP36.4■■■■□ 3.42
NEK9-203ENST00000553945 MYT1LQ9UL68 1186 aa36.4■■■■□ 3.42
NEK9-203ENST00000553945 ZNF644Q9H582 1327 aaPredicted RBP36.38■■■■□ 3.41
NEK9-203ENST00000553945 KIAA1107Q9UPP5 1409 aa36.38■■■■□ 3.41
NEK9-203ENST00000553945 HECW2Q9P2P5 1572 aa36.37■■■■□ 3.41
NEK9-203ENST00000553945 ARID4BQ4LE39 1312 aaPredicted RBP36.33■■■■□ 3.41
NEK9-203ENST00000553945 MLH3Q9UHC1 1453 aa36.31■■■■□ 3.4
NEK9-203ENST00000553945 CAMSAP2Q08AD1 1489 aa36.29■■■■□ 3.4
NEK9-203ENST00000553945 ATP10AO60312 1499 aa36.28■■■■□ 3.4
NEK9-203ENST00000553945 MYOM3Q5VTT5 1437 aa36.27■■■■□ 3.4
NEK9-203ENST00000553945 SPAG9O60271 1321 aaKnown RBP36.25■■■■□ 3.39
NEK9-203ENST00000553945 DIP2CQ9Y2E4 1556 aa36.24■■■■□ 3.39
NEK9-203ENST00000553945 ABCA6Q8N139 1617 aa36.24■■■■□ 3.39
NEK9-203ENST00000553945 KIDINS220Q9ULH0 1771 aa36.24■■■■□ 3.39
NEK9-203ENST00000553945 C9orf84Q5VXU9 1444 aa36.24■■■■□ 3.39
NEK9-203ENST00000553945 MBD5Q9P267 1494 aa36.24■■■■□ 3.39
NEK9-203ENST00000553945 SIGLEC1Q9BZZ2 1709 aa36.23■■■■□ 3.39
NEK9-203ENST00000553945 BCORL1Q5H9F3 1711 aa36.2■■■■□ 3.39
NEK9-203ENST00000553945 MIA2Q96PC5 1412 aa36.2■■■■□ 3.39
NEK9-203ENST00000553945 ATP7AQ04656 1500 aa36.16■■■■□ 3.38
NEK9-203ENST00000553945 INO80Q9ULG1 1556 aaPredicted RBP36.15■■■■□ 3.38
NEK9-203ENST00000553945 ADAMTSL3P82987 1691 aa36.15■■■■□ 3.38
NEK9-203ENST00000553945 CCDC141Q6ZP82 1450 aa36.14■■■■□ 3.38
NEK9-203ENST00000553945 REREQ9P2R6 1566 aa36.12■■■■□ 3.37
NEK9-203ENST00000553945 ARHGEF5Q12774 1597 aa36.11■■■■□ 3.37
NEK9-203ENST00000553945 RSPH4AQ5TD94 716 aa36.11■■■■□ 3.37
NEK9-203ENST00000553945 MLECQ14165 292 aa36.1■■■■□ 3.37
NEK9-203ENST00000553945 PTPN23Q9H3S7 1636 aa36.08■■■■□ 3.37
NEK9-203ENST00000553945 MADDQ8WXG6 1647 aa36.07■■■■□ 3.36
NEK9-203ENST00000553945 FGD6Q6ZV73 1430 aa36.07■■■■□ 3.36
NEK9-203ENST00000553945 PPARGC1BQ86YN6 1023 aaKnown RBP36.04■■■■□ 3.36
NEK9-203ENST00000553945 RTEL1-TNFRSF6BF6WH68 1400 aa36.03■■■■□ 3.36
NEK9-203ENST00000553945 TSPY4P0CV99 314 aa36.02■■■■□ 3.36
NEK9-203ENST00000553945 TSPY10P0CW01 314 aa36.02■■■■□ 3.36
NEK9-203ENST00000553945 AGLP35573 1532 aa36■■■■□ 3.35
NEK9-203ENST00000553945 ADGBQ8N7X0 1667 aa35.99■■■■□ 3.35
NEK9-203ENST00000553945 A2MP01023 1474 aa35.98■■■■□ 3.35
NEK9-203ENST00000553945 RIMS1Q86UR5 1692 aaKnown RBP35.97■■■■□ 3.35
NEK9-203ENST00000553945 TCOF1Q13428 1488 aaKnown RBP35.97■■■■□ 3.35
NEK9-203ENST00000553945 FER1L4A9Z1Z3 1794 aa35.95■■■■□ 3.35
NEK9-203ENST00000553945 PTPRMP28827 1452 aa35.95■■■■□ 3.35
NEK9-203ENST00000553945 PLXNC1O60486 1568 aa35.93■■■■□ 3.34
NEK9-203ENST00000553945 MAST1Q9Y2H9 1570 aa35.92■■■■□ 3.34
NEK9-203ENST00000553945 CROCC2H7BZ55 1655 aa35.88■■■■□ 3.33
NEK9-203ENST00000553945 ABCC5O15440 1437 aa35.87■■■■□ 3.33
NEK9-203ENST00000553945 FAM50AQ14320 339 aaKnown RBP35.87■■■■□ 3.33
NEK9-203ENST00000553945 DNMT1P26358 1616 aaKnown RBP35.86■■■■□ 3.33
NEK9-203ENST00000553945 DHX29Q7Z478 1369 aaKnown RBP35.85■■■■□ 3.33
NEK9-203ENST00000553945 DAPK1P53355 1430 aa35.84■■■■□ 3.33
NEK9-203ENST00000553945 PLPPR3Q6T4P5 718 aa35.82■■■■□ 3.32
NEK9-203ENST00000553945 SHANK2Q9UPX8 1470 aa35.81■■■■□ 3.32
NEK9-203ENST00000553945 ESF1Q9H501 851 aaKnown RBP35.79■■■■□ 3.32
NEK9-203ENST00000553945 GGT6Q6P531 493 aa35.76■■■■□ 3.32
NEK9-203ENST00000553945 KIF3BO15066 747 aa35.73■■■■□ 3.31
NEK9-203ENST00000553945 CHIC2Q9UKJ5 165 aa35.72■■■■□ 3.31
NEK9-203ENST00000553945 RRP7BPQ9NSQ0 103 aa35.69■■■■□ 3.3
NEK9-203ENST00000553945 CNTLNQ9NXG0 1405 aa35.68■■■■□ 3.3
NEK9-203ENST00000553945 KIF15Q9NS87 1388 aa35.68■■■■□ 3.3
NEK9-203ENST00000553945 DUOX2Q9NRD8 1548 aa35.67■■■■□ 3.3
NEK9-203ENST00000553945 CEBPAP49715 358 aaPredicted RBP35.67■■■■□ 3.3
NEK9-203ENST00000553945 ANKRD30AQ9BXX3 1397 aa35.65■■■■□ 3.3
NEK9-203ENST00000553945 CLTCQ00610 1675 aaKnown RBP35.65■■■■□ 3.3
NEK9-203ENST00000553945 C3P01024 1663 aa35.64■■■■□ 3.3
NEK9-203ENST00000553945 EIF2AK4Q9P2K8 1649 aaKnown RBP35.62■■■■□ 3.29
NEK9-203ENST00000553945 MROH2AA6NES4 1674 aa35.62■■■■□ 3.29
NEK9-203ENST00000553945 PPP6R1Q9UPN7 881 aa35.61■■■■□ 3.29
NEK9-203ENST00000553945 ADGRL2O95490 1459 aa35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms