RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 TTC37Q6PGP7 1564 aa10.38□□□□□ -0.75
FOXN3-205ENST00000553904 ATP10AO60312 1499 aa10.37□□□□□ -0.75
FOXN3-205ENST00000553904 PTPRMP28827 1452 aa10.37□□□□□ -0.75
FOXN3-205ENST00000553904 ZNF518AQ6AHZ1 1483 aa10.37□□□□□ -0.75
FOXN3-205ENST00000553904 CFDP1Q9UEE9 299 aaPredicted RBP10.37□□□□□ -0.75
FOXN3-205ENST00000553904 ZFYVE16Q7Z3T8 1539 aa10.37□□□□□ -0.75
FOXN3-205ENST00000553904 MTUS2Q5JR59 1369 aa10.37□□□□□ -0.75
FOXN3-205ENST00000553904 ZMYM4Q5VZL5 1548 aa10.36□□□□□ -0.75
FOXN3-205ENST00000553904 FRMPD1Q5SYB0 1578 aa10.35□□□□□ -0.75
FOXN3-205ENST00000553904 YEATS2Q9ULM3 1422 aa10.35□□□□□ -0.75
FOXN3-205ENST00000553904 PLPPR3Q6T4P5 718 aa10.34□□□□□ -0.75
FOXN3-205ENST00000553904 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
FOXN3-205ENST00000553904 C9orf84Q5VXU9 1444 aa10.33□□□□□ -0.76
FOXN3-205ENST00000553904 ARHGEF40Q8TER5 1519 aa10.33□□□□□ -0.76
FOXN3-205ENST00000553904 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
FOXN3-205ENST00000553904 MYO5CQ9NQX4 1742 aa10.33□□□□□ -0.76
FOXN3-205ENST00000553904 ADAMTSL3P82987 1691 aa10.33□□□□□ -0.76
FOXN3-205ENST00000553904 PCF11O94913 1555 aaKnown RBP10.32□□□□□ -0.76
FOXN3-205ENST00000553904 HNRNPMP52272 730 aaKnown RBP eCLIP10.32□□□□□ -0.766e-6■■■■□ 20.3
FOXN3-205ENST00000553904 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
FOXN3-205ENST00000553904 SPAG9O60271 1321 aaKnown RBP10.32□□□□□ -0.76
FOXN3-205ENST00000553904 HECW2Q9P2P5 1572 aa10.31□□□□□ -0.76
FOXN3-205ENST00000553904 MLH3Q9UHC1 1453 aa10.31□□□□□ -0.76
FOXN3-205ENST00000553904 BCORL1Q5H9F3 1711 aa10.31□□□□□ -0.76
FOXN3-205ENST00000553904 LOC105371045A0A1W2PR82 267 aa10.31□□□□□ -0.76
FOXN3-205ENST00000553904 CEP162Q5TB80 1403 aa10.31□□□□□ -0.76
FOXN3-205ENST00000553904 PLEKHH2Q8IVE3 1493 aa10.3□□□□□ -0.76
FOXN3-205ENST00000553904 KIAA1107Q9UPP5 1409 aa10.3□□□□□ -0.76
FOXN3-205ENST00000553904 GPATCH8Q9UKJ3 1502 aaKnown RBP10.29□□□□□ -0.76
FOXN3-205ENST00000553904 APLP2Q06481 763 aa10.29□□□□□ -0.76
FOXN3-205ENST00000553904 TRAPPC8Q9Y2L5 1435 aa10.29□□□□□ -0.76
FOXN3-205ENST00000553904 PPP6R1Q9UPN7 881 aa10.28□□□□□ -0.76
FOXN3-205ENST00000553904 DMRT2Q9Y5R5 561 aa10.28□□□□□ -0.76
FOXN3-205ENST00000553904 MADDQ8WXG6 1647 aa10.27□□□□□ -0.77
FOXN3-205ENST00000553904 KDM5CP41229 1560 aa10.26□□□□□ -0.77
FOXN3-205ENST00000553904 TSPY4P0CV99 314 aa10.26□□□□□ -0.77
FOXN3-205ENST00000553904 TSPY10P0CW01 314 aa10.26□□□□□ -0.77
FOXN3-205ENST00000553904 CEBPAP49715 358 aaPredicted RBP10.26□□□□□ -0.77
FOXN3-205ENST00000553904 ILDR1Q86SU0 546 aaPredicted RBP10.26□□□□□ -0.77
FOXN3-205ENST00000553904 PREX2Q70Z35 1606 aa10.25□□□□□ -0.77
FOXN3-205ENST00000553904 LRRIQ1Q96JM4 1722 aa10.25□□□□□ -0.77
FOXN3-205ENST00000553904 CDC42BPBQ9Y5S2 1711 aa10.25□□□□□ -0.77
FOXN3-205ENST00000553904 ABCC1P33527 1531 aa10.25□□□□□ -0.77
FOXN3-205ENST00000553904 ARHGEF12Q9NZN5 1544 aa10.25□□□□□ -0.77
FOXN3-205ENST00000553904 HSPA2P54652 639 aa10.24□□□□□ -0.77
FOXN3-205ENST00000553904 CNTLNQ9NXG0 1405 aa10.24□□□□□ -0.77
FOXN3-205ENST00000553904 AGLP35573 1532 aa10.23□□□□□ -0.77
FOXN3-205ENST00000553904 REREQ9P2R6 1566 aa10.23□□□□□ -0.77
FOXN3-205ENST00000553904 RIMS1Q86UR5 1692 aaKnown RBP10.23□□□□□ -0.77
FOXN3-205ENST00000553904 GGT6Q6P531 493 aa10.23□□□□□ -0.77
FOXN3-205ENST00000553904 ZNF644Q9H582 1327 aaPredicted RBP10.23□□□□□ -0.77
FOXN3-205ENST00000553904 FBXO41Q8TF61 875 aa10.22□□□□□ -0.77
FOXN3-205ENST00000553904 LMTK3Q96Q04 1460 aa10.22□□□□□ -0.77
FOXN3-205ENST00000553904 EHBP1L1Q8N3D4 1523 aa10.22□□□□□ -0.77
FOXN3-205ENST00000553904 RTEL1-TNFRSF6BF6WH68 1400 aa10.21□□□□□ -0.78
FOXN3-205ENST00000553904 UHRF1BP1Q6BDS2 1440 aa10.21□□□□□ -0.78
FOXN3-205ENST00000553904 VPS8Q8N3P4 1428 aa10.21□□□□□ -0.78
FOXN3-205ENST00000553904 DIP2CQ9Y2E4 1556 aa10.21□□□□□ -0.78
FOXN3-205ENST00000553904 ZMYM3Q14202 1370 aa10.2□□□□□ -0.78
FOXN3-205ENST00000553904 CDC42BPAQ5VT25 1732 aa10.2□□□□□ -0.78
FOXN3-205ENST00000553904 SAMD9LQ8IVG5 1584 aa10.2□□□□□ -0.78
FOXN3-205ENST00000553904 SYCP2Q9BX26 1530 aa10.2□□□□□ -0.78
FOXN3-205ENST00000553904 A2MP01023 1474 aa10.19□□□□□ -0.78
FOXN3-205ENST00000553904 ITSN2Q9NZM3 1697 aa10.18□□□□□ -0.78
FOXN3-205ENST00000553904 NCOA2Q15596 1464 aa10.18□□□□□ -0.78
FOXN3-205ENST00000553904 DHX29Q7Z478 1369 aaKnown RBP10.18□□□□□ -0.78
FOXN3-205ENST00000553904 KIF3BO15066 747 aa10.18□□□□□ -0.78
FOXN3-205ENST00000553904 FER1L4A9Z1Z3 1794 aa10.18□□□□□ -0.78
FOXN3-205ENST00000553904 ATP7AQ04656 1500 aa10.17□□□□□ -0.78
FOXN3-205ENST00000553904 MBD5Q9P267 1494 aa10.17□□□□□ -0.78
FOXN3-205ENST00000553904 KIDINS220Q9ULH0 1771 aa10.17□□□□□ -0.78
FOXN3-205ENST00000553904 MAP3K1Q13233 1512 aa10.17□□□□□ -0.78
FOXN3-205ENST00000553904 LRRC9Q6ZRR7 1453 aa10.17□□□□□ -0.78
FOXN3-205ENST00000553904 ABCA6Q8N139 1617 aa10.16□□□□□ -0.78
FOXN3-205ENST00000553904 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
FOXN3-205ENST00000553904 SIGLEC1Q9BZZ2 1709 aa10.16□□□□□ -0.78
FOXN3-205ENST00000553904 NPATQ14207 1427 aa10.16□□□□□ -0.78
FOXN3-205ENST00000553904 WASHC2CQ9Y4E1 1318 aa10.15□□□□□ -0.78
FOXN3-205ENST00000553904 TIAM1Q13009 1591 aa10.15□□□□□ -0.78
FOXN3-205ENST00000553904 CERKQ8TCT0 537 aa10.15□□□□□ -0.78
FOXN3-205ENST00000553904 SUPT6HQ7KZ85 1726 aaKnown RBP10.15□□□□□ -0.78
FOXN3-205ENST00000553904 CCDC141Q6ZP82 1450 aa10.15□□□□□ -0.78
FOXN3-205ENST00000553904 MIA2Q96PC5 1412 aa10.15□□□□□ -0.79
FOXN3-205ENST00000553904 SETD1BQ9UPS6 1966 aaKnown RBP10.14□□□□□ -0.79
FOXN3-205ENST00000553904 PKD2Q13563 968 aa10.13□□□□□ -0.79
FOXN3-205ENST00000553904 PREX1Q8TCU6 1659 aa10.12□□□□□ -0.79
FOXN3-205ENST00000553904 CAMSAP2Q08AD1 1489 aa10.11□□□□□ -0.79
FOXN3-205ENST00000553904 MYOM3Q5VTT5 1437 aa10.11□□□□□ -0.79
FOXN3-205ENST00000553904 INO80Q9ULG1 1556 aaPredicted RBP10.1□□□□□ -0.79
FOXN3-205ENST00000553904 PTPRTO14522 1441 aa10.1□□□□□ -0.79
FOXN3-205ENST00000553904 THEMISQ8N1K5 641 aaPredicted RBP10.1□□□□□ -0.79
FOXN3-205ENST00000553904 ADGBQ8N7X0 1667 aa10.09□□□□□ -0.79
FOXN3-205ENST00000553904 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
FOXN3-205ENST00000553904 C3P01024 1663 aa10.09□□□□□ -0.79
FOXN3-205ENST00000553904 ARHGEF5Q12774 1597 aa10.08□□□□□ -0.8
FOXN3-205ENST00000553904 PTPRKQ15262 1439 aa10.07□□□□□ -0.8
FOXN3-205ENST00000553904 MROH2AA6NES4 1674 aa10.07□□□□□ -0.8
FOXN3-205ENST00000553904 ANKLE2Q86XL3 938 aa10.07□□□□□ -0.8
FOXN3-205ENST00000553904 RRP7BPQ9NSQ0 103 aa10.07□□□□□ -0.8
FOXN3-205ENST00000553904 NCKAP5LQ9HCH0 1330 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms