RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 EHBP1L1Q8N3D4 1523 aa14.66□□□□□ -0.06
CHD8-206ENST00000553870 MYO5CQ9NQX4 1742 aa14.65□□□□□ -0.06
CHD8-206ENST00000553870 DENND4BO75064 1496 aaPredicted RBP14.64□□□□□ -0.07
CHD8-206ENST00000553870 CCNB3Q8WWL7 1395 aa14.64□□□□□ -0.07
CHD8-206ENST00000553870 RAPGEF3O95398 923 aa14.64□□□□□ -0.07
CHD8-206ENST00000553870 LRRC9Q6ZRR7 1453 aa14.63□□□□□ -0.07
CHD8-206ENST00000553870 ARHGAP5Q13017 1502 aa14.63□□□□□ -0.07
CHD8-206ENST00000553870 GPATCH8Q9UKJ3 1502 aaKnown RBP14.63□□□□□ -0.07
CHD8-206ENST00000553870 CFDP1Q9UEE9 299 aaPredicted RBP14.63□□□□□ -0.07
CHD8-206ENST00000553870 SCAPERQ9BY12 1400 aa14.62□□□□□ -0.07
CHD8-206ENST00000553870 ADGRL1O94910 1474 aa14.62□□□□□ -0.07
CHD8-206ENST00000553870 PREX2Q70Z35 1606 aa14.6□□□□□ -0.07
CHD8-206ENST00000553870 KANK4Q5T7N3 995 aaPredicted RBP14.6□□□□□ -0.07
CHD8-206ENST00000553870 CDC42BPBQ9Y5S2 1711 aa14.59□□□□□ -0.07
CHD8-206ENST00000553870 SUPT6HQ7KZ85 1726 aaKnown RBP14.58□□□□□ -0.07
CHD8-206ENST00000553870 NCOA2Q15596 1464 aa14.58□□□□□ -0.08
CHD8-206ENST00000553870 CDC42BPAQ5VT25 1732 aa14.58□□□□□ -0.08
CHD8-206ENST00000553870 KIAA1107Q9UPP5 1409 aa14.58□□□□□ -0.08
CHD8-206ENST00000553870 MAGI2Q86UL8 1455 aa14.57□□□□□ -0.08
CHD8-206ENST00000553870 PLEKHH2Q8IVE3 1493 aa14.57□□□□□ -0.08
CHD8-206ENST00000553870 ZNF777Q9ULD5 760 aaPredicted RBP14.57□□□□□ -0.08
CHD8-206ENST00000553870 POGZQ7Z3K3 1410 aa14.57□□□□□ -0.08
CHD8-206ENST00000553870 RSPH4AQ5TD94 716 aa14.55□□□□□ -0.08
CHD8-206ENST00000553870 AFAP1Q8N556 730 aa14.55□□□□□ -0.08
CHD8-206ENST00000553870 ZNF518AQ6AHZ1 1483 aa14.55□□□□□ -0.08
CHD8-206ENST00000553870 FRMPD1Q5SYB0 1578 aa14.54□□□□□ -0.08
CHD8-206ENST00000553870 RICTORQ6R327 1708 aa14.54□□□□□ -0.08
CHD8-206ENST00000553870 ZMYM4Q5VZL5 1548 aa14.53□□□□□ -0.08
CHD8-206ENST00000553870 ITSN2Q9NZM3 1697 aa14.52□□□□□ -0.08
CHD8-206ENST00000553870 ABCC1P33527 1531 aa14.52□□□□□ -0.08
CHD8-206ENST00000553870 HNRNPMP52272 730 aaKnown RBP eCLIP14.52□□□□□ -0.09
CHD8-206ENST00000553870 MIA2Q96PC5 1412 aa14.51□□□□□ -0.09
CHD8-206ENST00000553870 ARHGEF12Q9NZN5 1544 aa14.51□□□□□ -0.09
CHD8-206ENST00000553870 TRAPPC8Q9Y2L5 1435 aa14.5□□□□□ -0.09
CHD8-206ENST00000553870 SAMD9LQ8IVG5 1584 aa14.5□□□□□ -0.09
CHD8-206ENST00000553870 MLH3Q9UHC1 1453 aa14.5□□□□□ -0.09
CHD8-206ENST00000553870 ZNF644Q9H582 1327 aaPredicted RBP14.49□□□□□ -0.09
CHD8-206ENST00000553870 KDM5CP41229 1560 aa14.49□□□□□ -0.09
CHD8-206ENST00000553870 MYOM3Q5VTT5 1437 aa14.49□□□□□ -0.09
CHD8-206ENST00000553870 MYT1LQ9UL68 1186 aa14.48□□□□□ -0.09
CHD8-206ENST00000553870 SPAG9O60271 1321 aaKnown RBP14.47□□□□□ -0.09
CHD8-206ENST00000553870 ZFYVE16Q7Z3T8 1539 aa14.47□□□□□ -0.09
CHD8-206ENST00000553870 ATP10AO60312 1499 aa14.47□□□□□ -0.09
CHD8-206ENST00000553870 MBD5Q9P267 1494 aa14.46□□□□□ -0.09
CHD8-206ENST00000553870 YEATS2Q9ULM3 1422 aa14.46□□□□□ -0.09
CHD8-206ENST00000553870 ARHGEF40Q8TER5 1519 aa14.46□□□□□ -0.1
CHD8-206ENST00000553870 SYCP2Q9BX26 1530 aa14.46□□□□□ -0.1
CHD8-206ENST00000553870 KDM4FA0A1W2PPD8 638 aa14.45□□□□□ -0.1
CHD8-206ENST00000553870 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
CHD8-206ENST00000553870 TSPY4P0CV99 314 aa14.44□□□□□ -0.1
CHD8-206ENST00000553870 TSPY10P0CW01 314 aa14.44□□□□□ -0.1
CHD8-206ENST00000553870 CAMSAP2Q08AD1 1489 aa14.44□□□□□ -0.1
CHD8-206ENST00000553870 HECW2Q9P2P5 1572 aa14.43□□□□□ -0.1
CHD8-206ENST00000553870 RTEL1-TNFRSF6BF6WH68 1400 aa14.43□□□□□ -0.1
CHD8-206ENST00000553870 C9orf84Q5VXU9 1444 aa14.42□□□□□ -0.1
CHD8-206ENST00000553870 CCDC141Q6ZP82 1450 aa14.41□□□□□ -0.1
CHD8-206ENST00000553870 FGD6Q6ZV73 1430 aa14.41□□□□□ -0.1
CHD8-206ENST00000553870 ARHGEF5Q12774 1597 aa14.4□□□□□ -0.1
CHD8-206ENST00000553870 REREQ9P2R6 1566 aa14.39□□□□□ -0.11
CHD8-206ENST00000553870 KIDINS220Q9ULH0 1771 aa14.38□□□□□ -0.11
CHD8-206ENST00000553870 TCOF1Q13428 1488 aaKnown RBP14.38□□□□□ -0.11
CHD8-206ENST00000553870 ATP7AQ04656 1500 aa14.37□□□□□ -0.11
CHD8-206ENST00000553870 DIP2CQ9Y2E4 1556 aa14.37□□□□□ -0.11
CHD8-206ENST00000553870 AGLP35573 1532 aa14.36□□□□□ -0.11
CHD8-206ENST00000553870 PTPN23Q9H3S7 1636 aa14.36□□□□□ -0.11
CHD8-206ENST00000553870 INO80Q9ULG1 1556 aaPredicted RBP14.35□□□□□ -0.11
CHD8-206ENST00000553870 PPP6R1Q9UPN7 881 aa14.34□□□□□ -0.11
CHD8-206ENST00000553870 DHX29Q7Z478 1369 aaKnown RBP14.34□□□□□ -0.11
CHD8-206ENST00000553870 ABCA6Q8N139 1617 aa14.33□□□□□ -0.11
CHD8-206ENST00000553870 A2MP01023 1474 aa14.33□□□□□ -0.12
CHD8-206ENST00000553870 BCORL1Q5H9F3 1711 aa14.33□□□□□ -0.12
CHD8-206ENST00000553870 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.33□□□□□ -0.12
CHD8-206ENST00000553870 ADAMTSL3P82987 1691 aa14.33□□□□□ -0.12
CHD8-206ENST00000553870 ABCC5O15440 1437 aa14.32□□□□□ -0.12
CHD8-206ENST00000553870 MLECQ14165 292 aa14.32□□□□□ -0.12
CHD8-206ENST00000553870 FAM50AQ14320 339 aaKnown RBP14.32□□□□□ -0.12
CHD8-206ENST00000553870 PPARGC1BQ86YN6 1023 aaKnown RBP14.32□□□□□ -0.12
CHD8-206ENST00000553870 MAST1Q9Y2H9 1570 aa14.31□□□□□ -0.12
CHD8-206ENST00000553870 SHANK2Q9UPX8 1470 aa14.31□□□□□ -0.12
CHD8-206ENST00000553870 ADGBQ8N7X0 1667 aa14.3□□□□□ -0.12
CHD8-206ENST00000553870 DAPK1P53355 1430 aa14.3□□□□□ -0.12
CHD8-206ENST00000553870 ESF1Q9H501 851 aaKnown RBP14.29□□□□□ -0.12
CHD8-206ENST00000553870 SIGLEC1Q9BZZ2 1709 aa14.29□□□□□ -0.12
CHD8-206ENST00000553870 PLXNC1O60486 1568 aa14.28□□□□□ -0.12
CHD8-206ENST00000553870 DNMT1P26358 1616 aaKnown RBP14.28□□□□□ -0.12
CHD8-206ENST00000553870 ANKRD30AQ9BXX3 1397 aa14.27□□□□□ -0.12
CHD8-206ENST00000553870 PTPRMP28827 1452 aa14.26□□□□□ -0.13
CHD8-206ENST00000553870 MSH5O43196 834 aa14.26□□□□□ -0.13
CHD8-206ENST00000553870 CNTLNQ9NXG0 1405 aa14.25□□□□□ -0.13
CHD8-206ENST00000553870 KIF3BO15066 747 aa14.25□□□□□ -0.13
CHD8-206ENST00000553870 GGT6Q6P531 493 aa14.25□□□□□ -0.13
CHD8-206ENST00000553870 RRBP1Q9P2E9 1410 aaKnown RBP14.24□□□□□ -0.13
CHD8-206ENST00000553870 MADDQ8WXG6 1647 aa14.24□□□□□ -0.13
CHD8-206ENST00000553870 RRP7BPQ9NSQ0 103 aa14.24□□□□□ -0.13
CHD8-206ENST00000553870 DUOX2Q9NRD8 1548 aa14.24□□□□□ -0.13
CHD8-206ENST00000553870 NCOA1Q15788 1441 aa14.24□□□□□ -0.13
CHD8-206ENST00000553870 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
CHD8-206ENST00000553870 KIF15Q9NS87 1388 aa14.22□□□□□ -0.13
CHD8-206ENST00000553870 ADGRL2O95490 1459 aa14.22□□□□□ -0.13
CHD8-206ENST00000553870 CROCC2H7BZ55 1655 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms