RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 ABCA9Q8IUA7 1624 aa26.46■■□□□ 1.83
PSEN1-206ENST00000553447 MAPKBP1O60336 1514 aa26.44■■□□□ 1.82
PSEN1-206ENST00000553447 ZNF644Q9H582 1327 aaPredicted RBP26.42■■□□□ 1.82
PSEN1-206ENST00000553447 PTPRKQ15262 1439 aa26.42■■□□□ 1.82
PSEN1-206ENST00000553447 ARHGAP5Q13017 1502 aa26.41■■□□□ 1.82
PSEN1-206ENST00000553447 SAMD9LQ8IVG5 1584 aa26.41■■□□□ 1.82
PSEN1-206ENST00000553447 CROCC2H7BZ55 1655 aa26.4■■□□□ 1.82
PSEN1-206ENST00000553447 ZNF777Q9ULD5 760 aaPredicted RBP26.39■■□□□ 1.82
PSEN1-206ENST00000553447 ARAP3Q8WWN8 1544 aa26.39■■□□□ 1.81
PSEN1-206ENST00000553447 PLCH2O75038 1416 aa26.39■■□□□ 1.81
PSEN1-206ENST00000553447 DAPK1P53355 1430 aa26.39■■□□□ 1.81
PSEN1-206ENST00000553447 ABCC5O15440 1437 aa26.36■■□□□ 1.81
PSEN1-206ENST00000553447 ARHGEF5Q12774 1597 aa26.34■■□□□ 1.81
PSEN1-206ENST00000553447 SETD5Q9C0A6 1442 aa26.32■■□□□ 1.8
PSEN1-206ENST00000553447 ADGBQ8N7X0 1667 aa26.32■■□□□ 1.8
PSEN1-206ENST00000553447 GCC2Q8IWJ2 1684 aa26.31■■□□□ 1.8
PSEN1-206ENST00000553447 AKNAQ7Z591 1439 aa26.3■■□□□ 1.8
PSEN1-206ENST00000553447 PLEKHH2Q8IVE3 1493 aa26.3■■□□□ 1.8
PSEN1-206ENST00000553447 HFM1A2PYH4 1435 aa26.29■■□□□ 1.8
PSEN1-206ENST00000553447 RAB3GAP2Q9H2M9 1393 aa26.27■■□□□ 1.8
PSEN1-206ENST00000553447 MBD5Q9P267 1494 aa26.27■■□□□ 1.8
PSEN1-206ENST00000553447 SYCP2Q9BX26 1530 aa26.27■■□□□ 1.8
PSEN1-206ENST00000553447 EFCAB2Q5VUJ9 269 aa26.26■■□□□ 1.79
PSEN1-206ENST00000553447 ABCC1P33527 1531 aa26.25■■□□□ 1.79
PSEN1-206ENST00000553447 SHANK2Q9UPX8 1470 aa26.25■■□□□ 1.79
PSEN1-206ENST00000553447 KIAA1107Q9UPP5 1409 aa26.25■■□□□ 1.79
PSEN1-206ENST00000553447 ROCK1Q13464 1354 aa26.25■■□□□ 1.79
PSEN1-206ENST00000553447 GLI2P10070 1586 aa26.24■■□□□ 1.79
PSEN1-206ENST00000553447 NAIPQ13075 1403 aa26.24■■□□□ 1.79
PSEN1-206ENST00000553447 CHIC2Q9UKJ5 165 aa26.24■■□□□ 1.79
PSEN1-206ENST00000553447 CCDC141Q6ZP82 1450 aa26.23■■□□□ 1.79
PSEN1-206ENST00000553447 CCER1Q8TC90 406 aaPredicted RBP26.22■■□□□ 1.79
PSEN1-206ENST00000553447 FANCAO15360 1455 aa26.22■■□□□ 1.79
PSEN1-206ENST00000553447 ADGRL2O95490 1459 aa26.22■■□□□ 1.79
PSEN1-206ENST00000553447 HNRNPMP52272 730 aaKnown RBP eCLIP26.21■■□□□ 1.79
PSEN1-206ENST00000553447 MAP3K4Q9Y6R4 1608 aa26.21■■□□□ 1.79
PSEN1-206ENST00000553447 CFAP74Q9C0B2 1584 aa26.2■■□□□ 1.79
PSEN1-206ENST00000553447 DIP2BQ9P265 1576 aa26.2■■□□□ 1.79
PSEN1-206ENST00000553447 HRCP23327 699 aa26.2■■□□□ 1.78
PSEN1-206ENST00000553447 CD109Q6YHK3 1445 aa26.2■■□□□ 1.78
PSEN1-206ENST00000553447 RSPH4AQ5TD94 716 aa26.19■■□□□ 1.78
PSEN1-206ENST00000553447 ARHGEF12Q9NZN5 1544 aa26.19■■□□□ 1.78
PSEN1-206ENST00000553447 MAST1Q9Y2H9 1570 aa26.18■■□□□ 1.78
PSEN1-206ENST00000553447 C9orf84Q5VXU9 1444 aa26.17■■□□□ 1.78
PSEN1-206ENST00000553447 RRP7BPQ9NSQ0 103 aa26.17■■□□□ 1.78
PSEN1-206ENST00000553447 NCOA1Q15788 1441 aa26.14■■□□□ 1.77
PSEN1-206ENST00000553447 DHX57Q6P158 1386 aaKnown RBP26.12■■□□□ 1.77
PSEN1-206ENST00000553447 ANKRD30AQ9BXX3 1397 aa26.12■■□□□ 1.77
PSEN1-206ENST00000553447 TSPY4P0CV99 314 aa26.12■■□□□ 1.77
PSEN1-206ENST00000553447 TSPY10P0CW01 314 aa26.12■■□□□ 1.77
PSEN1-206ENST00000553447 KDM6BO15054 1643 aa26.12■■□□□ 1.77
PSEN1-206ENST00000553447 ADGRL1O94910 1474 aa26.11■■□□□ 1.77
PSEN1-206ENST00000553447 KIF13AQ9H1H9 1805 aa26.09■■□□□ 1.77
PSEN1-206ENST00000553447 TRAPPC8Q9Y2L5 1435 aa26.08■■□□□ 1.77
PSEN1-206ENST00000553447 PLXNC1O60486 1568 aa26.07■■□□□ 1.76
PSEN1-206ENST00000553447 NEO1Q92859 1461 aa26.06■■□□□ 1.76
PSEN1-206ENST00000553447 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
PSEN1-206ENST00000553447 SCAPERQ9BY12 1400 aa26.05■■□□□ 1.76
PSEN1-206ENST00000553447 FAM69CQ0P6D2 419 aa26.04■■□□□ 1.76
PSEN1-206ENST00000553447 PPRC1Q5VV67 1664 aaKnown RBP26.03■■□□□ 1.76
PSEN1-206ENST00000553447 DNAJC5Q9H3Z4 198 aa26.02■■□□□ 1.76
PSEN1-206ENST00000553447 TSPOAP1O95153 1857 aa26.02■■□□□ 1.76
PSEN1-206ENST00000553447 INO80Q9ULG1 1556 aaPredicted RBP25.99■■□□□ 1.75
PSEN1-206ENST00000553447 ZFYVE16Q7Z3T8 1539 aa25.99■■□□□ 1.75
PSEN1-206ENST00000553447 KIF15Q9NS87 1388 aa25.99■■□□□ 1.75
PSEN1-206ENST00000553447 RTEL1-TNFRSF6BF6WH68 1400 aa25.98■■□□□ 1.75
PSEN1-206ENST00000553447 ACIN1Q9UKV3 1341 aaKnown RBP25.98■■□□□ 1.75
PSEN1-206ENST00000553447 ANKRD50Q9ULJ7 1429 aa25.97■■□□□ 1.75
PSEN1-206ENST00000553447 CLSPNQ9HAW4 1339 aa25.97■■□□□ 1.75
PSEN1-206ENST00000553447 AFAP1Q8N556 730 aa25.96■■□□□ 1.75
PSEN1-206ENST00000553447 ZNF518AQ6AHZ1 1483 aa25.96■■□□□ 1.75
PSEN1-206ENST00000553447 SPAG9O60271 1321 aaKnown RBP25.95■■□□□ 1.75
PSEN1-206ENST00000553447 ATP7AQ04656 1500 aa25.95■■□□□ 1.74
PSEN1-206ENST00000553447 POGZQ7Z3K3 1410 aa25.95■■□□□ 1.74
PSEN1-206ENST00000553447 KDM5CP41229 1560 aa25.94■■□□□ 1.74
PSEN1-206ENST00000553447 DUOX2Q9NRD8 1548 aa25.93■■□□□ 1.74
PSEN1-206ENST00000553447 TEX14Q8IWB6 1497 aa25.92■■□□□ 1.74
PSEN1-206ENST00000553447 RICTORQ6R327 1708 aa25.91■■□□□ 1.74
PSEN1-206ENST00000553447 KIDINS220Q9ULH0 1771 aa25.9■■□□□ 1.74
PSEN1-206ENST00000553447 DENND4BO75064 1496 aaPredicted RBP25.89■■□□□ 1.73
PSEN1-206ENST00000553447 TRIM52Q96A61 297 aa25.88■■□□□ 1.73
PSEN1-206ENST00000553447 HECW2Q9P2P5 1572 aa25.87■■□□□ 1.73
PSEN1-206ENST00000553447 ERBINQ96RT1 1412 aa25.86■■□□□ 1.73
PSEN1-206ENST00000553447 UNC13BO14795 1591 aa25.84■■□□□ 1.73
PSEN1-206ENST00000553447 MLH3Q9UHC1 1453 aa25.84■■□□□ 1.73
PSEN1-206ENST00000553447 KDM5DQ9BY66 1539 aa25.83■■□□□ 1.72
PSEN1-206ENST00000553447 FRMPD1Q5SYB0 1578 aa25.82■■□□□ 1.72
PSEN1-206ENST00000553447 PZPP20742 1482 aa25.81■■□□□ 1.72
PSEN1-206ENST00000553447 MPHOSPH9Q99550 1183 aa25.79■■□□□ 1.72
PSEN1-206ENST00000553447 MYT1LQ9UL68 1186 aa25.78■■□□□ 1.72
PSEN1-206ENST00000553447 ABCA6Q8N139 1617 aa25.77■■□□□ 1.72
PSEN1-206ENST00000553447 EIF2AK4Q9P2K8 1649 aaKnown RBP25.77■■□□□ 1.72
PSEN1-206ENST00000553447 ZMYM4Q5VZL5 1548 aa25.77■■□□□ 1.72
PSEN1-206ENST00000553447 RAPGEF3O95398 923 aa25.76■■□□□ 1.71
PSEN1-206ENST00000553447 MAGI2Q86UL8 1455 aa25.74■■□□□ 1.71
PSEN1-206ENST00000553447 DEPDC5O75140 1603 aa25.74■■□□□ 1.71
PSEN1-206ENST00000553447 NUP155O75694 1391 aa25.73■■□□□ 1.71
PSEN1-206ENST00000553447 IQGAP3Q86VI3 1631 aa25.73■■□□□ 1.71
PSEN1-206ENST00000553447 DHX29Q7Z478 1369 aaKnown RBP25.72■■□□□ 1.71
PSEN1-206ENST00000553447 DIP2CQ9Y2E4 1556 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms