RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 LOC105371045A0A1W2PR82 267 aa21.03■□□□□ 0.96
HNRNPC-205ENST00000553300 ZMYM4Q5VZL5 1548 aa21.03■□□□□ 0.96
HNRNPC-205ENST00000553300 POGZQ7Z3K3 1410 aa21.01■□□□□ 0.95
HNRNPC-205ENST00000553300 ARHGEF40Q8TER5 1519 aa20.99■□□□□ 0.95
HNRNPC-205ENST00000553300 CDC42BPBQ9Y5S2 1711 aa20.98■□□□□ 0.95
HNRNPC-205ENST00000553300 PREX2Q70Z35 1606 aa20.98■□□□□ 0.95
HNRNPC-205ENST00000553300 MTUS2Q5JR59 1369 aa20.97■□□□□ 0.95
HNRNPC-205ENST00000553300 ZNF518AQ6AHZ1 1483 aa20.96■□□□□ 0.95
HNRNPC-205ENST00000553300 ARID4BQ4LE39 1312 aaPredicted RBP20.96■□□□□ 0.95
HNRNPC-205ENST00000553300 ZFYVE16Q7Z3T8 1539 aa20.96■□□□□ 0.95
HNRNPC-205ENST00000553300 CDC42BPAQ5VT25 1732 aa20.93■□□□□ 0.94
HNRNPC-205ENST00000553300 YEATS2Q9ULM3 1422 aa20.92■□□□□ 0.94
HNRNPC-205ENST00000553300 AFAP1Q8N556 730 aa20.91■□□□□ 0.94
HNRNPC-205ENST00000553300 GPATCH8Q9UKJ3 1502 aaKnown RBP20.91■□□□□ 0.94
HNRNPC-205ENST00000553300 ADAMTSL3P82987 1691 aa20.9■□□□□ 0.94
HNRNPC-205ENST00000553300 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.94
HNRNPC-205ENST00000553300 EHBP1L1Q8N3D4 1523 aa20.89■□□□□ 0.94
HNRNPC-205ENST00000553300 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.93
HNRNPC-205ENST00000553300 KDM5CP41229 1560 aa20.89■□□□□ 0.93
HNRNPC-205ENST00000553300 BCORL1Q5H9F3 1711 aa20.89■□□□□ 0.93
HNRNPC-205ENST00000553300 ATP10AO60312 1499 aa20.89■□□□□ 0.93
HNRNPC-205ENST00000553300 ABCC1P33527 1531 aa20.88■□□□□ 0.93
HNRNPC-205ENST00000553300 CFDP1Q9UEE9 299 aaPredicted RBP20.87■□□□□ 0.93
HNRNPC-205ENST00000553300 MYT1LQ9UL68 1186 aa20.86■□□□□ 0.93
HNRNPC-205ENST00000553300 ZNF777Q9ULD5 760 aaPredicted RBP20.86■□□□□ 0.93
HNRNPC-205ENST00000553300 MLH3Q9UHC1 1453 aa20.86■□□□□ 0.93
HNRNPC-205ENST00000553300 C9orf84Q5VXU9 1444 aa20.85■□□□□ 0.93
HNRNPC-205ENST00000553300 PLEKHH2Q8IVE3 1493 aa20.85■□□□□ 0.93
HNRNPC-205ENST00000553300 ARHGEF12Q9NZN5 1544 aa20.84■□□□□ 0.93
HNRNPC-205ENST00000553300 HECW2Q9P2P5 1572 aa20.84■□□□□ 0.93
HNRNPC-205ENST00000553300 ITSN2Q9NZM3 1697 aa20.84■□□□□ 0.93
HNRNPC-205ENST00000553300 KIAA1107Q9UPP5 1409 aa20.83■□□□□ 0.93
HNRNPC-205ENST00000553300 TRAPPC8Q9Y2L5 1435 aa20.83■□□□□ 0.93
HNRNPC-205ENST00000553300 PTPRMP28827 1452 aa20.82■□□□□ 0.92
HNRNPC-205ENST00000553300 TIAM1Q13009 1591 aa20.81■□□□□ 0.92
HNRNPC-205ENST00000553300 SAMD9LQ8IVG5 1584 aa20.81■□□□□ 0.92
HNRNPC-205ENST00000553300 MADDQ8WXG6 1647 aa20.8■□□□□ 0.92
HNRNPC-205ENST00000553300 MAP3K1Q13233 1512 aa20.78■□□□□ 0.92
HNRNPC-205ENST00000553300 SUPT6HQ7KZ85 1726 aaKnown RBP20.78■□□□□ 0.92
HNRNPC-205ENST00000553300 HNRNPMP52272 730 aaKnown RBP eCLIP20.78■□□□□ 0.925e-7■■■■□ 19.9
HNRNPC-205ENST00000553300 REREQ9P2R6 1566 aa20.78■□□□□ 0.92
HNRNPC-205ENST00000553300 SIGLEC1Q9BZZ2 1709 aa20.77■□□□□ 0.91
HNRNPC-205ENST00000553300 DIP2CQ9Y2E4 1556 aa20.76■□□□□ 0.91
HNRNPC-205ENST00000553300 SYCP2Q9BX26 1530 aa20.76■□□□□ 0.91
HNRNPC-205ENST00000553300 NCOA2Q15596 1464 aa20.76■□□□□ 0.91
HNRNPC-205ENST00000553300 SPAG9O60271 1321 aaKnown RBP20.75■□□□□ 0.91
HNRNPC-205ENST00000553300 MLECQ14165 292 aa20.75■□□□□ 0.91
HNRNPC-205ENST00000553300 LRRC9Q6ZRR7 1453 aa20.74■□□□□ 0.91
HNRNPC-205ENST00000553300 KIDINS220Q9ULH0 1771 aa20.73■□□□□ 0.91
HNRNPC-205ENST00000553300 ABCA6Q8N139 1617 aa20.73■□□□□ 0.91
HNRNPC-205ENST00000553300 RIMS1Q86UR5 1692 aaKnown RBP20.72■□□□□ 0.91
HNRNPC-205ENST00000553300 APLP2Q06481 763 aa20.72■□□□□ 0.91
HNRNPC-205ENST00000553300 AGLP35573 1532 aa20.71■□□□□ 0.91
HNRNPC-205ENST00000553300 RSPH4AQ5TD94 716 aa20.71■□□□□ 0.91
HNRNPC-205ENST00000553300 FER1L4A9Z1Z3 1794 aa20.69■□□□□ 0.9
HNRNPC-205ENST00000553300 ZNF644Q9H582 1327 aaPredicted RBP20.69■□□□□ 0.9
HNRNPC-205ENST00000553300 MBD5Q9P267 1494 aa20.68■□□□□ 0.9
HNRNPC-205ENST00000553300 ATP7AQ04656 1500 aa20.67■□□□□ 0.9
HNRNPC-205ENST00000553300 KANK4Q5T7N3 995 aaPredicted RBP20.66■□□□□ 0.9
HNRNPC-205ENST00000553300 INO80Q9ULG1 1556 aaPredicted RBP20.64■□□□□ 0.9
HNRNPC-205ENST00000553300 RTEL1-TNFRSF6BF6WH68 1400 aa20.64■□□□□ 0.9
HNRNPC-205ENST00000553300 ESF1Q9H501 851 aaKnown RBP20.64■□□□□ 0.89
HNRNPC-205ENST00000553300 CAMSAP2Q08AD1 1489 aa20.62■□□□□ 0.89
HNRNPC-205ENST00000553300 CCDC141Q6ZP82 1450 aa20.61■□□□□ 0.89
HNRNPC-205ENST00000553300 MIA2Q96PC5 1412 aa20.6■□□□□ 0.89
HNRNPC-205ENST00000553300 A2MP01023 1474 aa20.6■□□□□ 0.89
HNRNPC-205ENST00000553300 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
HNRNPC-205ENST00000553300 TSPY4P0CV99 314 aa20.59■□□□□ 0.89
HNRNPC-205ENST00000553300 TSPY10P0CW01 314 aa20.59■□□□□ 0.89
HNRNPC-205ENST00000553300 CNTLNQ9NXG0 1405 aa20.58■□□□□ 0.89
HNRNPC-205ENST00000553300 ADGBQ8N7X0 1667 aa20.58■□□□□ 0.89
HNRNPC-205ENST00000553300 MYOM3Q5VTT5 1437 aa20.58■□□□□ 0.88
HNRNPC-205ENST00000553300 ARHGEF5Q12774 1597 aa20.58■□□□□ 0.88
HNRNPC-205ENST00000553300 PLXNC1O60486 1568 aa20.57■□□□□ 0.88
HNRNPC-205ENST00000553300 LMTK3Q96Q04 1460 aa20.57■□□□□ 0.88
HNRNPC-205ENST00000553300 PPP6R1Q9UPN7 881 aa20.56■□□□□ 0.88
HNRNPC-205ENST00000553300 SETD1BQ9UPS6 1966 aaKnown RBP20.56■□□□□ 0.88
HNRNPC-205ENST00000553300 DHX29Q7Z478 1369 aaKnown RBP20.54■□□□□ 0.88
HNRNPC-205ENST00000553300 CEBPAP49715 358 aaPredicted RBP20.54■□□□□ 0.88
HNRNPC-205ENST00000553300 GGT6Q6P531 493 aa20.49■□□□□ 0.87
HNRNPC-205ENST00000553300 C3P01024 1663 aa20.48■□□□□ 0.87
HNRNPC-205ENST00000553300 PREX1Q8TCU6 1659 aa20.48■□□□□ 0.87
HNRNPC-205ENST00000553300 MROH2AA6NES4 1674 aa20.48■□□□□ 0.87
HNRNPC-205ENST00000553300 ZMYM3Q14202 1370 aa20.46■□□□□ 0.87
HNRNPC-205ENST00000553300 UHRF1BP1Q6BDS2 1440 aa20.46■□□□□ 0.87
HNRNPC-205ENST00000553300 MAST1Q9Y2H9 1570 aa20.46■□□□□ 0.87
HNRNPC-205ENST00000553300 KIF3BO15066 747 aa20.45■□□□□ 0.86
HNRNPC-205ENST00000553300 HSPA2P54652 639 aa20.45■□□□□ 0.86
HNRNPC-205ENST00000553300 NPATQ14207 1427 aa20.43■□□□□ 0.86
HNRNPC-205ENST00000553300 FGD6Q6ZV73 1430 aa20.43■□□□□ 0.86
HNRNPC-205ENST00000553300 PTPN23Q9H3S7 1636 aa20.42■□□□□ 0.86
HNRNPC-205ENST00000553300 CLTCQ00610 1675 aaKnown RBP20.41■□□□□ 0.86
HNRNPC-205ENST00000553300 FAM135AQ9P2D6 1515 aa20.4■□□□□ 0.86
HNRNPC-205ENST00000553300 TCOF1Q13428 1488 aaKnown RBP20.39■□□□□ 0.85
HNRNPC-205ENST00000553300 SHANK2Q9UPX8 1470 aa20.38■□□□□ 0.85
HNRNPC-205ENST00000553300 ABCC5O15440 1437 aa20.37■□□□□ 0.85
HNRNPC-205ENST00000553300 WASHC2CQ9Y4E1 1318 aa20.36■□□□□ 0.85
HNRNPC-205ENST00000553300 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
HNRNPC-205ENST00000553300 DAPK1P53355 1430 aa20.34■□□□□ 0.85
HNRNPC-205ENST00000553300 DUOX2Q9NRD8 1548 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms