RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.71□□□□□ -0.054e-6■■■□□ 17.3
CDK4-211ENST00000552254 POGZQ7Z3K3 1410 aa14.71□□□□□ -0.05
CDK4-211ENST00000552254 TTC37Q6PGP7 1564 aa14.71□□□□□ -0.05
CDK4-211ENST00000552254 FER1L4A9Z1Z3 1794 aa14.7□□□□□ -0.06
CDK4-211ENST00000552254 FANCAO15360 1455 aa14.69□□□□□ -0.06
CDK4-211ENST00000552254 CASKIN1Q8WXD9 1431 aa14.69□□□□□ -0.06
CDK4-211ENST00000552254 PREX1Q8TCU6 1659 aa14.65□□□□□ -0.06
CDK4-211ENST00000552254 CFAP74Q9C0B2 1584 aa14.65□□□□□ -0.06
CDK4-211ENST00000552254 FYCO1Q9BQS8 1478 aa14.65□□□□□ -0.06
CDK4-211ENST00000552254 AKNAQ7Z591 1439 aa14.65□□□□□ -0.06
CDK4-211ENST00000552254 DENND4BO75064 1496 aaPredicted RBP14.64□□□□□ -0.07
CDK4-211ENST00000552254 RICTORQ6R327 1708 aa14.64□□□□□ -0.07
CDK4-211ENST00000552254 KIF14Q15058 1648 aa14.64□□□□□ -0.07
CDK4-211ENST00000552254 MLECQ14165 292 aa14.64□□□□□ -0.07
CDK4-211ENST00000552254 ZFYVE16Q7Z3T8 1539 aa14.62□□□□□ -0.07
CDK4-211ENST00000552254 CCDC18Q5T9S5 1454 aa14.62□□□□□ -0.07
CDK4-211ENST00000552254 MYO5CQ9NQX4 1742 aa14.61□□□□□ -0.07
CDK4-211ENST00000552254 CDK11AQ9UQ88 783 aaPredicted RBP14.59□□□□□ -0.07
CDK4-211ENST00000552254 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
CDK4-211ENST00000552254 MED1Q15648 1581 aaPredicted RBP14.59□□□□□ -0.07
CDK4-211ENST00000552254 PLCH2O75038 1416 aa14.58□□□□□ -0.07
CDK4-211ENST00000552254 TROQ12816 1431 aaPredicted RBP14.58□□□□□ -0.08
CDK4-211ENST00000552254 SIGLEC1Q9BZZ2 1709 aa14.57□□□□□ -0.08
CDK4-211ENST00000552254 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
CDK4-211ENST00000552254 YEATS2Q9ULM3 1422 aa14.57□□□□□ -0.08
CDK4-211ENST00000552254 IQSEC2Q5JU85 1478 aa14.57□□□□□ -0.08
CDK4-211ENST00000552254 ZMYM4Q5VZL5 1548 aa14.56□□□□□ -0.08
CDK4-211ENST00000552254 SCAPERQ9BY12 1400 aa14.55□□□□□ -0.08
CDK4-211ENST00000552254 CDC42BPBQ9Y5S2 1711 aa14.54□□□□□ -0.08
CDK4-211ENST00000552254 STRCQ7RTU9 1775 aa14.54□□□□□ -0.08
CDK4-211ENST00000552254 UHRF1BP1Q6BDS2 1440 aa14.53□□□□□ -0.08
CDK4-211ENST00000552254 ARHGAP5Q13017 1502 aa14.52□□□□□ -0.08
CDK4-211ENST00000552254 EFCAB2Q5VUJ9 269 aa14.52□□□□□ -0.09
CDK4-211ENST00000552254 MAGI2Q86UL8 1455 aa14.51□□□□□ -0.09
CDK4-211ENST00000552254 TIAM1Q13009 1591 aa14.49□□□□□ -0.09
CDK4-211ENST00000552254 ARHGEF12Q9NZN5 1544 aa14.49□□□□□ -0.09
CDK4-211ENST00000552254 CDC42BPAQ5VT25 1732 aa14.49□□□□□ -0.09
CDK4-211ENST00000552254 PREX2Q70Z35 1606 aa14.48□□□□□ -0.09
CDK4-211ENST00000552254 CEBPAP49715 358 aaPredicted RBP14.48□□□□□ -0.09
CDK4-211ENST00000552254 AFAP1Q8N556 730 aa14.47□□□□□ -0.09
CDK4-211ENST00000552254 C9orf84Q5VXU9 1444 aa14.47□□□□□ -0.09
CDK4-211ENST00000552254 MTUS2Q5JR59 1369 aa14.46□□□□□ -0.1
CDK4-211ENST00000552254 MAP3K1Q13233 1512 aa14.46□□□□□ -0.1
CDK4-211ENST00000552254 EHBP1L1Q8N3D4 1523 aa14.46□□□□□ -0.1
CDK4-211ENST00000552254 PTPRTO14522 1441 aa14.45□□□□□ -0.1
CDK4-211ENST00000552254 MYT1LQ9UL68 1186 aa14.45□□□□□ -0.1
CDK4-211ENST00000552254 ATP10AO60312 1499 aa14.44□□□□□ -0.1
CDK4-211ENST00000552254 ITSN2Q9NZM3 1697 aa14.43□□□□□ -0.1
CDK4-211ENST00000552254 LTBP4Q8N2S1 1624 aa14.43□□□□□ -0.1
CDK4-211ENST00000552254 ZNF518AQ6AHZ1 1483 aa14.43□□□□□ -0.1
CDK4-211ENST00000552254 SRCAPQ6ZRS2 3230 aa14.43□□□□□ -0.1
CDK4-211ENST00000552254 TRAPPC8Q9Y2L5 1435 aa14.42□□□□□ -0.1
CDK4-211ENST00000552254 ABCC1P33527 1531 aa14.42□□□□□ -0.1
CDK4-211ENST00000552254 SETD1BQ9UPS6 1966 aaKnown RBP14.42□□□□□ -0.1
CDK4-211ENST00000552254 SUPT6HQ7KZ85 1726 aaKnown RBP14.42□□□□□ -0.1
CDK4-211ENST00000552254 ESF1Q9H501 851 aaKnown RBP14.42□□□□□ -0.1
CDK4-211ENST00000552254 ZNF777Q9ULD5 760 aaPredicted RBP14.42□□□□□ -0.1
CDK4-211ENST00000552254 KDM5CP41229 1560 aa14.42□□□□□ -0.1
CDK4-211ENST00000552254 LRRC9Q6ZRR7 1453 aa14.41□□□□□ -0.1
CDK4-211ENST00000552254 C3P01024 1663 aa14.41□□□□□ -0.1
CDK4-211ENST00000552254 ABCA6Q8N139 1617 aa14.4□□□□□ -0.1
CDK4-211ENST00000552254 GPATCH8Q9UKJ3 1502 aaKnown RBP14.4□□□□□ -0.1
CDK4-211ENST00000552254 SAMD9LQ8IVG5 1584 aa14.39□□□□□ -0.11
CDK4-211ENST00000552254 DIP2CQ9Y2E4 1556 aa14.39□□□□□ -0.11
CDK4-211ENST00000552254 UBAP1LF5GYI3 381 aa14.39□□□□□ -0.11
CDK4-211ENST00000552254 APLP2Q06481 763 aa14.38□□□□□ -0.11
CDK4-211ENST00000552254 KANK4Q5T7N3 995 aaPredicted RBP14.38□□□□□ -0.11
CDK4-211ENST00000552254 CCNB3Q8WWL7 1395 aa14.37□□□□□ -0.11
CDK4-211ENST00000552254 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
CDK4-211ENST00000552254 NCOA2Q15596 1464 aa14.37□□□□□ -0.11
CDK4-211ENST00000552254 KIDINS220Q9ULH0 1771 aa14.37□□□□□ -0.11
CDK4-211ENST00000552254 SYCP2Q9BX26 1530 aa14.36□□□□□ -0.11
CDK4-211ENST00000552254 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
CDK4-211ENST00000552254 HNRNPMP52272 730 aaKnown RBP eCLIP14.35□□□□□ -0.11
CDK4-211ENST00000552254 MLH3Q9UHC1 1453 aa14.35□□□□□ -0.11
CDK4-211ENST00000552254 NCOA1Q15788 1441 aa14.33□□□□□ -0.11
CDK4-211ENST00000552254 CFDP1Q9UEE9 299 aaPredicted RBP14.33□□□□□ -0.12
CDK4-211ENST00000552254 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.12
CDK4-211ENST00000552254 REREQ9P2R6 1566 aa14.31□□□□□ -0.12
CDK4-211ENST00000552254 ZNF644Q9H582 1327 aaPredicted RBP14.31□□□□□ -0.12
CDK4-211ENST00000552254 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
CDK4-211ENST00000552254 ZNF335Q9H4Z2 1342 aaPredicted RBP14.28□□□□□ -0.12
CDK4-211ENST00000552254 AGLP35573 1532 aa14.27□□□□□ -0.12
CDK4-211ENST00000552254 ATP7AQ04656 1500 aa14.27□□□□□ -0.12
CDK4-211ENST00000552254 PLEKHH2Q8IVE3 1493 aa14.27□□□□□ -0.12
CDK4-211ENST00000552254 INO80Q9ULG1 1556 aaPredicted RBP14.26□□□□□ -0.13
CDK4-211ENST00000552254 CNTLNQ9NXG0 1405 aa14.26□□□□□ -0.13
CDK4-211ENST00000552254 KIAA1107Q9UPP5 1409 aa14.26□□□□□ -0.13
CDK4-211ENST00000552254 MYOM3Q5VTT5 1437 aa14.25□□□□□ -0.13
CDK4-211ENST00000552254 NCKAP5LQ9HCH0 1330 aa14.25□□□□□ -0.13
CDK4-211ENST00000552254 PIP4K2BP78356 416 aa14.25□□□□□ -0.13
CDK4-211ENST00000552254 CAMSAP2Q08AD1 1489 aa14.25□□□□□ -0.13
CDK4-211ENST00000552254 MROH2AA6NES4 1674 aa14.23□□□□□ -0.13
CDK4-211ENST00000552254 MBD5Q9P267 1494 aa14.23□□□□□ -0.13
CDK4-211ENST00000552254 MIA2Q96PC5 1412 aa14.23□□□□□ -0.13
CDK4-211ENST00000552254 MYO3AQ8NEV4 1616 aa14.23□□□□□ -0.13
CDK4-211ENST00000552254 HSPA1LP34931 641 aa14.22□□□□□ -0.13
CDK4-211ENST00000552254 ZNF142P52746 1687 aaPredicted RBP14.21□□□□□ -0.13
CDK4-211ENST00000552254 A2MP01023 1474 aa14.21□□□□□ -0.13
CDK4-211ENST00000552254 NPATQ14207 1427 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms