RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 FRMPD1Q5SYB0 1578 aa25.87■■□□□ 1.73
GCN1-209ENST00000551920 GPATCH8Q9UKJ3 1502 aaKnown RBP25.86■■□□□ 1.73
GCN1-209ENST00000551920 KANK4Q5T7N3 995 aaPredicted RBP25.85■■□□□ 1.73
GCN1-209ENST00000551920 NCOA2Q15596 1464 aa25.83■■□□□ 1.73
GCN1-209ENST00000551920 ADGRL1O94910 1474 aa25.82■■□□□ 1.72
GCN1-209ENST00000551920 SUPT6HQ7KZ85 1726 aaKnown RBP25.82■■□□□ 1.72
GCN1-209ENST00000551920 RAPGEF3O95398 923 aa25.79■■□□□ 1.72
GCN1-209ENST00000551920 EFCAB2Q5VUJ9 269 aa25.79■■□□□ 1.72
GCN1-209ENST00000551920 RICTORQ6R327 1708 aa25.79■■□□□ 1.72
GCN1-209ENST00000551920 CCNB3Q8WWL7 1395 aa25.79■■□□□ 1.72
GCN1-209ENST00000551920 DENND4BO75064 1496 aaPredicted RBP25.79■■□□□ 1.72
GCN1-209ENST00000551920 ABCC1P33527 1531 aa25.77■■□□□ 1.72
GCN1-209ENST00000551920 POGZQ7Z3K3 1410 aa25.76■■□□□ 1.71
GCN1-209ENST00000551920 SCAPERQ9BY12 1400 aa25.76■■□□□ 1.71
GCN1-209ENST00000551920 SAMD9LQ8IVG5 1584 aa25.76■■□□□ 1.71
GCN1-209ENST00000551920 ARHGEF12Q9NZN5 1544 aa25.74■■□□□ 1.71
GCN1-209ENST00000551920 ITSN2Q9NZM3 1697 aa25.74■■□□□ 1.71
GCN1-209ENST00000551920 ZMYM4Q5VZL5 1548 aa25.72■■□□□ 1.71
GCN1-209ENST00000551920 APLP2Q06481 763 aa25.71■■□□□ 1.71
GCN1-209ENST00000551920 CFDP1Q9UEE9 299 aaPredicted RBP25.68■■□□□ 1.7
GCN1-209ENST00000551920 SYCP2Q9BX26 1530 aa25.68■■□□□ 1.7
GCN1-209ENST00000551920 KDM5CP41229 1560 aa25.66■■□□□ 1.7
GCN1-209ENST00000551920 TRAPPC8Q9Y2L5 1435 aa25.66■■□□□ 1.7
GCN1-209ENST00000551920 ZNF518AQ6AHZ1 1483 aa25.66■■□□□ 1.7
GCN1-209ENST00000551920 ARHGEF40Q8TER5 1519 aa25.65■■□□□ 1.7
GCN1-209ENST00000551920 ZNF777Q9ULD5 760 aaPredicted RBP25.65■■□□□ 1.7
GCN1-209ENST00000551920 ZNF644Q9H582 1327 aaPredicted RBP25.64■■□□□ 1.7
GCN1-209ENST00000551920 MYOM3Q5VTT5 1437 aa25.62■■□□□ 1.69
GCN1-209ENST00000551920 YEATS2Q9ULM3 1422 aa25.62■■□□□ 1.69
GCN1-209ENST00000551920 KIAA1107Q9UPP5 1409 aa25.62■■□□□ 1.69
GCN1-209ENST00000551920 CAMSAP2Q08AD1 1489 aa25.6■■□□□ 1.69
GCN1-209ENST00000551920 PLEKHH2Q8IVE3 1493 aa25.6■■□□□ 1.69
GCN1-209ENST00000551920 AFAP1Q8N556 730 aa25.6■■□□□ 1.69
GCN1-209ENST00000551920 ZFYVE16Q7Z3T8 1539 aa25.59■■□□□ 1.69
GCN1-209ENST00000551920 MAGI2Q86UL8 1455 aa25.58■■□□□ 1.69
GCN1-209ENST00000551920 MBD5Q9P267 1494 aa25.58■■□□□ 1.69
GCN1-209ENST00000551920 HECW2Q9P2P5 1572 aa25.57■■□□□ 1.68
GCN1-209ENST00000551920 HNRNPMP52272 730 aaKnown RBP eCLIP25.56■■□□□ 1.68
GCN1-209ENST00000551920 MIA2Q96PC5 1412 aa25.54■■□□□ 1.68
GCN1-209ENST00000551920 MLH3Q9UHC1 1453 aa25.53■■□□□ 1.68
GCN1-209ENST00000551920 SIGLEC1Q9BZZ2 1709 aa25.51■■□□□ 1.68
GCN1-209ENST00000551920 ABCA6Q8N139 1617 aa25.51■■□□□ 1.67
GCN1-209ENST00000551920 FGD6Q6ZV73 1430 aa25.5■■□□□ 1.67
GCN1-209ENST00000551920 DIP2CQ9Y2E4 1556 aa25.5■■□□□ 1.67
GCN1-209ENST00000551920 KIDINS220Q9ULH0 1771 aa25.49■■□□□ 1.67
GCN1-209ENST00000551920 INO80Q9ULG1 1556 aaPredicted RBP25.49■■□□□ 1.67
GCN1-209ENST00000551920 PPARGC1BQ86YN6 1023 aaKnown RBP25.47■■□□□ 1.67
GCN1-209ENST00000551920 PTPN23Q9H3S7 1636 aa25.47■■□□□ 1.67
GCN1-209ENST00000551920 ARHGEF5Q12774 1597 aa25.47■■□□□ 1.67
GCN1-209ENST00000551920 CCDC141Q6ZP82 1450 aa25.47■■□□□ 1.67
GCN1-209ENST00000551920 ATP7AQ04656 1500 aa25.46■■□□□ 1.67
GCN1-209ENST00000551920 ATP10AO60312 1499 aa25.44■■□□□ 1.66
GCN1-209ENST00000551920 TCOF1Q13428 1488 aaKnown RBP25.44■■□□□ 1.66
GCN1-209ENST00000551920 SPAG9O60271 1321 aaKnown RBP25.43■■□□□ 1.66
GCN1-209ENST00000551920 KDM4FA0A1W2PPD8 638 aa25.43■■□□□ 1.66
GCN1-209ENST00000551920 C9orf84Q5VXU9 1444 aa25.43■■□□□ 1.66
GCN1-209ENST00000551920 REREQ9P2R6 1566 aa25.4■■□□□ 1.66
GCN1-209ENST00000551920 MYT1LQ9UL68 1186 aa25.37■■□□□ 1.65
GCN1-209ENST00000551920 RTEL1-TNFRSF6BF6WH68 1400 aa25.36■■□□□ 1.65
GCN1-209ENST00000551920 BCORL1Q5H9F3 1711 aa25.35■■□□□ 1.65
GCN1-209ENST00000551920 PLXNC1O60486 1568 aa25.34■■□□□ 1.65
GCN1-209ENST00000551920 MAST1Q9Y2H9 1570 aa25.34■■□□□ 1.65
GCN1-209ENST00000551920 DNMT1P26358 1616 aaKnown RBP25.34■■□□□ 1.65
GCN1-209ENST00000551920 ABCC5O15440 1437 aa25.33■■□□□ 1.65
GCN1-209ENST00000551920 ARID4BQ4LE39 1312 aaPredicted RBP25.33■■□□□ 1.64
GCN1-209ENST00000551920 CROCC2H7BZ55 1655 aa25.32■■□□□ 1.64
GCN1-209ENST00000551920 ADAMTSL3P82987 1691 aa25.32■■□□□ 1.64
GCN1-209ENST00000551920 RSPH4AQ5TD94 716 aa25.32■■□□□ 1.64
GCN1-209ENST00000551920 AGLP35573 1532 aa25.31■■□□□ 1.64
GCN1-209ENST00000551920 DAPK1P53355 1430 aa25.3■■□□□ 1.64
GCN1-209ENST00000551920 ADGBQ8N7X0 1667 aa25.3■■□□□ 1.64
GCN1-209ENST00000551920 SHANK2Q9UPX8 1470 aa25.3■■□□□ 1.64
GCN1-209ENST00000551920 A2MP01023 1474 aa25.28■■□□□ 1.64
GCN1-209ENST00000551920 MADDQ8WXG6 1647 aa25.27■■□□□ 1.64
GCN1-209ENST00000551920 TSPY4P0CV99 314 aa25.24■■□□□ 1.63
GCN1-209ENST00000551920 TSPY10P0CW01 314 aa25.24■■□□□ 1.63
GCN1-209ENST00000551920 FAM50AQ14320 339 aaKnown RBP25.24■■□□□ 1.63
GCN1-209ENST00000551920 RRBP1Q9P2E9 1410 aaKnown RBP25.21■■□□□ 1.63
GCN1-209ENST00000551920 MLECQ14165 292 aa25.21■■□□□ 1.63
GCN1-209ENST00000551920 DHX29Q7Z478 1369 aaKnown RBP25.19■■□□□ 1.62
GCN1-209ENST00000551920 PTPRKQ15262 1439 aa25.19■■□□□ 1.62
GCN1-209ENST00000551920 RIMS1Q86UR5 1692 aaKnown RBP25.17■■□□□ 1.62
GCN1-209ENST00000551920 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.17■■□□□ 1.62
GCN1-209ENST00000551920 PTPRMP28827 1452 aa25.16■■□□□ 1.62
GCN1-209ENST00000551920 FER1L4A9Z1Z3 1794 aa25.16■■□□□ 1.62
GCN1-209ENST00000551920 ADGRL2O95490 1459 aa25.15■■□□□ 1.62
GCN1-209ENST00000551920 KIF15Q9NS87 1388 aa25.15■■□□□ 1.62
GCN1-209ENST00000551920 CHIC2Q9UKJ5 165 aa25.13■■□□□ 1.61
GCN1-209ENST00000551920 DUOX2Q9NRD8 1548 aa25.12■■□□□ 1.61
GCN1-209ENST00000551920 NCOA1Q15788 1441 aa25.12■■□□□ 1.61
GCN1-209ENST00000551920 AEBP2Q6ZN18 517 aaPredicted RBP25.11■■□□□ 1.61
GCN1-209ENST00000551920 ANKRD30AQ9BXX3 1397 aa25.09■■□□□ 1.61
GCN1-209ENST00000551920 RRP7BPQ9NSQ0 103 aa25.09■■□□□ 1.61
GCN1-209ENST00000551920 EIF2AK4Q9P2K8 1649 aaKnown RBP25.08■■□□□ 1.61
GCN1-209ENST00000551920 RNF17Q9BXT8 1623 aaKnown RBP25.07■■□□□ 1.6
GCN1-209ENST00000551920 KIF3BO15066 747 aa25.06■■□□□ 1.6
GCN1-209ENST00000551920 ERBINQ96RT1 1412 aa25.05■■□□□ 1.6
GCN1-209ENST00000551920 MROH1Q8NDA8 1641 aa25.04■■□□□ 1.6
GCN1-209ENST00000551920 ITGAEP38570 1179 aa25.03■■□□□ 1.6
GCN1-209ENST00000551920 GGT6Q6P531 493 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 237.1 ms