RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 ZMYM4Q5VZL5 1548 aa15.73■□□□□ 0.11
GCN1-208ENST00000551549 ARHGAP5Q13017 1502 aa15.72■□□□□ 0.11
GCN1-208ENST00000551549 ADAMTSL3P82987 1691 aa15.71■□□□□ 0.11
GCN1-208ENST00000551549 AFAP1Q8N556 730 aa15.71■□□□□ 0.11
GCN1-208ENST00000551549 ZFYVE16Q7Z3T8 1539 aa15.71■□□□□ 0.11
GCN1-208ENST00000551549 MYO5CQ9NQX4 1742 aa15.71■□□□□ 0.1
GCN1-208ENST00000551549 PTPRMP28827 1452 aa15.71■□□□□ 0.1
GCN1-208ENST00000551549 MAGI2Q86UL8 1455 aa15.71■□□□□ 0.1
GCN1-208ENST00000551549 HECW2Q9P2P5 1572 aa15.7■□□□□ 0.1
GCN1-208ENST00000551549 MLECQ14165 292 aa15.68■□□□□ 0.1
GCN1-208ENST00000551549 BCORL1Q5H9F3 1711 aa15.68■□□□□ 0.1
GCN1-208ENST00000551549 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
GCN1-208ENST00000551549 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
GCN1-208ENST00000551549 ATP10AO60312 1499 aa15.65■□□□□ 0.1
GCN1-208ENST00000551549 ZNF518AQ6AHZ1 1483 aa15.65■□□□□ 0.1
GCN1-208ENST00000551549 MADDQ8WXG6 1647 aa15.65■□□□□ 0.1
GCN1-208ENST00000551549 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
GCN1-208ENST00000551549 SIGLEC1Q9BZZ2 1709 aa15.64■□□□□ 0.09
GCN1-208ENST00000551549 TRAPPC8Q9Y2L5 1435 aa15.64■□□□□ 0.09
GCN1-208ENST00000551549 ARHGEF12Q9NZN5 1544 aa15.63■□□□□ 0.09
GCN1-208ENST00000551549 CDC42BPBQ9Y5S2 1711 aa15.63■□□□□ 0.09
GCN1-208ENST00000551549 PLPPR3Q6T4P5 718 aa15.63■□□□□ 0.09
GCN1-208ENST00000551549 ZNF777Q9ULD5 760 aaPredicted RBP15.63■□□□□ 0.09
GCN1-208ENST00000551549 C9orf84Q5VXU9 1444 aa15.62■□□□□ 0.09
GCN1-208ENST00000551549 PREX2Q70Z35 1606 aa15.62■□□□□ 0.09
GCN1-208ENST00000551549 GPATCH8Q9UKJ3 1502 aaKnown RBP15.62■□□□□ 0.09
GCN1-208ENST00000551549 KDM5CP41229 1560 aa15.61■□□□□ 0.09
GCN1-208ENST00000551549 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
GCN1-208ENST00000551549 ABCC1P33527 1531 aa15.6■□□□□ 0.09
GCN1-208ENST00000551549 HNRNPMP52272 730 aaKnown RBP eCLIP15.59■□□□□ 0.09
GCN1-208ENST00000551549 CFDP1Q9UEE9 299 aaPredicted RBP15.59■□□□□ 0.09
GCN1-208ENST00000551549 RIMS1Q86UR5 1692 aaKnown RBP15.59■□□□□ 0.09
GCN1-208ENST00000551549 MLH3Q9UHC1 1453 aa15.59■□□□□ 0.09
GCN1-208ENST00000551549 CCNB3Q8WWL7 1395 aa15.58■□□□□ 0.08
GCN1-208ENST00000551549 CDC42BPAQ5VT25 1732 aa15.57■□□□□ 0.08
GCN1-208ENST00000551549 DIP2CQ9Y2E4 1556 aa15.55■□□□□ 0.08
GCN1-208ENST00000551549 SAMD9LQ8IVG5 1584 aa15.54■□□□□ 0.08
GCN1-208ENST00000551549 ZNF644Q9H582 1327 aaPredicted RBP15.54■□□□□ 0.08
GCN1-208ENST00000551549 CEBPAP49715 358 aaPredicted RBP15.54■□□□□ 0.08
GCN1-208ENST00000551549 ITSN2Q9NZM3 1697 aa15.54■□□□□ 0.08
GCN1-208ENST00000551549 LMTK3Q96Q04 1460 aa15.53■□□□□ 0.08
GCN1-208ENST00000551549 SPAG9O60271 1321 aaKnown RBP15.53■□□□□ 0.08
GCN1-208ENST00000551549 ABCA6Q8N139 1617 aa15.53■□□□□ 0.08
GCN1-208ENST00000551549 SYCP2Q9BX26 1530 aa15.53■□□□□ 0.08
GCN1-208ENST00000551549 HSPA2P54652 639 aa15.52■□□□□ 0.08
GCN1-208ENST00000551549 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
GCN1-208ENST00000551549 EHBP1L1Q8N3D4 1523 aa15.51■□□□□ 0.07
GCN1-208ENST00000551549 REREQ9P2R6 1566 aa15.5■□□□□ 0.07
GCN1-208ENST00000551549 ILDR1Q86SU0 546 aaPredicted RBP15.5■□□□□ 0.07
GCN1-208ENST00000551549 PLEKHH2Q8IVE3 1493 aa15.5■□□□□ 0.07
GCN1-208ENST00000551549 FER1L4A9Z1Z3 1794 aa15.49■□□□□ 0.07
GCN1-208ENST00000551549 KIDINS220Q9ULH0 1771 aa15.49■□□□□ 0.07
GCN1-208ENST00000551549 TIAM1Q13009 1591 aa15.49■□□□□ 0.07
GCN1-208ENST00000551549 VPS8Q8N3P4 1428 aa15.48■□□□□ 0.07
GCN1-208ENST00000551549 AGLP35573 1532 aa15.48■□□□□ 0.07
GCN1-208ENST00000551549 NCOA2Q15596 1464 aa15.46■□□□□ 0.06
GCN1-208ENST00000551549 ESF1Q9H501 851 aaKnown RBP15.45■□□□□ 0.06
GCN1-208ENST00000551549 MBD5Q9P267 1494 aa15.45■□□□□ 0.06
GCN1-208ENST00000551549 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
GCN1-208ENST00000551549 KANK4Q5T7N3 995 aaPredicted RBP15.43■□□□□ 0.06
GCN1-208ENST00000551549 A2MP01023 1474 aa15.41■□□□□ 0.06
GCN1-208ENST00000551549 LRRC9Q6ZRR7 1453 aa15.41■□□□□ 0.06
GCN1-208ENST00000551549 INO80Q9ULG1 1556 aaPredicted RBP15.41■□□□□ 0.06
GCN1-208ENST00000551549 GGT6Q6P531 493 aa15.39■□□□□ 0.05
GCN1-208ENST00000551549 SUPT6HQ7KZ85 1726 aaKnown RBP15.39■□□□□ 0.05
GCN1-208ENST00000551549 CNTLNQ9NXG0 1405 aa15.38■□□□□ 0.05
GCN1-208ENST00000551549 CAMSAP2Q08AD1 1489 aa15.38■□□□□ 0.05
GCN1-208ENST00000551549 PLXNC1O60486 1568 aa15.37■□□□□ 0.05
GCN1-208ENST00000551549 RTEL1-TNFRSF6BF6WH68 1400 aa15.37■□□□□ 0.05
GCN1-208ENST00000551549 ZMYM3Q14202 1370 aa15.36■□□□□ 0.05
GCN1-208ENST00000551549 UHRF1BP1Q6BDS2 1440 aa15.36■□□□□ 0.05
GCN1-208ENST00000551549 RSPH4AQ5TD94 716 aa15.36■□□□□ 0.05
GCN1-208ENST00000551549 DHX29Q7Z478 1369 aaKnown RBP15.36■□□□□ 0.05
GCN1-208ENST00000551549 C3P01024 1663 aa15.35■□□□□ 0.05
GCN1-208ENST00000551549 CCDC141Q6ZP82 1450 aa15.35■□□□□ 0.05
GCN1-208ENST00000551549 MAP3K1Q13233 1512 aa15.35■□□□□ 0.05
GCN1-208ENST00000551549 PREX1Q8TCU6 1659 aa15.35■□□□□ 0.05
GCN1-208ENST00000551549 SETD1BQ9UPS6 1966 aaKnown RBP15.34■□□□□ 0.05
GCN1-208ENST00000551549 TSPY4P0CV99 314 aa15.32■□□□□ 0.04
GCN1-208ENST00000551549 TSPY10P0CW01 314 aa15.32■□□□□ 0.04
GCN1-208ENST00000551549 KIF3BO15066 747 aa15.31■□□□□ 0.04
GCN1-208ENST00000551549 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
GCN1-208ENST00000551549 APLP2Q06481 763 aa15.3■□□□□ 0.04
GCN1-208ENST00000551549 NPATQ14207 1427 aa15.3■□□□□ 0.04
GCN1-208ENST00000551549 ADGBQ8N7X0 1667 aa15.3■□□□□ 0.04
GCN1-208ENST00000551549 FBXO41Q8TF61 875 aa15.3■□□□□ 0.04
GCN1-208ENST00000551549 MYOM3Q5VTT5 1437 aa15.29■□□□□ 0.04
GCN1-208ENST00000551549 ARHGEF5Q12774 1597 aa15.28■□□□□ 0.04
GCN1-208ENST00000551549 DMRT2Q9Y5R5 561 aa15.28■□□□□ 0.04
GCN1-208ENST00000551549 CLTCQ00610 1675 aaKnown RBP15.28■□□□□ 0.04
GCN1-208ENST00000551549 PTPRKQ15262 1439 aa15.27■□□□□ 0.04
GCN1-208ENST00000551549 MIA2Q96PC5 1412 aa15.27■□□□□ 0.04
GCN1-208ENST00000551549 MROH2AA6NES4 1674 aa15.27■□□□□ 0.03
GCN1-208ENST00000551549 STRCQ7RTU9 1775 aa15.26■□□□□ 0.03
GCN1-208ENST00000551549 CERKQ8TCT0 537 aa15.25■□□□□ 0.03
GCN1-208ENST00000551549 WASHC2CQ9Y4E1 1318 aa15.24■□□□□ 0.03
GCN1-208ENST00000551549 FBXO31Q5XUX0 539 aaPredicted RBP15.24■□□□□ 0.03
GCN1-208ENST00000551549 NCOA1Q15788 1441 aa15.23■□□□□ 0.03
GCN1-208ENST00000551549 NCKAP5LQ9HCH0 1330 aa15.22■□□□□ 0.03
GCN1-208ENST00000551549 PTPRTO14522 1441 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms