RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 UHRF1BP1Q6BDS2 1440 aa24■■□□□ 1.43
SNRPF-203ENST00000551316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.98■■□□□ 1.436e-17■■□□□ 13.5
SNRPF-203ENST00000551316 DMRT2Q9Y5R5 561 aa23.96■■□□□ 1.43
SNRPF-203ENST00000551316 NUP153P49790 1475 aaKnown RBP23.95■■□□□ 1.42
SNRPF-203ENST00000551316 SAMD9Q5K651 1589 aa23.95■■□□□ 1.42
SNRPF-203ENST00000551316 MAGI2Q86UL8 1455 aa23.94■■□□□ 1.42
SNRPF-203ENST00000551316 SETD1BQ9UPS6 1966 aaKnown RBP23.93■■□□□ 1.42
SNRPF-203ENST00000551316 P3H3Q8IVL6 736 aa23.93■■□□□ 1.42
SNRPF-203ENST00000551316 NCOA1Q15788 1441 aa23.89■■□□□ 1.41
SNRPF-203ENST00000551316 C9orf84Q5VXU9 1444 aa23.89■■□□□ 1.41
SNRPF-203ENST00000551316 ATP10AO60312 1499 aa23.86■■□□□ 1.41
SNRPF-203ENST00000551316 UBAP1LF5GYI3 381 aa23.81■■□□□ 1.4
SNRPF-203ENST00000551316 ZNF335Q9H4Z2 1342 aaPredicted RBP23.81■■□□□ 1.4
SNRPF-203ENST00000551316 PRXQ9BXM0 1461 aa23.81■■□□□ 1.4
SNRPF-203ENST00000551316 CAMSAP1Q5T5Y3 1602 aa23.81■■□□□ 1.4
SNRPF-203ENST00000551316 DIP2CQ9Y2E4 1556 aa23.79■■□□□ 1.4
SNRPF-203ENST00000551316 SCAPERQ9BY12 1400 aa23.79■■□□□ 1.4
SNRPF-203ENST00000551316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.79■■□□□ 1.4
SNRPF-203ENST00000551316 HNRNPUL2Q1KMD3 747 aaKnown RBP23.79■■□□□ 1.4
SNRPF-203ENST00000551316 ABCA6Q8N139 1617 aa23.77■■□□□ 1.4
SNRPF-203ENST00000551316 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
SNRPF-203ENST00000551316 KDM5CP41229 1560 aa23.73■■□□□ 1.39
SNRPF-203ENST00000551316 HSPA1LP34931 641 aa23.72■■□□□ 1.39
SNRPF-203ENST00000551316 MYO5CQ9NQX4 1742 aa23.71■■□□□ 1.39
SNRPF-203ENST00000551316 REREQ9P2R6 1566 aa23.69■■□□□ 1.38
SNRPF-203ENST00000551316 SUPT6HQ7KZ85 1726 aaKnown RBP23.68■■□□□ 1.38
SNRPF-203ENST00000551316 CDK13Q14004 1512 aaKnown RBP23.68■■□□□ 1.38
SNRPF-203ENST00000551316 ZNF142P52746 1687 aaPredicted RBP23.67■■□□□ 1.38
SNRPF-203ENST00000551316 TRAPPC8Q9Y2L5 1435 aa23.67■■□□□ 1.38
SNRPF-203ENST00000551316 ALKQ9UM73 1620 aa23.66■■□□□ 1.38
SNRPF-203ENST00000551316 MYO3AQ8NEV4 1616 aa23.65■■□□□ 1.38
SNRPF-203ENST00000551316 NCKAP5LQ9HCH0 1330 aa23.64■■□□□ 1.38
SNRPF-203ENST00000551316 PLCH2O75038 1416 aa23.64■■□□□ 1.37
SNRPF-203ENST00000551316 KIF14Q15058 1648 aa23.61■■□□□ 1.37
SNRPF-203ENST00000551316 MROH2AA6NES4 1674 aa23.6■■□□□ 1.37
SNRPF-203ENST00000551316 PLEKHD1A6NEE1 506 aa23.59■■□□□ 1.37
SNRPF-203ENST00000551316 ZNF518AQ6AHZ1 1483 aa23.59■■□□□ 1.37
SNRPF-203ENST00000551316 AGLP35573 1532 aa23.59■■□□□ 1.37
SNRPF-203ENST00000551316 TCOF1Q13428 1488 aaKnown RBP23.57■■□□□ 1.36
SNRPF-203ENST00000551316 SCAF1Q9H7N4 1312 aaKnown RBP23.57■■□□□ 1.36
SNRPF-203ENST00000551316 PIP4K2BP78356 416 aa23.55■■□□□ 1.36
SNRPF-203ENST00000551316 CEP170BQ9Y4F5 1589 aaPredicted RBP23.53■■□□□ 1.36
SNRPF-203ENST00000551316 PLA2R1Q13018 1463 aa23.52■■□□□ 1.36
SNRPF-203ENST00000551316 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
SNRPF-203ENST00000551316 KIDINS220Q9ULH0 1771 aa23.51■■□□□ 1.35
SNRPF-203ENST00000551316 AFAP1Q8N556 730 aa23.51■■□□□ 1.35
SNRPF-203ENST00000551316 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
SNRPF-203ENST00000551316 CLTCQ00610 1675 aaKnown RBP23.5■■□□□ 1.35
SNRPF-203ENST00000551316 SETD1AO15047 1707 aaKnown RBP23.49■■□□□ 1.35
SNRPF-203ENST00000551316 CDC42BPBQ9Y5S2 1711 aa23.49■■□□□ 1.35
SNRPF-203ENST00000551316 NPATQ14207 1427 aa23.49■■□□□ 1.35
SNRPF-203ENST00000551316 ITSN2Q9NZM3 1697 aa23.48■■□□□ 1.35
SNRPF-203ENST00000551316 POLR1AO95602 1720 aaPredicted RBP23.48■■□□□ 1.35
SNRPF-203ENST00000551316 NEURL4Q96JN8 1562 aa23.48■■□□□ 1.35
SNRPF-203ENST00000551316 ARHGAP5Q13017 1502 aa23.46■■□□□ 1.35
SNRPF-203ENST00000551316 MLH3Q9UHC1 1453 aa23.45■■□□□ 1.34
SNRPF-203ENST00000551316 RGS17Q9UGC6 210 aaPredicted RBP23.45■■□□□ 1.34
SNRPF-203ENST00000551316 RANGAP1P46060 587 aaPredicted RBP23.44■■□□□ 1.34
SNRPF-203ENST00000551316 CNTLNQ9NXG0 1405 aa23.43■■□□□ 1.34
SNRPF-203ENST00000551316 ABCC1P33527 1531 aa23.42■■□□□ 1.34
SNRPF-203ENST00000551316 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
SNRPF-203ENST00000551316 CPS1P31327 1500 aa23.4■■□□□ 1.34
SNRPF-203ENST00000551316 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.33
SNRPF-203ENST00000551316 VWDEQ8N2E2 1590 aa23.39■■□□□ 1.33
SNRPF-203ENST00000551316 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
SNRPF-203ENST00000551316 STRCP1A6NGW2 1772 aa23.37■■□□□ 1.33
SNRPF-203ENST00000551316 DNMT1P26358 1616 aaKnown RBP23.37■■□□□ 1.33
SNRPF-203ENST00000551316 PPP6R1Q9UPN7 881 aa23.37■■□□□ 1.33
SNRPF-203ENST00000551316 PREX2Q70Z35 1606 aa23.36■■□□□ 1.33
SNRPF-203ENST00000551316 PKD2Q13563 968 aa23.35■■□□□ 1.33
SNRPF-203ENST00000551316 ESF1Q9H501 851 aaKnown RBP23.35■■□□□ 1.33
SNRPF-203ENST00000551316 MYT1LQ9UL68 1186 aa23.35■■□□□ 1.33
SNRPF-203ENST00000551316 ZMYM3Q14202 1370 aa23.35■■□□□ 1.33
SNRPF-203ENST00000551316 SHANK2Q9UPX8 1470 aa23.35■■□□□ 1.33
SNRPF-203ENST00000551316 PTPRKQ15262 1439 aa23.34■■□□□ 1.33
SNRPF-203ENST00000551316 TOM1O60784 492 aa23.32■■□□□ 1.32
SNRPF-203ENST00000551316 PLXNC1O60486 1568 aa23.27■■□□□ 1.32
SNRPF-203ENST00000551316 RNF17Q9BXT8 1623 aaKnown RBP23.27■■□□□ 1.32
SNRPF-203ENST00000551316 SAMD9LQ8IVG5 1584 aa23.27■■□□□ 1.32
SNRPF-203ENST00000551316 CDC42BPAQ5VT25 1732 aa23.25■■□□□ 1.31
SNRPF-203ENST00000551316 A2ML1A8K2U0 1454 aa23.24■■□□□ 1.31
SNRPF-203ENST00000551316 POTEAQ6S8J7 498 aa23.22■■□□□ 1.31
SNRPF-203ENST00000551316 TROQ12816 1431 aaPredicted RBP23.22■■□□□ 1.31
SNRPF-203ENST00000551316 XIRP1Q702N8 1843 aaKnown RBP23.18■■□□□ 1.3
SNRPF-203ENST00000551316 INO80Q9ULG1 1556 aaPredicted RBP23.18■■□□□ 1.3
SNRPF-203ENST00000551316 SRCAPQ6ZRS2 3230 aa23.18■■□□□ 1.3
SNRPF-203ENST00000551316 SYNMO15061 1565 aa23.17■■□□□ 1.3
SNRPF-203ENST00000551316 LRRC7Q96NW7 1537 aa23.16■■□□□ 1.3
SNRPF-203ENST00000551316 SYCP2Q9BX26 1530 aa23.15■■□□□ 1.3
SNRPF-203ENST00000551316 IQGAP1P46940 1657 aa23.15■■□□□ 1.3
SNRPF-203ENST00000551316 ATP7AQ04656 1500 aa23.13■■□□□ 1.29
SNRPF-203ENST00000551316 DEPDC5O75140 1603 aa23.11■■□□□ 1.29
SNRPF-203ENST00000551316 CSRNP3Q8WYN3 585 aa23.09■■□□□ 1.29
SNRPF-203ENST00000551316 ZC3H13Q5T200 1668 aaKnown RBP23.07■■□□□ 1.28
SNRPF-203ENST00000551316 CLIP1P30622 1438 aa23.07■■□□□ 1.28
SNRPF-203ENST00000551316 A2MP01023 1474 aa23.06■■□□□ 1.28
SNRPF-203ENST00000551316 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
SNRPF-203ENST00000551316 MED14O60244 1454 aa23.05■■□□□ 1.28
SNRPF-203ENST00000551316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.281e-6■■■■■ 38.1
SNRPF-203ENST00000551316 NPHP4O75161 1426 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms