RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 EFCAB2Q5VUJ9 269 aa35.7■■■■□ 3.31
SMARCC2-210ENST00000550519 TROQ12816 1431 aaPredicted RBP35.68■■■■□ 3.3
SMARCC2-210ENST00000550519 KIF14Q15058 1648 aa35.64■■■■□ 3.3
SMARCC2-210ENST00000550519 SIGLEC1Q9BZZ2 1709 aa35.62■■■■□ 3.29
SMARCC2-210ENST00000550519 MYO5CQ9NQX4 1742 aa35.61■■■■□ 3.29
SMARCC2-210ENST00000550519 RIMS1Q86UR5 1692 aaKnown RBP35.61■■■■□ 3.29
SMARCC2-210ENST00000550519 PCF11O94913 1555 aaKnown RBP35.6■■■■□ 3.29
SMARCC2-210ENST00000550519 CLIP1P30622 1438 aa35.59■■■■□ 3.29
SMARCC2-210ENST00000550519 LMTK3Q96Q04 1460 aa35.59■■■■□ 3.29
SMARCC2-210ENST00000550519 LRRIQ1Q96JM4 1722 aa35.55■■■■□ 3.28
SMARCC2-210ENST00000550519 ATP10AO60312 1499 aa35.54■■■■□ 3.28
SMARCC2-210ENST00000550519 CASKIN1Q8WXD9 1431 aa35.53■■■■□ 3.28
SMARCC2-210ENST00000550519 ARHGAP5Q13017 1502 aa35.52■■■■□ 3.28
SMARCC2-210ENST00000550519 MLECQ14165 292 aa35.52■■■■□ 3.28
SMARCC2-210ENST00000550519 ZNF518AQ6AHZ1 1483 aa35.51■■■■□ 3.28
SMARCC2-210ENST00000550519 C9orf84Q5VXU9 1444 aa35.5■■■■□ 3.27
SMARCC2-210ENST00000550519 AFAP1Q8N556 730 aa35.48■■■■□ 3.27
SMARCC2-210ENST00000550519 CCDC18Q5T9S5 1454 aa35.48■■■■□ 3.27
SMARCC2-210ENST00000550519 PLPPR3Q6T4P5 718 aa35.45■■■■□ 3.27
SMARCC2-210ENST00000550519 KDM5CP41229 1560 aa35.45■■■■□ 3.27
SMARCC2-210ENST00000550519 ARHGEF12Q9NZN5 1544 aa35.43■■■■□ 3.26
SMARCC2-210ENST00000550519 FER1L4A9Z1Z3 1794 aa35.39■■■■□ 3.26
SMARCC2-210ENST00000550519 HSPA2P54652 639 aa35.39■■■■□ 3.26
SMARCC2-210ENST00000550519 CDC42BPBQ9Y5S2 1711 aa35.39■■■■□ 3.26
SMARCC2-210ENST00000550519 FBXO41Q8TF61 875 aa35.37■■■■□ 3.25
SMARCC2-210ENST00000550519 FYCO1Q9BQS8 1478 aa35.35■■■■□ 3.25
SMARCC2-210ENST00000550519 PREX2Q70Z35 1606 aa35.35■■■■□ 3.25
SMARCC2-210ENST00000550519 MLH3Q9UHC1 1453 aa35.34■■■■□ 3.25
SMARCC2-210ENST00000550519 MYT1LQ9UL68 1186 aa35.32■■■■□ 3.24
SMARCC2-210ENST00000550519 TRAPPC8Q9Y2L5 1435 aa35.32■■■■□ 3.24
SMARCC2-210ENST00000550519 DIP2CQ9Y2E4 1556 aa35.31■■■■□ 3.24
SMARCC2-210ENST00000550519 ABCC1P33527 1531 aa35.31■■■■□ 3.24
SMARCC2-210ENST00000550519 REREQ9P2R6 1566 aa35.29■■■■□ 3.24
SMARCC2-210ENST00000550519 CEBPAP49715 358 aaPredicted RBP35.26■■■■□ 3.24
SMARCC2-210ENST00000550519 ABCA6Q8N139 1617 aa35.24■■■■□ 3.23
SMARCC2-210ENST00000550519 ITSN2Q9NZM3 1697 aa35.21■■■■□ 3.23
SMARCC2-210ENST00000550519 CDC42BPAQ5VT25 1732 aa35.21■■■■□ 3.23
SMARCC2-210ENST00000550519 AGLP35573 1532 aa35.19■■■■□ 3.22
SMARCC2-210ENST00000550519 GPATCH8Q9UKJ3 1502 aaKnown RBP35.17■■■■□ 3.22
SMARCC2-210ENST00000550519 ZNF777Q9ULD5 760 aaPredicted RBP35.14■■■■□ 3.22
SMARCC2-210ENST00000550519 PREX1Q8TCU6 1659 aa35.14■■■■□ 3.22
SMARCC2-210ENST00000550519 KIDINS220Q9ULH0 1771 aa35.13■■■■□ 3.21
SMARCC2-210ENST00000550519 SAMD9LQ8IVG5 1584 aa35.11■■■■□ 3.21
SMARCC2-210ENST00000550519 HNRNPMP52272 730 aaKnown RBP eCLIP35.07■■■■□ 3.2
SMARCC2-210ENST00000550519 UHRF1BP1Q6BDS2 1440 aa35.06■■■■□ 3.2
SMARCC2-210ENST00000550519 SYCP2Q9BX26 1530 aa35.06■■■■□ 3.2
SMARCC2-210ENST00000550519 KIAA1107Q9UPP5 1409 aa35.06■■■■□ 3.2
SMARCC2-210ENST00000550519 ESF1Q9H501 851 aaKnown RBP35.05■■■■□ 3.2
SMARCC2-210ENST00000550519 CFDP1Q9UEE9 299 aaPredicted RBP35.05■■■■□ 3.2
SMARCC2-210ENST00000550519 SETD1BQ9UPS6 1966 aaKnown RBP35.04■■■■□ 3.2
SMARCC2-210ENST00000550519 SPAG9O60271 1321 aaKnown RBP35.04■■■■□ 3.2
SMARCC2-210ENST00000550519 MTUS2Q5JR59 1369 aa35.03■■■■□ 3.2
SMARCC2-210ENST00000550519 CCNB3Q8WWL7 1395 aa35.03■■■■□ 3.2
SMARCC2-210ENST00000550519 PLEKHH2Q8IVE3 1493 aa35.01■■■■□ 3.19
SMARCC2-210ENST00000550519 CERKQ8TCT0 537 aa35■■■■□ 3.19
SMARCC2-210ENST00000550519 C3P01024 1663 aa35■■■■□ 3.19
SMARCC2-210ENST00000550519 CNTLNQ9NXG0 1405 aa34.99■■■■□ 3.19
SMARCC2-210ENST00000550519 DMRT2Q9Y5R5 561 aa34.96■■■■□ 3.19
SMARCC2-210ENST00000550519 ATP7AQ04656 1500 aa34.93■■■■□ 3.18
SMARCC2-210ENST00000550519 STRCQ7RTU9 1775 aa34.92■■■■□ 3.18
SMARCC2-210ENST00000550519 INO80Q9ULG1 1556 aaPredicted RBP34.9■■■■□ 3.18
SMARCC2-210ENST00000550519 CEP162Q5TB80 1403 aa34.89■■■■□ 3.18
SMARCC2-210ENST00000550519 EHBP1L1Q8N3D4 1523 aa34.88■■■■□ 3.17
SMARCC2-210ENST00000550519 TIAM1Q13009 1591 aa34.87■■■■□ 3.17
SMARCC2-210ENST00000550519 ZNF644Q9H582 1327 aaPredicted RBP34.86■■■■□ 3.17
SMARCC2-210ENST00000550519 A2MP01023 1474 aa34.86■■■■□ 3.17
SMARCC2-210ENST00000550519 PLXNC1O60486 1568 aa34.86■■■■□ 3.17
SMARCC2-210ENST00000550519 ZMYM3Q14202 1370 aa34.86■■■■□ 3.17
SMARCC2-210ENST00000550519 NPATQ14207 1427 aa34.84■■■■□ 3.17
SMARCC2-210ENST00000550519 SUPT6HQ7KZ85 1726 aaKnown RBP34.83■■■■□ 3.17
SMARCC2-210ENST00000550519 MBD5Q9P267 1494 aa34.83■■■■□ 3.17
SMARCC2-210ENST00000550519 MROH2AA6NES4 1674 aa34.82■■■■□ 3.16
SMARCC2-210ENST00000550519 PTPRTO14522 1441 aa34.81■■■■□ 3.16
SMARCC2-210ENST00000550519 GGT6Q6P531 493 aa34.75■■■■□ 3.15
SMARCC2-210ENST00000550519 RTEL1-TNFRSF6BF6WH68 1400 aa34.74■■■■□ 3.15
SMARCC2-210ENST00000550519 NCOA1Q15788 1441 aa34.74■■■■□ 3.15
SMARCC2-210ENST00000550519 PPP6R1Q9UPN7 881 aa34.73■■■■□ 3.15
SMARCC2-210ENST00000550519 CLTCQ00610 1675 aaKnown RBP34.7■■■■□ 3.14
SMARCC2-210ENST00000550519 ADGBQ8N7X0 1667 aa34.7■■■■□ 3.14
SMARCC2-210ENST00000550519 NCOA2Q15596 1464 aa34.69■■■■□ 3.14
SMARCC2-210ENST00000550519 PTPRKQ15262 1439 aa34.68■■■■□ 3.14
SMARCC2-210ENST00000550519 DHX29Q7Z478 1369 aaKnown RBP34.66■■■■□ 3.14
SMARCC2-210ENST00000550519 CAMSAP1Q5T5Y3 1602 aa34.64■■■■□ 3.14
SMARCC2-210ENST00000550519 RSPH4AQ5TD94 716 aa34.62■■■■□ 3.13
SMARCC2-210ENST00000550519 CCDC141Q6ZP82 1450 aa34.62■■■■□ 3.13
SMARCC2-210ENST00000550519 CAMSAP2Q08AD1 1489 aa34.61■■■■□ 3.13
SMARCC2-210ENST00000550519 LTBP4Q8N2S1 1624 aa34.59■■■■□ 3.13
SMARCC2-210ENST00000550519 MYO3AQ8NEV4 1616 aa34.57■■■■□ 3.12
SMARCC2-210ENST00000550519 NCKAP5LQ9HCH0 1330 aa34.55■■■■□ 3.12
SMARCC2-210ENST00000550519 VPS8Q8N3P4 1428 aa34.55■■■■□ 3.12
SMARCC2-210ENST00000550519 ZNF142P52746 1687 aaPredicted RBP34.55■■■■□ 3.12
SMARCC2-210ENST00000550519 LOC105371045A0A1W2PR82 267 aa34.55■■■■□ 3.12
SMARCC2-210ENST00000550519 PLA2R1Q13018 1463 aa34.54■■■■□ 3.12
SMARCC2-210ENST00000550519 KIF3BO15066 747 aa34.54■■■■□ 3.12
SMARCC2-210ENST00000550519 CEP170BQ9Y4F5 1589 aaPredicted RBP34.53■■■■□ 3.12
SMARCC2-210ENST00000550519 PKD2Q13563 968 aa34.52■■■■□ 3.12
SMARCC2-210ENST00000550519 LRRC9Q6ZRR7 1453 aa34.51■■■■□ 3.11
SMARCC2-210ENST00000550519 TCOF1Q13428 1488 aaKnown RBP34.49■■■■□ 3.11
SMARCC2-210ENST00000550519 ARHGEF5Q12774 1597 aa34.49■■■■□ 3.11
SMARCC2-210ENST00000550519 IQSEC2Q5JU85 1478 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms