RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 GTPBP6O43824 516 aaPredicted RBP6.43□□□□□ -1.38
RAB5B-207ENST00000549915 SPRYD3Q8NCJ5 442 aa6.42□□□□□ -1.38
RAB5B-207ENST00000549915 FAM163AQ96GL9 167 aaPredicted RBP6.42□□□□□ -1.38
RAB5B-207ENST00000549915 PCDH10Q9P2E7 1040 aa6.42□□□□□ -1.38
RAB5B-207ENST00000549915 KIF3CO14782 793 aa6.4□□□□□ -1.38
RAB5B-207ENST00000549915 PPP1R37O75864 691 aa6.4□□□□□ -1.38
RAB5B-207ENST00000549915 GPHNQ9NQX3 736 aaPredicted RBP6.4□□□□□ -1.38
RAB5B-207ENST00000549915 PDE4AP27815 886 aa6.39□□□□□ -1.39
RAB5B-207ENST00000549915 C2orf72A6NCS6 295 aa6.38□□□□□ -1.39
RAB5B-207ENST00000549915 ST18O60284 1047 aa6.38□□□□□ -1.39
RAB5B-207ENST00000549915 SLC34A2O95436 690 aa6.38□□□□□ -1.39
RAB5B-207ENST00000549915 FOXK1P85037 733 aa6.38□□□□□ -1.39
RAB5B-207ENST00000549915 POTEMA6NI47 508 aa6.37□□□□□ -1.39
RAB5B-207ENST00000549915 TMEM92Q6UXU6 159 aa6.37□□□□□ -1.39
RAB5B-207ENST00000549915 TBC1D12O60347 775 aa6.36□□□□□ -1.39
RAB5B-207ENST00000549915 HOXB3P14651 431 aaPredicted RBP6.36□□□□□ -1.39
RAB5B-207ENST00000549915 HOXB1P14653 301 aaPredicted RBP6.36□□□□□ -1.39
RAB5B-207ENST00000549915 POTEGQ6S5H5 508 aa6.36□□□□□ -1.39
RAB5B-207ENST00000549915 ZNF316A6NFI3 1004 aaPredicted RBP6.35□□□□□ -1.39
RAB5B-207ENST00000549915 EMP3P54852 163 aa6.35□□□□□ -1.39
RAB5B-207ENST00000549915 CRISPLD2Q9H0B8 497 aa6.35□□□□□ -1.39
RAB5B-207ENST00000549915 PSDA5PKW4 1024 aaPredicted RBP6.33□□□□□ -1.4
RAB5B-207ENST00000549915 PAXIP1Q6ZW49 1069 aaPredicted RBP6.33□□□□□ -1.4
RAB5B-207ENST00000549915 DDX27Q96GQ7 796 aaKnown RBP6.33□□□□□ -1.4
RAB5B-207ENST00000549915 PPP1R15BQ5SWA1 713 aa6.32□□□□□ -1.4
RAB5B-207ENST00000549915 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
RAB5B-207ENST00000549915 PLPP6Q8IY26 295 aa6.32□□□□□ -1.4
RAB5B-207ENST00000549915 CFAP44Q96MT7 982 aa6.32□□□□□ -1.4
RAB5B-207ENST00000549915 MFSD10Q14728 455 aa6.31□□□□□ -1.4
RAB5B-207ENST00000549915 PTCD2Q8WV60 388 aaKnown RBP6.31□□□□□ -1.4
RAB5B-207ENST00000549915 DSG2Q14126 1118 aa6.3□□□□□ -1.4
RAB5B-207ENST00000549915 ERBB3P21860 1342 aa6.29□□□□□ -1.4
RAB5B-207ENST00000549915 HRCP23327 699 aa6.29□□□□□ -1.4
RAB5B-207ENST00000549915 GPR153Q6NV75 609 aa6.29□□□□□ -1.4
RAB5B-207ENST00000549915 LARP6Q9BRS8 491 aaKnown RBP6.29□□□□□ -1.4
RAB5B-207ENST00000549915 PCDHGA4Q9Y5G9 962 aa6.29□□□□□ -1.4
RAB5B-207ENST00000549915 NCKAP5LQ9HCH0 1330 aa6.28□□□□□ -1.4
RAB5B-207ENST00000549915 MARVELD3Q96A59 401 aa6.27□□□□□ -1.41
RAB5B-207ENST00000549915 WDR70Q9NW82 654 aa6.27□□□□□ -1.41
RAB5B-207ENST00000549915 FAM205CA6NFA0 338 aa6.26□□□□□ -1.41
RAB5B-207ENST00000549915 ARSIQ5FYB1 569 aa6.26□□□□□ -1.41
RAB5B-207ENST00000549915 CDAN1Q8IWY9 1227 aa6.25□□□□□ -1.41
RAB5B-207ENST00000549915 OXER1Q8TDS5 423 aa6.25□□□□□ -1.41
RAB5B-207ENST00000549915 HS3ST6Q96QI5 342 aa6.25□□□□□ -1.41
RAB5B-207ENST00000549915 PBX2P40425 430 aa6.24□□□□□ -1.41
RAB5B-207ENST00000549915 KCNH8Q96L42 1107 aa6.24□□□□□ -1.41
RAB5B-207ENST00000549915 PLCB2Q00722 1185 aa6.23□□□□□ -1.41
RAB5B-207ENST00000549915 VARS2Q5ST30 1063 aaKnown RBP6.23□□□□□ -1.41
RAB5B-207ENST00000549915 NUDT7P0C024 238 aa6.22□□□□□ -1.41
RAB5B-207ENST00000549915 MAP3K9P80192 1104 aa6.22□□□□□ -1.41
RAB5B-207ENST00000549915 CAMK2BQ13554 666 aa6.22□□□□□ -1.41
RAB5B-207ENST00000549915 PPP4R3BQ5MIZ7 849 aa6.22□□□□□ -1.41
RAB5B-207ENST00000549915 CADPS2Q86UW7 1296 aa6.22□□□□□ -1.41
RAB5B-207ENST00000549915 ZNF687Q8N1G0 1237 aa6.22□□□□□ -1.41
RAB5B-207ENST00000549915 PTGER2P43116 358 aa6.2□□□□□ -1.42
RAB5B-207ENST00000549915 E2F4Q16254 413 aa6.2□□□□□ -1.42
RAB5B-207ENST00000549915 P3H3Q8IVL6 736 aa6.2□□□□□ -1.42
RAB5B-207ENST00000549915 UPF1Q92900 1129 aaKnown RBP eCLIP6.2□□□□□ -1.42
RAB5B-207ENST00000549915 ZCCHC6Q5VYS8 1495 aaKnown RBP6.2□□□□□ -1.42
RAB5B-207ENST00000549915 SPDYE16A6NNV3 312 aaPredicted RBP6.19□□□□□ -1.42
RAB5B-207ENST00000549915 ARIH1Q9Y4X5 557 aaPredicted RBP6.19□□□□□ -1.42
RAB5B-207ENST00000549915 KDM4FA0A1W2PPD8 638 aa6.18□□□□□ -1.42
RAB5B-207ENST00000549915 JPH4Q96JJ6 628 aa6.18□□□□□ -1.42
RAB5B-207ENST00000549915 LHX6Q9UPM6 363 aa6.18□□□□□ -1.42
RAB5B-207ENST00000549915 DCAF1Q9Y4B6 1507 aa6.18□□□□□ -1.42
RAB5B-207ENST00000549915 EVI5O60447 810 aa6.17□□□□□ -1.42
RAB5B-207ENST00000549915 ANO8Q9HCE9 1232 aaPredicted RBP6.17□□□□□ -1.42
RAB5B-207ENST00000549915 KHSRPQ92945 711 aaKnown RBP eCLIP6.16□□□□□ -1.42
RAB5B-207ENST00000549915 FBXW7Q969H0 707 aa6.16□□□□□ -1.42
RAB5B-207ENST00000549915 CCDC180Q9P1Z9 1646 aa6.16□□□□□ -1.42
RAB5B-207ENST00000549915 EMILIN3Q9NT22 766 aa6.15□□□□□ -1.42
RAB5B-207ENST00000549915 ARHGAP33O14559 1287 aa6.14□□□□□ -1.43
RAB5B-207ENST00000549915 PDIA6Q15084 440 aa6.14□□□□□ -1.43
RAB5B-207ENST00000549915 EPAS1Q99814 870 aa6.14□□□□□ -1.43
RAB5B-207ENST00000549915 PHF14O94880 888 aa6.13□□□□□ -1.43
RAB5B-207ENST00000549915 FOSBP53539 338 aa6.13□□□□□ -1.43
RAB5B-207ENST00000549915 ZNF454Q8N9F8 522 aa6.13□□□□□ -1.43
RAB5B-207ENST00000549915 ARHGEF1Q92888 912 aaKnown RBP6.13□□□□□ -1.43
RAB5B-207ENST00000549915 TSHZ2Q9NRE2 1034 aa6.13□□□□□ -1.43
RAB5B-207ENST00000549915 POTEB3A0JP26 581 aa6.12□□□□□ -1.43
RAB5B-207ENST00000549915 DPYSL4O14531 572 aa6.12□□□□□ -1.43
RAB5B-207ENST00000549915 PTPREP23469 700 aa6.12□□□□□ -1.43
RAB5B-207ENST00000549915 TYW1BQ6NUM6 668 aa6.12□□□□□ -1.43
RAB5B-207ENST00000549915 POTEBQ6S5H4 581 aa6.12□□□□□ -1.43
RAB5B-207ENST00000549915 ZDHHC16Q969W1 377 aa6.12□□□□□ -1.43
RAB5B-207ENST00000549915 MYO15BQ96JP2 1530 aa6.12□□□□□ -1.43
RAB5B-207ENST00000549915 BCL2L12Q9HB09 334 aa6.12□□□□□ -1.43
RAB5B-207ENST00000549915 SHROOM4Q9ULL8 1493 aa6.11□□□□□ -1.43
RAB5B-207ENST00000549915 TK2O00142 265 aa6.11□□□□□ -1.43
RAB5B-207ENST00000549915 HAP1P54257 671 aaPredicted RBP6.11□□□□□ -1.43
RAB5B-207ENST00000549915 LSM11P83369 360 aaKnown RBP eCLIP6.11□□□□□ -1.43
RAB5B-207ENST00000549915 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
RAB5B-207ENST00000549915 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
RAB5B-207ENST00000549915 SLC4A5Q9BY07 1137 aa6.09□□□□□ -1.43
RAB5B-207ENST00000549915 PLSCR2Q9NRY7 297 aa6.09□□□□□ -1.43
RAB5B-207ENST00000549915 SUPT5HO00267 1087 aaKnown RBP6.08□□□□□ -1.44
RAB5B-207ENST00000549915 SPNS2Q8IVW8 549 aa6.08□□□□□ -1.44
RAB5B-207ENST00000549915 VSIG10Q8N0Z9 540 aa6.08□□□□□ -1.44
RAB5B-207ENST00000549915 CERKQ8TCT0 537 aa6.07□□□□□ -1.44
RAB5B-207ENST00000549915 STAC3Q96MF2 364 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms