RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PLCH2O75038 1416 aa33.51■■■□□ 2.95
SSH1-207ENST00000547862 PCF11O94913 1555 aaKnown RBP33.5■■■□□ 2.95
SSH1-207ENST00000547862 POGZQ7Z3K3 1410 aa33.48■■■□□ 2.95
SSH1-207ENST00000547862 SCAPERQ9BY12 1400 aa33.48■■■□□ 2.95
SSH1-207ENST00000547862 TROQ12816 1431 aaPredicted RBP33.45■■■□□ 2.94
SSH1-207ENST00000547862 CDK11AQ9UQ88 783 aaPredicted RBP33.44■■■□□ 2.94
SSH1-207ENST00000547862 ARHGAP5Q13017 1502 aa33.43■■■□□ 2.94
SSH1-207ENST00000547862 FER1L4A9Z1Z3 1794 aa33.43■■■□□ 2.94
SSH1-207ENST00000547862 CLIP1P30622 1438 aa33.43■■■□□ 2.94
SSH1-207ENST00000547862 PLPPR3Q6T4P5 718 aa33.42■■■□□ 2.94
SSH1-207ENST00000547862 MAGI2Q86UL8 1455 aa33.4■■■□□ 2.94
SSH1-207ENST00000547862 MLECQ14165 292 aa33.36■■■□□ 2.93
SSH1-207ENST00000547862 CDC42BPBQ9Y5S2 1711 aa33.36■■■□□ 2.93
SSH1-207ENST00000547862 EFCAB2Q5VUJ9 269 aa33.35■■■□□ 2.93
SSH1-207ENST00000547862 CCDC18Q5T9S5 1454 aa33.32■■■□□ 2.92
SSH1-207ENST00000547862 LMTK3Q96Q04 1460 aa33.32■■■□□ 2.92
SSH1-207ENST00000547862 PREX2Q70Z35 1606 aa33.32■■■□□ 2.92
SSH1-207ENST00000547862 CASKIN1Q8WXD9 1431 aa33.3■■■□□ 2.92
SSH1-207ENST00000547862 ZNF518AQ6AHZ1 1483 aa33.29■■■□□ 2.92
SSH1-207ENST00000547862 C9orf84Q5VXU9 1444 aa33.28■■■□□ 2.92
SSH1-207ENST00000547862 ATP10AO60312 1499 aa33.27■■■□□ 2.92
SSH1-207ENST00000547862 KDM5CP41229 1560 aa33.26■■■□□ 2.92
SSH1-207ENST00000547862 MYT1LQ9UL68 1186 aa33.24■■■□□ 2.91
SSH1-207ENST00000547862 CDC42BPAQ5VT25 1732 aa33.24■■■□□ 2.91
SSH1-207ENST00000547862 ITSN2Q9NZM3 1697 aa33.23■■■□□ 2.91
SSH1-207ENST00000547862 FYCO1Q9BQS8 1478 aa33.23■■■□□ 2.91
SSH1-207ENST00000547862 ABCC1P33527 1531 aa33.21■■■□□ 2.91
SSH1-207ENST00000547862 DIP2CQ9Y2E4 1556 aa33.21■■■□□ 2.91
SSH1-207ENST00000547862 ARHGEF12Q9NZN5 1544 aa33.2■■■□□ 2.91
SSH1-207ENST00000547862 ABCA6Q8N139 1617 aa33.2■■■□□ 2.9
SSH1-207ENST00000547862 AFAP1Q8N556 730 aa33.18■■■□□ 2.9
SSH1-207ENST00000547862 HSPA2P54652 639 aa33.15■■■□□ 2.9
SSH1-207ENST00000547862 PREX1Q8TCU6 1659 aa33.1■■■□□ 2.89
SSH1-207ENST00000547862 TRAPPC8Q9Y2L5 1435 aa33.1■■■□□ 2.89
SSH1-207ENST00000547862 REREQ9P2R6 1566 aa33.06■■■□□ 2.88
SSH1-207ENST00000547862 SAMD9LQ8IVG5 1584 aa33.05■■■□□ 2.88
SSH1-207ENST00000547862 KIDINS220Q9ULH0 1771 aa33.05■■■□□ 2.88
SSH1-207ENST00000547862 MLH3Q9UHC1 1453 aa33.05■■■□□ 2.88
SSH1-207ENST00000547862 SYCP2Q9BX26 1530 aa33.02■■■□□ 2.88
SSH1-207ENST00000547862 ZNF777Q9ULD5 760 aaPredicted RBP33.02■■■□□ 2.88
SSH1-207ENST00000547862 CEBPAP49715 358 aaPredicted RBP33.01■■■□□ 2.87
SSH1-207ENST00000547862 C3P01024 1663 aa32.98■■■□□ 2.87
SSH1-207ENST00000547862 FBXO41Q8TF61 875 aa32.97■■■□□ 2.87
SSH1-207ENST00000547862 GPATCH8Q9UKJ3 1502 aaKnown RBP32.95■■■□□ 2.87
SSH1-207ENST00000547862 AGLP35573 1532 aa32.92■■■□□ 2.86
SSH1-207ENST00000547862 SUPT6HQ7KZ85 1726 aaKnown RBP32.91■■■□□ 2.86
SSH1-207ENST00000547862 MTUS2Q5JR59 1369 aa32.9■■■□□ 2.86
SSH1-207ENST00000547862 UHRF1BP1Q6BDS2 1440 aa32.87■■■□□ 2.85
SSH1-207ENST00000547862 CCNB3Q8WWL7 1395 aa32.87■■■□□ 2.85
SSH1-207ENST00000547862 ESF1Q9H501 851 aaKnown RBP32.86■■■□□ 2.85
SSH1-207ENST00000547862 ATP7AQ04656 1500 aa32.86■■■□□ 2.85
SSH1-207ENST00000547862 EHBP1L1Q8N3D4 1523 aa32.85■■■□□ 2.85
SSH1-207ENST00000547862 TIAM1Q13009 1591 aa32.84■■■□□ 2.85
SSH1-207ENST00000547862 INO80Q9ULG1 1556 aaPredicted RBP32.84■■■□□ 2.85
SSH1-207ENST00000547862 HNRNPMP52272 730 aaKnown RBP eCLIP32.84■■■□□ 2.85
SSH1-207ENST00000547862 CEP162Q5TB80 1403 aa32.83■■■□□ 2.85
SSH1-207ENST00000547862 SPAG9O60271 1321 aaKnown RBP32.82■■■□□ 2.84
SSH1-207ENST00000547862 SETD1BQ9UPS6 1966 aaKnown RBP32.82■■■□□ 2.84
SSH1-207ENST00000547862 CFDP1Q9UEE9 299 aaPredicted RBP32.82■■■□□ 2.84
SSH1-207ENST00000547862 STRCQ7RTU9 1775 aa32.82■■■□□ 2.84
SSH1-207ENST00000547862 PLEKHH2Q8IVE3 1493 aa32.8■■■□□ 2.84
SSH1-207ENST00000547862 MROH2AA6NES4 1674 aa32.76■■■□□ 2.84
SSH1-207ENST00000547862 CLTCQ00610 1675 aaKnown RBP32.75■■■□□ 2.83
SSH1-207ENST00000547862 CNTLNQ9NXG0 1405 aa32.74■■■□□ 2.83
SSH1-207ENST00000547862 KIAA1107Q9UPP5 1409 aa32.74■■■□□ 2.83
SSH1-207ENST00000547862 PLXNC1O60486 1568 aa32.74■■■□□ 2.83
SSH1-207ENST00000547862 ADGBQ8N7X0 1667 aa32.72■■■□□ 2.83
SSH1-207ENST00000547862 A2MP01023 1474 aa32.7■■■□□ 2.83
SSH1-207ENST00000547862 ZNF644Q9H582 1327 aaPredicted RBP32.67■■■□□ 2.82
SSH1-207ENST00000547862 CERKQ8TCT0 537 aa32.66■■■□□ 2.82
SSH1-207ENST00000547862 MYO3AQ8NEV4 1616 aa32.59■■■□□ 2.81
SSH1-207ENST00000547862 NCOA2Q15596 1464 aa32.59■■■□□ 2.81
SSH1-207ENST00000547862 MBD5Q9P267 1494 aa32.58■■■□□ 2.81
SSH1-207ENST00000547862 CAMSAP2Q08AD1 1489 aa32.57■■■□□ 2.8
SSH1-207ENST00000547862 DMRT2Q9Y5R5 561 aa32.57■■■□□ 2.8
SSH1-207ENST00000547862 ZMYM3Q14202 1370 aa32.57■■■□□ 2.8
SSH1-207ENST00000547862 GGT6Q6P531 493 aa32.56■■■□□ 2.8
SSH1-207ENST00000547862 NPATQ14207 1427 aa32.56■■■□□ 2.8
SSH1-207ENST00000547862 CAMSAP1Q5T5Y3 1602 aa32.55■■■□□ 2.8
SSH1-207ENST00000547862 ZNF142P52746 1687 aaPredicted RBP32.53■■■□□ 2.8
SSH1-207ENST00000547862 NCOA1Q15788 1441 aa32.52■■■□□ 2.8
SSH1-207ENST00000547862 CCDC141Q6ZP82 1450 aa32.52■■■□□ 2.8
SSH1-207ENST00000547862 PTPRTO14522 1441 aa32.5■■■□□ 2.79
SSH1-207ENST00000547862 CEP170BQ9Y4F5 1589 aaPredicted RBP32.48■■■□□ 2.79
SSH1-207ENST00000547862 RTEL1-TNFRSF6BF6WH68 1400 aa32.46■■■□□ 2.79
SSH1-207ENST00000547862 PTPRKQ15262 1439 aa32.45■■■□□ 2.79
SSH1-207ENST00000547862 VPS8Q8N3P4 1428 aa32.45■■■□□ 2.79
SSH1-207ENST00000547862 LOC105371045A0A1W2PR82 267 aa32.45■■■□□ 2.79
SSH1-207ENST00000547862 LRRC9Q6ZRR7 1453 aa32.4■■■□□ 2.78
SSH1-207ENST00000547862 ARHGEF5Q12774 1597 aa32.4■■■□□ 2.78
SSH1-207ENST00000547862 DHX29Q7Z478 1369 aaKnown RBP32.39■■■□□ 2.78
SSH1-207ENST00000547862 LTBP4Q8N2S1 1624 aa32.38■■■□□ 2.77
SSH1-207ENST00000547862 NCKAP5LQ9HCH0 1330 aa32.36■■■□□ 2.77
SSH1-207ENST00000547862 KDM5DQ9BY66 1539 aa32.36■■■□□ 2.77
SSH1-207ENST00000547862 KIF3BO15066 747 aa32.35■■■□□ 2.77
SSH1-207ENST00000547862 PLA2R1Q13018 1463 aa32.31■■■□□ 2.76
SSH1-207ENST00000547862 PPP6R1Q9UPN7 881 aa32.3■■■□□ 2.76
SSH1-207ENST00000547862 DNMT1P26358 1616 aaKnown RBP32.29■■■□□ 2.76
SSH1-207ENST00000547862 A2ML1A8K2U0 1454 aa32.28■■■□□ 2.76
SSH1-207ENST00000547862 POLR1AO95602 1720 aaPredicted RBP32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms