RNA–Protein interactions for RNA: ENST00000547566.5

HNRNPA1-205, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 1 (best)

Gene HNRNPA1, Length 1,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-205ENST00000547566 CDK11AQ9UQ88 783 aaPredicted RBP26.54■■□□□ 1.84
HNRNPA1-205ENST00000547566 MAGI2Q86UL8 1455 aa26.54■■□□□ 1.84
HNRNPA1-205ENST00000547566 SCAPERQ9BY12 1400 aa26.53■■□□□ 1.84
HNRNPA1-205ENST00000547566 YEATS2Q9ULM3 1422 aa26.53■■□□□ 1.84
HNRNPA1-205ENST00000547566 POGZQ7Z3K3 1410 aa26.51■■□□□ 1.83
HNRNPA1-205ENST00000547566 TROQ12816 1431 aaPredicted RBP26.49■■□□□ 1.83
HNRNPA1-205ENST00000547566 EFCAB2Q5VUJ9 269 aa26.48■■□□□ 1.83
HNRNPA1-205ENST00000547566 CDC42BPBQ9Y5S2 1711 aa26.45■■□□□ 1.82
HNRNPA1-205ENST00000547566 FER1L4A9Z1Z3 1794 aa26.44■■□□□ 1.82
HNRNPA1-205ENST00000547566 CLIP1P30622 1438 aa26.44■■□□□ 1.82
HNRNPA1-205ENST00000547566 PCF11O94913 1555 aaKnown RBP26.44■■□□□ 1.82
HNRNPA1-205ENST00000547566 ARHGAP5Q13017 1502 aa26.42■■□□□ 1.82
HNRNPA1-205ENST00000547566 LMTK3Q96Q04 1460 aa26.41■■□□□ 1.82
HNRNPA1-205ENST00000547566 CASKIN1Q8WXD9 1431 aa26.4■■□□□ 1.82
HNRNPA1-205ENST00000547566 ATP10AO60312 1499 aa26.39■■□□□ 1.82
HNRNPA1-205ENST00000547566 CCDC18Q5T9S5 1454 aa26.39■■□□□ 1.82
HNRNPA1-205ENST00000547566 ZNF518AQ6AHZ1 1483 aa26.37■■□□□ 1.81
HNRNPA1-205ENST00000547566 KDM5CP41229 1560 aa26.37■■□□□ 1.81
HNRNPA1-205ENST00000547566 PREX2Q70Z35 1606 aa26.36■■□□□ 1.81
HNRNPA1-205ENST00000547566 C9orf84Q5VXU9 1444 aa26.36■■□□□ 1.81
HNRNPA1-205ENST00000547566 MLECQ14165 292 aa26.35■■□□□ 1.81
HNRNPA1-205ENST00000547566 CDC42BPAQ5VT25 1732 aa26.33■■□□□ 1.81
HNRNPA1-205ENST00000547566 ARHGEF12Q9NZN5 1544 aa26.33■■□□□ 1.81
HNRNPA1-205ENST00000547566 PLPPR3Q6T4P5 718 aa26.31■■□□□ 1.8
HNRNPA1-205ENST00000547566 AFAP1Q8N556 730 aa26.31■■□□□ 1.8
HNRNPA1-205ENST00000547566 FYCO1Q9BQS8 1478 aa26.3■■□□□ 1.8
HNRNPA1-205ENST00000547566 ITSN2Q9NZM3 1697 aa26.29■■□□□ 1.8
HNRNPA1-205ENST00000547566 DIP2CQ9Y2E4 1556 aa26.28■■□□□ 1.8
HNRNPA1-205ENST00000547566 ABCC1P33527 1531 aa26.27■■□□□ 1.8
HNRNPA1-205ENST00000547566 ABCA6Q8N139 1617 aa26.25■■□□□ 1.79
HNRNPA1-205ENST00000547566 REREQ9P2R6 1566 aa26.24■■□□□ 1.79
HNRNPA1-205ENST00000547566 MLH3Q9UHC1 1453 aa26.23■■□□□ 1.79
HNRNPA1-205ENST00000547566 HSPA2P54652 639 aa26.23■■□□□ 1.79
HNRNPA1-205ENST00000547566 MYT1LQ9UL68 1186 aa26.22■■□□□ 1.79
HNRNPA1-205ENST00000547566 TRAPPC8Q9Y2L5 1435 aa26.22■■□□□ 1.79
HNRNPA1-205ENST00000547566 PREX1Q8TCU6 1659 aa26.21■■□□□ 1.79
HNRNPA1-205ENST00000547566 SETD1BQ9UPS6 1966 aaKnown RBP26.2■■□□□ 1.78
HNRNPA1-205ENST00000547566 KIDINS220Q9ULH0 1771 aa26.2■■□□□ 1.78
HNRNPA1-205ENST00000547566 FBXO41Q8TF61 875 aa26.17■■□□□ 1.78
HNRNPA1-205ENST00000547566 SAMD9LQ8IVG5 1584 aa26.15■■□□□ 1.78
HNRNPA1-205ENST00000547566 CEBPAP49715 358 aaPredicted RBP26.14■■□□□ 1.78
HNRNPA1-205ENST00000547566 AGLP35573 1532 aa26.14■■□□□ 1.77
HNRNPA1-205ENST00000547566 GPATCH8Q9UKJ3 1502 aaKnown RBP26.13■■□□□ 1.77
HNRNPA1-205ENST00000547566 C3P01024 1663 aa26.12■■□□□ 1.77
HNRNPA1-205ENST00000547566 SYCP2Q9BX26 1530 aa26.09■■□□□ 1.77
HNRNPA1-205ENST00000547566 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
HNRNPA1-205ENST00000547566 STRCQ7RTU9 1775 aa26.05■■□□□ 1.76
HNRNPA1-205ENST00000547566 SUPT6HQ7KZ85 1726 aaKnown RBP26.02■■□□□ 1.76
HNRNPA1-205ENST00000547566 HNRNPMP52272 730 aaKnown RBP eCLIP26.02■■□□□ 1.76
HNRNPA1-205ENST00000547566 MTUS2Q5JR59 1369 aa26.02■■□□□ 1.76
HNRNPA1-205ENST00000547566 UHRF1BP1Q6BDS2 1440 aa26.02■■□□□ 1.76
HNRNPA1-205ENST00000547566 CCNB3Q8WWL7 1395 aa26.01■■□□□ 1.75
HNRNPA1-205ENST00000547566 CFDP1Q9UEE9 299 aaPredicted RBP26.01■■□□□ 1.75
HNRNPA1-205ENST00000547566 KIAA1107Q9UPP5 1409 aa26.01■■□□□ 1.75
HNRNPA1-205ENST00000547566 PLEKHH2Q8IVE3 1493 aa26■■□□□ 1.75
HNRNPA1-205ENST00000547566 SPAG9O60271 1321 aaKnown RBP26■■□□□ 1.75
HNRNPA1-205ENST00000547566 ESF1Q9H501 851 aaKnown RBP26■■□□□ 1.75
HNRNPA1-205ENST00000547566 INO80Q9ULG1 1556 aaPredicted RBP25.99■■□□□ 1.75
HNRNPA1-205ENST00000547566 ATP7AQ04656 1500 aa25.99■■□□□ 1.75
HNRNPA1-205ENST00000547566 MROH2AA6NES4 1674 aa25.97■■□□□ 1.75
HNRNPA1-205ENST00000547566 TIAM1Q13009 1591 aa25.97■■□□□ 1.75
HNRNPA1-205ENST00000547566 EHBP1L1Q8N3D4 1523 aa25.97■■□□□ 1.75
HNRNPA1-205ENST00000547566 CNTLNQ9NXG0 1405 aa25.97■■□□□ 1.75
HNRNPA1-205ENST00000547566 CEP162Q5TB80 1403 aa25.96■■□□□ 1.75
HNRNPA1-205ENST00000547566 PLXNC1O60486 1568 aa25.94■■□□□ 1.74
HNRNPA1-205ENST00000547566 CERKQ8TCT0 537 aa25.92■■□□□ 1.74
HNRNPA1-205ENST00000547566 ADGBQ8N7X0 1667 aa25.91■■□□□ 1.74
HNRNPA1-205ENST00000547566 A2MP01023 1474 aa25.9■■□□□ 1.74
HNRNPA1-205ENST00000547566 CLTCQ00610 1675 aaKnown RBP25.9■■□□□ 1.74
HNRNPA1-205ENST00000547566 DMRT2Q9Y5R5 561 aa25.89■■□□□ 1.74
HNRNPA1-205ENST00000547566 ZNF644Q9H582 1327 aaPredicted RBP25.88■■□□□ 1.73
HNRNPA1-205ENST00000547566 MBD5Q9P267 1494 aa25.85■■□□□ 1.73
HNRNPA1-205ENST00000547566 ZMYM3Q14202 1370 aa25.85■■□□□ 1.73
HNRNPA1-205ENST00000547566 NPATQ14207 1427 aa25.85■■□□□ 1.73
HNRNPA1-205ENST00000547566 PTPRTO14522 1441 aa25.81■■□□□ 1.72
HNRNPA1-205ENST00000547566 RTEL1-TNFRSF6BF6WH68 1400 aa25.8■■□□□ 1.72
HNRNPA1-205ENST00000547566 NCOA2Q15596 1464 aa25.79■■□□□ 1.72
HNRNPA1-205ENST00000547566 GGT6Q6P531 493 aa25.78■■□□□ 1.72
HNRNPA1-205ENST00000547566 NCOA1Q15788 1441 aa25.78■■□□□ 1.72
HNRNPA1-205ENST00000547566 ZNF142P52746 1687 aaPredicted RBP25.77■■□□□ 1.72
HNRNPA1-205ENST00000547566 CAMSAP1Q5T5Y3 1602 aa25.76■■□□□ 1.71
HNRNPA1-205ENST00000547566 MYO3AQ8NEV4 1616 aa25.76■■□□□ 1.71
HNRNPA1-205ENST00000547566 CAMSAP2Q08AD1 1489 aa25.74■■□□□ 1.71
HNRNPA1-205ENST00000547566 PPP6R1Q9UPN7 881 aa25.74■■□□□ 1.71
HNRNPA1-205ENST00000547566 CCDC141Q6ZP82 1450 aa25.73■■□□□ 1.71
HNRNPA1-205ENST00000547566 PTPRKQ15262 1439 aa25.73■■□□□ 1.71
HNRNPA1-205ENST00000547566 DHX29Q7Z478 1369 aaKnown RBP25.71■■□□□ 1.71
HNRNPA1-205ENST00000547566 VPS8Q8N3P4 1428 aa25.7■■□□□ 1.7
HNRNPA1-205ENST00000547566 CEP170BQ9Y4F5 1589 aaPredicted RBP25.69■■□□□ 1.7
HNRNPA1-205ENST00000547566 LOC105371045A0A1W2PR82 267 aa25.69■■□□□ 1.7
HNRNPA1-205ENST00000547566 LTBP4Q8N2S1 1624 aa25.69■■□□□ 1.7
HNRNPA1-205ENST00000547566 RSPH4AQ5TD94 716 aa25.68■■□□□ 1.7
HNRNPA1-205ENST00000547566 ARHGEF5Q12774 1597 aa25.68■■□□□ 1.7
HNRNPA1-205ENST00000547566 LRRC9Q6ZRR7 1453 aa25.66■■□□□ 1.7
HNRNPA1-205ENST00000547566 PLA2R1Q13018 1463 aa25.64■■□□□ 1.69
HNRNPA1-205ENST00000547566 KIF3BO15066 747 aa25.63■■□□□ 1.69
HNRNPA1-205ENST00000547566 NCKAP5LQ9HCH0 1330 aa25.63■■□□□ 1.69
HNRNPA1-205ENST00000547566 FAM135AQ9P2D6 1515 aa25.61■■□□□ 1.69
HNRNPA1-205ENST00000547566 TCOF1Q13428 1488 aaKnown RBP25.6■■□□□ 1.69
HNRNPA1-205ENST00000547566 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms