RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 FBXO41Q8TF61 875 aa19.32■□□□□ 0.68
HDAC7-226ENST00000547259 CLIP1P30622 1438 aa19.32■□□□□ 0.68
HDAC7-226ENST00000547259 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
HDAC7-226ENST00000547259 RIMS1Q86UR5 1692 aaKnown RBP19.3■□□□□ 0.68
HDAC7-226ENST00000547259 SCAPERQ9BY12 1400 aa19.29■□□□□ 0.68
HDAC7-226ENST00000547259 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
HDAC7-226ENST00000547259 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
HDAC7-226ENST00000547259 LMTK3Q96Q04 1460 aa19.27■□□□□ 0.67
HDAC7-226ENST00000547259 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
HDAC7-226ENST00000547259 ATP10AO60312 1499 aa19.24■□□□□ 0.67
HDAC7-226ENST00000547259 KIF14Q15058 1648 aa19.24■□□□□ 0.67
HDAC7-226ENST00000547259 FER1L4A9Z1Z3 1794 aa19.22■□□□□ 0.67
HDAC7-226ENST00000547259 TROQ12816 1431 aaPredicted RBP19.22■□□□□ 0.67
HDAC7-226ENST00000547259 ZNF518AQ6AHZ1 1483 aa19.21■□□□□ 0.67
HDAC7-226ENST00000547259 C9orf84Q5VXU9 1444 aa19.2■□□□□ 0.66
HDAC7-226ENST00000547259 MLECQ14165 292 aa19.2■□□□□ 0.66
HDAC7-226ENST00000547259 SETD1BQ9UPS6 1966 aaKnown RBP19.19■□□□□ 0.66
HDAC7-226ENST00000547259 ARHGAP5Q13017 1502 aa19.18■□□□□ 0.66
HDAC7-226ENST00000547259 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
HDAC7-226ENST00000547259 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
HDAC7-226ENST00000547259 ARHGEF12Q9NZN5 1544 aa19.15■□□□□ 0.66
HDAC7-226ENST00000547259 CCDC18Q5T9S5 1454 aa19.15■□□□□ 0.66
HDAC7-226ENST00000547259 SIGLEC1Q9BZZ2 1709 aa19.14■□□□□ 0.66
HDAC7-226ENST00000547259 HSPA2P54652 639 aa19.13■□□□□ 0.65
HDAC7-226ENST00000547259 KDM5CP41229 1560 aa19.13■□□□□ 0.65
HDAC7-226ENST00000547259 AFAP1Q8N556 730 aa19.12■□□□□ 0.65
HDAC7-226ENST00000547259 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
HDAC7-226ENST00000547259 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
HDAC7-226ENST00000547259 PREX1Q8TCU6 1659 aa19.11■□□□□ 0.65
HDAC7-226ENST00000547259 REREQ9P2R6 1566 aa19.1■□□□□ 0.65
HDAC7-226ENST00000547259 MLH3Q9UHC1 1453 aa19.09■□□□□ 0.65
HDAC7-226ENST00000547259 LRRIQ1Q96JM4 1722 aa19.09■□□□□ 0.65
HDAC7-226ENST00000547259 CDC42BPBQ9Y5S2 1711 aa19.09■□□□□ 0.65
HDAC7-226ENST00000547259 ESF1Q9H501 851 aaKnown RBP19.09■□□□□ 0.65
HDAC7-226ENST00000547259 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.64
HDAC7-226ENST00000547259 PREX2Q70Z35 1606 aa19.07■□□□□ 0.64
HDAC7-226ENST00000547259 FYCO1Q9BQS8 1478 aa19.04■□□□□ 0.64
HDAC7-226ENST00000547259 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
HDAC7-226ENST00000547259 CERKQ8TCT0 537 aa19.04■□□□□ 0.64
HDAC7-226ENST00000547259 DIP2CQ9Y2E4 1556 aa19.04■□□□□ 0.64
HDAC7-226ENST00000547259 AGLP35573 1532 aa19.03■□□□□ 0.64
HDAC7-226ENST00000547259 ABCC1P33527 1531 aa19.02■□□□□ 0.64
HDAC7-226ENST00000547259 CEBPAP49715 358 aaPredicted RBP19.02■□□□□ 0.64
HDAC7-226ENST00000547259 ITSN2Q9NZM3 1697 aa19.01■□□□□ 0.63
HDAC7-226ENST00000547259 CDC42BPAQ5VT25 1732 aa19■□□□□ 0.63
HDAC7-226ENST00000547259 CNTLNQ9NXG0 1405 aa19■□□□□ 0.63
HDAC7-226ENST00000547259 ABCA6Q8N139 1617 aa18.99■□□□□ 0.63
HDAC7-226ENST00000547259 TRAPPC8Q9Y2L5 1435 aa18.99■□□□□ 0.63
HDAC7-226ENST00000547259 KIDINS220Q9ULH0 1771 aa18.96■□□□□ 0.63
HDAC7-226ENST00000547259 C3P01024 1663 aa18.95■□□□□ 0.62
HDAC7-226ENST00000547259 PLEKHH2Q8IVE3 1493 aa18.95■□□□□ 0.62
HDAC7-226ENST00000547259 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
HDAC7-226ENST00000547259 SPAG9O60271 1321 aaKnown RBP18.94■□□□□ 0.62
HDAC7-226ENST00000547259 STRCQ7RTU9 1775 aa18.93■□□□□ 0.62
HDAC7-226ENST00000547259 PTPRTO14522 1441 aa18.91■□□□□ 0.62
HDAC7-226ENST00000547259 KIAA1107Q9UPP5 1409 aa18.91■□□□□ 0.62
HDAC7-226ENST00000547259 GPATCH8Q9UKJ3 1502 aaKnown RBP18.91■□□□□ 0.62
HDAC7-226ENST00000547259 SAMD9LQ8IVG5 1584 aa18.91■□□□□ 0.62
HDAC7-226ENST00000547259 CFDP1Q9UEE9 299 aaPredicted RBP18.91■□□□□ 0.62
HDAC7-226ENST00000547259 TIAM1Q13009 1591 aa18.9■□□□□ 0.62
HDAC7-226ENST00000547259 MROH2AA6NES4 1674 aa18.89■□□□□ 0.61
HDAC7-226ENST00000547259 CCNB3Q8WWL7 1395 aa18.89■□□□□ 0.61
HDAC7-226ENST00000547259 NPATQ14207 1427 aa18.89■□□□□ 0.61
HDAC7-226ENST00000547259 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
HDAC7-226ENST00000547259 HNRNPMP52272 730 aaKnown RBP eCLIP18.87■□□□□ 0.61
HDAC7-226ENST00000547259 SYCP2Q9BX26 1530 aa18.87■□□□□ 0.61
HDAC7-226ENST00000547259 PPP6R1Q9UPN7 881 aa18.87■□□□□ 0.61
HDAC7-226ENST00000547259 MAP3K1Q13233 1512 aa18.85■□□□□ 0.61
HDAC7-226ENST00000547259 ATP7AQ04656 1500 aa18.84■□□□□ 0.61
HDAC7-226ENST00000547259 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
HDAC7-226ENST00000547259 SUPT6HQ7KZ85 1726 aaKnown RBP18.84■□□□□ 0.61
HDAC7-226ENST00000547259 APLP2Q06481 763 aa18.84■□□□□ 0.61
HDAC7-226ENST00000547259 A2MP01023 1474 aa18.83■□□□□ 0.6
HDAC7-226ENST00000547259 NCOA1Q15788 1441 aa18.81■□□□□ 0.6
HDAC7-226ENST00000547259 EHBP1L1Q8N3D4 1523 aa18.8■□□□□ 0.6
HDAC7-226ENST00000547259 ADGBQ8N7X0 1667 aa18.8■□□□□ 0.6
HDAC7-226ENST00000547259 IQSEC2Q5JU85 1478 aa18.8■□□□□ 0.6
HDAC7-226ENST00000547259 INO80Q9ULG1 1556 aaPredicted RBP18.8■□□□□ 0.6
HDAC7-226ENST00000547259 PLXNC1O60486 1568 aa18.79■□□□□ 0.6
HDAC7-226ENST00000547259 GGT6Q6P531 493 aa18.78■□□□□ 0.6
HDAC7-226ENST00000547259 PKD2Q13563 968 aa18.77■□□□□ 0.6
HDAC7-226ENST00000547259 RSPH4AQ5TD94 716 aa18.77■□□□□ 0.6
HDAC7-226ENST00000547259 CLTCQ00610 1675 aaKnown RBP18.76■□□□□ 0.59
HDAC7-226ENST00000547259 RTEL1-TNFRSF6BF6WH68 1400 aa18.76■□□□□ 0.59
HDAC7-226ENST00000547259 CAMSAP1Q5T5Y3 1602 aa18.76■□□□□ 0.59
HDAC7-226ENST00000547259 LRRC9Q6ZRR7 1453 aa18.76■□□□□ 0.59
HDAC7-226ENST00000547259 ZNF142P52746 1687 aaPredicted RBP18.73■□□□□ 0.59
HDAC7-226ENST00000547259 PLA2R1Q13018 1463 aa18.72■□□□□ 0.59
HDAC7-226ENST00000547259 LTBP4Q8N2S1 1624 aa18.72■□□□□ 0.59
HDAC7-226ENST00000547259 PTPRKQ15262 1439 aa18.71■□□□□ 0.59
HDAC7-226ENST00000547259 MBD5Q9P267 1494 aa18.71■□□□□ 0.59
HDAC7-226ENST00000547259 DHX29Q7Z478 1369 aaKnown RBP18.7■□□□□ 0.58
HDAC7-226ENST00000547259 MYO3AQ8NEV4 1616 aa18.7■□□□□ 0.58
HDAC7-226ENST00000547259 CEP170BQ9Y4F5 1589 aaPredicted RBP18.69■□□□□ 0.58
HDAC7-226ENST00000547259 KANK4Q5T7N3 995 aaPredicted RBP18.69■□□□□ 0.58
HDAC7-226ENST00000547259 ZNF644Q9H582 1327 aaPredicted RBP18.69■□□□□ 0.58
HDAC7-226ENST00000547259 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
HDAC7-226ENST00000547259 NCKAP5LQ9HCH0 1330 aa18.68■□□□□ 0.58
HDAC7-226ENST00000547259 DISP3Q9P2K9 1392 aa18.68■□□□□ 0.58
HDAC7-226ENST00000547259 CCDC141Q6ZP82 1450 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms