RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
TROAP-204ENST00000546776 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
TROAP-204ENST00000546776 ITSN2Q9NZM3 1697 aa17.22■□□□□ 0.35
TROAP-204ENST00000546776 DENND4BO75064 1496 aaPredicted RBP17.21■□□□□ 0.35
TROAP-204ENST00000546776 MYO5CQ9NQX4 1742 aa17.21■□□□□ 0.35
TROAP-204ENST00000546776 CCNB3Q8WWL7 1395 aa17.2■□□□□ 0.34
TROAP-204ENST00000546776 RAPGEF3O95398 923 aa17.2■□□□□ 0.34
TROAP-204ENST00000546776 ARHGAP5Q13017 1502 aa17.18■□□□□ 0.34
TROAP-204ENST00000546776 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
TROAP-204ENST00000546776 ADGRL1O94910 1474 aa17.17■□□□□ 0.34
TROAP-204ENST00000546776 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
TROAP-204ENST00000546776 SCAPERQ9BY12 1400 aa17.15■□□□□ 0.34
TROAP-204ENST00000546776 PREX2Q70Z35 1606 aa17.14■□□□□ 0.33
TROAP-204ENST00000546776 MIA2Q96PC5 1412 aa17.13■□□□□ 0.33
TROAP-204ENST00000546776 GPATCH8Q9UKJ3 1502 aaKnown RBP17.12■□□□□ 0.33
TROAP-204ENST00000546776 FGD6Q6ZV73 1430 aa17.11■□□□□ 0.33
TROAP-204ENST00000546776 RRBP1Q9P2E9 1410 aaKnown RBP17.11■□□□□ 0.33
TROAP-204ENST00000546776 TRIM26Q12899 539 aaPredicted RBP17.1■□□□□ 0.33
TROAP-204ENST00000546776 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
TROAP-204ENST00000546776 POGZQ7Z3K3 1410 aa17.1■□□□□ 0.33
TROAP-204ENST00000546776 CDC42BPBQ9Y5S2 1711 aa17.1■□□□□ 0.33
TROAP-204ENST00000546776 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
TROAP-204ENST00000546776 MAGI2Q86UL8 1455 aa17.09■□□□□ 0.33
TROAP-204ENST00000546776 FRMPD1Q5SYB0 1578 aa17.09■□□□□ 0.33
TROAP-204ENST00000546776 PTPN23Q9H3S7 1636 aa17.09■□□□□ 0.33
TROAP-204ENST00000546776 RICTORQ6R327 1708 aa17.09■□□□□ 0.33
TROAP-204ENST00000546776 ZNF518AQ6AHZ1 1483 aa17.08■□□□□ 0.32
TROAP-204ENST00000546776 KDM4FA0A1W2PPD8 638 aa17.08■□□□□ 0.32
TROAP-204ENST00000546776 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.32
TROAP-204ENST00000546776 ZMYM4Q5VZL5 1548 aa17.07■□□□□ 0.32
TROAP-204ENST00000546776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
TROAP-204ENST00000546776 ARID4BQ4LE39 1312 aaPredicted RBP17.06■□□□□ 0.32
TROAP-204ENST00000546776 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
TROAP-204ENST00000546776 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
TROAP-204ENST00000546776 PLEKHH2Q8IVE3 1493 aa17.05■□□□□ 0.32
TROAP-204ENST00000546776 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
TROAP-204ENST00000546776 AFAP1Q8N556 730 aa17.04■□□□□ 0.32
TROAP-204ENST00000546776 ABCC1P33527 1531 aa17.03■□□□□ 0.32
TROAP-204ENST00000546776 ARHGEF40Q8TER5 1519 aa17.03■□□□□ 0.32
TROAP-204ENST00000546776 CAMSAP2Q08AD1 1489 aa17.02■□□□□ 0.32
TROAP-204ENST00000546776 KIAA1107Q9UPP5 1409 aa17.01■□□□□ 0.31
TROAP-204ENST00000546776 SAMD9LQ8IVG5 1584 aa17■□□□□ 0.31
TROAP-204ENST00000546776 KDM5CP41229 1560 aa16.98■□□□□ 0.31
TROAP-204ENST00000546776 YEATS2Q9ULM3 1422 aa16.98■□□□□ 0.31
TROAP-204ENST00000546776 TRAPPC8Q9Y2L5 1435 aa16.98■□□□□ 0.31
TROAP-204ENST00000546776 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
TROAP-204ENST00000546776 ATP10AO60312 1499 aa16.98■□□□□ 0.31
TROAP-204ENST00000546776 MLH3Q9UHC1 1453 aa16.97■□□□□ 0.31
TROAP-204ENST00000546776 HECW2Q9P2P5 1572 aa16.97■□□□□ 0.31
TROAP-204ENST00000546776 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.31
TROAP-204ENST00000546776 SYCP2Q9BX26 1530 aa16.96■□□□□ 0.31
TROAP-204ENST00000546776 ARHGEF12Q9NZN5 1544 aa16.96■□□□□ 0.31
TROAP-204ENST00000546776 RSPH4AQ5TD94 716 aa16.96■□□□□ 0.31
TROAP-204ENST00000546776 DNMT1P26358 1616 aaKnown RBP16.96■□□□□ 0.3
TROAP-204ENST00000546776 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.3
TROAP-204ENST00000546776 ZNF644Q9H582 1327 aaPredicted RBP16.96■□□□□ 0.3
TROAP-204ENST00000546776 ARHGEF5Q12774 1597 aa16.94■□□□□ 0.3
TROAP-204ENST00000546776 CROCC2H7BZ55 1655 aa16.92■□□□□ 0.3
TROAP-204ENST00000546776 PCGF6Q9BYE7 350 aa16.92■□□□□ 0.3
TROAP-204ENST00000546776 DAPK1P53355 1430 aa16.92■□□□□ 0.3
TROAP-204ENST00000546776 CCDC141Q6ZP82 1450 aa16.92■□□□□ 0.3
TROAP-204ENST00000546776 ITGAEP38570 1179 aa16.91■□□□□ 0.3
TROAP-204ENST00000546776 MBD5Q9P267 1494 aa16.9■□□□□ 0.3
TROAP-204ENST00000546776 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
TROAP-204ENST00000546776 SHANK2Q9UPX8 1470 aa16.89■□□□□ 0.29
TROAP-204ENST00000546776 TSPY4P0CV99 314 aa16.89■□□□□ 0.29
TROAP-204ENST00000546776 TSPY10P0CW01 314 aa16.89■□□□□ 0.29
TROAP-204ENST00000546776 MLECQ14165 292 aa16.89■□□□□ 0.29
TROAP-204ENST00000546776 ABCC5O15440 1437 aa16.88■□□□□ 0.29
TROAP-204ENST00000546776 DIP2CQ9Y2E4 1556 aa16.88■□□□□ 0.29
TROAP-204ENST00000546776 ADAMTSL3P82987 1691 aa16.88■□□□□ 0.29
TROAP-204ENST00000546776 ADGBQ8N7X0 1667 aa16.88■□□□□ 0.29
TROAP-204ENST00000546776 REREQ9P2R6 1566 aa16.87■□□□□ 0.29
TROAP-204ENST00000546776 ABCA6Q8N139 1617 aa16.86■□□□□ 0.29
TROAP-204ENST00000546776 ATP7AQ04656 1500 aa16.86■□□□□ 0.29
TROAP-204ENST00000546776 KIDINS220Q9ULH0 1771 aa16.85■□□□□ 0.29
TROAP-204ENST00000546776 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
TROAP-204ENST00000546776 RTEL1-TNFRSF6BF6WH68 1400 aa16.85■□□□□ 0.29
TROAP-204ENST00000546776 MAST1Q9Y2H9 1570 aa16.85■□□□□ 0.29
TROAP-204ENST00000546776 PTPRMP28827 1452 aa16.84■□□□□ 0.29
TROAP-204ENST00000546776 AGLP35573 1532 aa16.83■□□□□ 0.28
TROAP-204ENST00000546776 ROCK1Q13464 1354 aa16.83■□□□□ 0.28
TROAP-204ENST00000546776 MADDQ8WXG6 1647 aa16.82■□□□□ 0.28
TROAP-204ENST00000546776 INO80Q9ULG1 1556 aaPredicted RBP16.82■□□□□ 0.28
TROAP-204ENST00000546776 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
TROAP-204ENST00000546776 ADGRL2O95490 1459 aa16.81■□□□□ 0.28
TROAP-204ENST00000546776 A2MP01023 1474 aa16.81■□□□□ 0.28
TROAP-204ENST00000546776 PTPRKQ15262 1439 aa16.81■□□□□ 0.28
TROAP-204ENST00000546776 CHIC2Q9UKJ5 165 aa16.8■□□□□ 0.28
TROAP-204ENST00000546776 PLXNC1O60486 1568 aa16.79■□□□□ 0.28
TROAP-204ENST00000546776 SIGLEC1Q9BZZ2 1709 aa16.79■□□□□ 0.28
TROAP-204ENST00000546776 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
TROAP-204ENST00000546776 GCC2Q8IWJ2 1684 aa16.78■□□□□ 0.28
TROAP-204ENST00000546776 HFM1A2PYH4 1435 aa16.78■□□□□ 0.28
TROAP-204ENST00000546776 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
TROAP-204ENST00000546776 NCOA1Q15788 1441 aa16.77■□□□□ 0.27
TROAP-204ENST00000546776 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.27
TROAP-204ENST00000546776 DHX29Q7Z478 1369 aaKnown RBP16.76■□□□□ 0.27
TROAP-204ENST00000546776 CNTLNQ9NXG0 1405 aa16.75■□□□□ 0.27
TROAP-204ENST00000546776 SETD5Q9C0A6 1442 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms