RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 DIP2BQ9P265 1576 aa16.45■□□□□ 0.22
DDB1-224ENST00000545894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.44■□□□□ 0.22
DDB1-224ENST00000545894 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
DDB1-224ENST00000545894 GLI2P10070 1586 aa16.42■□□□□ 0.22
DDB1-224ENST00000545894 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
DDB1-224ENST00000545894 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
DDB1-224ENST00000545894 TTC37Q6PGP7 1564 aa16.41■□□□□ 0.22
DDB1-224ENST00000545894 ABCA9Q8IUA7 1624 aa16.4■□□□□ 0.22
DDB1-224ENST00000545894 SUPT6HQ7KZ85 1726 aaKnown RBP16.4■□□□□ 0.22
DDB1-224ENST00000545894 CD109Q6YHK3 1445 aa16.39■□□□□ 0.21
DDB1-224ENST00000545894 KIF13AQ9H1H9 1805 aa16.39■□□□□ 0.21
DDB1-224ENST00000545894 PHLDB1Q86UU1 1377 aa16.37■□□□□ 0.21
DDB1-224ENST00000545894 GPATCH8Q9UKJ3 1502 aaKnown RBP16.37■□□□□ 0.21
DDB1-224ENST00000545894 MAP3K4Q9Y6R4 1608 aa16.36■□□□□ 0.21
DDB1-224ENST00000545894 PLCH2O75038 1416 aa16.35■□□□□ 0.21
DDB1-224ENST00000545894 CFDP1Q9UEE9 299 aaPredicted RBP16.31■□□□□ 0.2
DDB1-224ENST00000545894 CDC42BPAQ5VT25 1732 aa16.31■□□□□ 0.2
DDB1-224ENST00000545894 MYOM3Q5VTT5 1437 aa16.31■□□□□ 0.2
DDB1-224ENST00000545894 MYO5CQ9NQX4 1742 aa16.3■□□□□ 0.2
DDB1-224ENST00000545894 TIMELESSQ9UNS1 1208 aa16.3■□□□□ 0.2
DDB1-224ENST00000545894 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
DDB1-224ENST00000545894 PREX2Q70Z35 1606 aa16.3■□□□□ 0.2
DDB1-224ENST00000545894 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
DDB1-224ENST00000545894 EFCAB2Q5VUJ9 269 aa16.29■□□□□ 0.2
DDB1-224ENST00000545894 TSHZ2Q9NRE2 1034 aa16.29■□□□□ 0.2
DDB1-224ENST00000545894 CDC42BPBQ9Y5S2 1711 aa16.29■□□□□ 0.2
DDB1-224ENST00000545894 PPRC1Q5VV67 1664 aaKnown RBP16.29■□□□□ 0.2
DDB1-224ENST00000545894 ZNF777Q9ULD5 760 aaPredicted RBP16.29■□□□□ 0.2
DDB1-224ENST00000545894 ARAP3Q8WWN8 1544 aa16.28■□□□□ 0.2
DDB1-224ENST00000545894 TSPOAP1O95153 1857 aa16.28■□□□□ 0.2
DDB1-224ENST00000545894 FANCAO15360 1455 aa16.28■□□□□ 0.2
DDB1-224ENST00000545894 ZNF644Q9H582 1327 aaPredicted RBP16.28■□□□□ 0.2
DDB1-224ENST00000545894 SIN3AQ96ST3 1273 aa16.28■□□□□ 0.2
DDB1-224ENST00000545894 FGD6Q6ZV73 1430 aa16.27■□□□□ 0.19
DDB1-224ENST00000545894 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.19
DDB1-224ENST00000545894 DDX10Q13206 875 aaKnown RBP16.26■□□□□ 0.19
DDB1-224ENST00000545894 MIA2Q96PC5 1412 aa16.26■□□□□ 0.19
DDB1-224ENST00000545894 TEX14Q8IWB6 1497 aa16.25■□□□□ 0.19
DDB1-224ENST00000545894 AKNAQ7Z591 1439 aa16.25■□□□□ 0.19
DDB1-224ENST00000545894 NEO1Q92859 1461 aa16.24■□□□□ 0.19
DDB1-224ENST00000545894 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
DDB1-224ENST00000545894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.23■□□□□ 0.19
DDB1-224ENST00000545894 SAMD9LQ8IVG5 1584 aa16.23■□□□□ 0.19
DDB1-224ENST00000545894 CAMSAP2Q08AD1 1489 aa16.21■□□□□ 0.19
DDB1-224ENST00000545894 HNRNPMP52272 730 aaKnown RBP eCLIP16.21■□□□□ 0.19
DDB1-224ENST00000545894 PTPN23Q9H3S7 1636 aa16.21■□□□□ 0.19
DDB1-224ENST00000545894 CFAP74Q9C0B2 1584 aa16.21■□□□□ 0.18
DDB1-224ENST00000545894 TCOF1Q13428 1488 aaKnown RBP16.2■□□□□ 0.18
DDB1-224ENST00000545894 ARHGEF12Q9NZN5 1544 aa16.2■□□□□ 0.18
DDB1-224ENST00000545894 ADGRL1O94910 1474 aa16.2■□□□□ 0.18
DDB1-224ENST00000545894 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
DDB1-224ENST00000545894 CCER2I3L3R5 266 aa16.18■□□□□ 0.18
DDB1-224ENST00000545894 ABCC1P33527 1531 aa16.18■□□□□ 0.18
DDB1-224ENST00000545894 KIAA1107Q9UPP5 1409 aa16.18■□□□□ 0.18
DDB1-224ENST00000545894 COL17A1Q9UMD9 1497 aaPredicted RBP16.18■□□□□ 0.18
DDB1-224ENST00000545894 PLEKHH2Q8IVE3 1493 aa16.17■□□□□ 0.18
DDB1-224ENST00000545894 MBD5Q9P267 1494 aa16.17■□□□□ 0.18
DDB1-224ENST00000545894 SYCP2Q9BX26 1530 aa16.17■□□□□ 0.18
DDB1-224ENST00000545894 FKBP8Q14318 412 aa16.16■□□□□ 0.18
DDB1-224ENST00000545894 RAPGEF3O95398 923 aa16.16■□□□□ 0.18
DDB1-224ENST00000545894 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
DDB1-224ENST00000545894 AFAP1Q8N556 730 aa16.15■□□□□ 0.18
DDB1-224ENST00000545894 DENND4BO75064 1496 aaPredicted RBP16.14■□□□□ 0.17
DDB1-224ENST00000545894 ANP32CO43423 234 aa16.14■□□□□ 0.17
DDB1-224ENST00000545894 BCANQ96GW7 911 aa16.14■□□□□ 0.17
DDB1-224ENST00000545894 POGZQ7Z3K3 1410 aa16.12■□□□□ 0.17
DDB1-224ENST00000545894 ABCC5O15440 1437 aa16.12■□□□□ 0.17
DDB1-224ENST00000545894 NEFLP07196 543 aa16.11■□□□□ 0.17
DDB1-224ENST00000545894 RSPH4AQ5TD94 716 aa16.11■□□□□ 0.17
DDB1-224ENST00000545894 HIRIP3Q9BW71 556 aaPredicted RBP16.11■□□□□ 0.17
DDB1-224ENST00000545894 TONSLQ96HA7 1378 aa16.11■□□□□ 0.17
DDB1-224ENST00000545894 ANP32EQ9BTT0 268 aa16.11■□□□□ 0.17
DDB1-224ENST00000545894 ARHGEF5Q12774 1597 aa16.11■□□□□ 0.17
DDB1-224ENST00000545894 CCDC141Q6ZP82 1450 aa16.1■□□□□ 0.17
DDB1-224ENST00000545894 DAPK1P53355 1430 aa16.1■□□□□ 0.17
DDB1-224ENST00000545894 ZNF518AQ6AHZ1 1483 aa16.09■□□□□ 0.17
DDB1-224ENST00000545894 FRMPD1Q5SYB0 1578 aa16.09■□□□□ 0.17
DDB1-224ENST00000545894 PTPRKQ15262 1439 aa16.09■□□□□ 0.17
DDB1-224ENST00000545894 KDM6BO15054 1643 aa16.09■□□□□ 0.17
DDB1-224ENST00000545894 HFM1A2PYH4 1435 aa16.08■□□□□ 0.16
DDB1-224ENST00000545894 RICTORQ6R327 1708 aa16.08■□□□□ 0.16
DDB1-224ENST00000545894 DNMT1P26358 1616 aaKnown RBP16.08■□□□□ 0.16
DDB1-224ENST00000545894 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
DDB1-224ENST00000545894 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
DDB1-224ENST00000545894 SPAG9O60271 1321 aaKnown RBP16.07■□□□□ 0.16
DDB1-224ENST00000545894 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
DDB1-224ENST00000545894 KDM5CP41229 1560 aa16.06■□□□□ 0.16
DDB1-224ENST00000545894 TRIM52Q96A61 297 aa16.06■□□□□ 0.16
DDB1-224ENST00000545894 C9orf84Q5VXU9 1444 aa16.04■□□□□ 0.16
DDB1-224ENST00000545894 MYT1LQ9UL68 1186 aa16.04■□□□□ 0.16
DDB1-224ENST00000545894 MLH3Q9UHC1 1453 aa16.03■□□□□ 0.16
DDB1-224ENST00000545894 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
DDB1-224ENST00000545894 ZMYM4Q5VZL5 1548 aa16.02■□□□□ 0.16
DDB1-224ENST00000545894 CROCC2H7BZ55 1655 aa16.02■□□□□ 0.15
DDB1-224ENST00000545894 RTEL1-TNFRSF6BF6WH68 1400 aa16.02■□□□□ 0.15
DDB1-224ENST00000545894 MAST1Q9Y2H9 1570 aa16.01■□□□□ 0.15
DDB1-224ENST00000545894 NAIPQ13075 1403 aa16.01■□□□□ 0.15
DDB1-224ENST00000545894 ZFYVE16Q7Z3T8 1539 aa16.01■□□□□ 0.15
DDB1-224ENST00000545894 YEATS2Q9ULM3 1422 aa16.01■□□□□ 0.15
DDB1-224ENST00000545894 HECW2Q9P2P5 1572 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms