RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 PRG4Q92954 1404 aaPredicted RBP13.72□□□□□ -0.21
DDX11-229ENST00000545668 ZNF644Q9H582 1327 aaPredicted RBP13.72□□□□□ -0.21
DDX11-229ENST00000545668 TONSLQ96HA7 1378 aa13.72□□□□□ -0.21
DDX11-229ENST00000545668 CNGB1Q14028 1251 aaPredicted RBP13.72□□□□□ -0.21
DDX11-229ENST00000545668 CFDP1Q9UEE9 299 aaPredicted RBP13.72□□□□□ -0.21
DDX11-229ENST00000545668 ZNF777Q9ULD5 760 aaPredicted RBP13.72□□□□□ -0.21
DDX11-229ENST00000545668 FKBP8Q14318 412 aa13.71□□□□□ -0.21
DDX11-229ENST00000545668 PLEKHD1A6NEE1 506 aa13.71□□□□□ -0.22
DDX11-229ENST00000545668 TROQ12816 1431 aaPredicted RBP13.7□□□□□ -0.22
DDX11-229ENST00000545668 PPP1R15AO75807 674 aaPredicted RBP13.7□□□□□ -0.22
DDX11-229ENST00000545668 DAPK1P53355 1430 aa13.66□□□□□ -0.22
DDX11-229ENST00000545668 PTPRGP23470 1445 aa13.65□□□□□ -0.22
DDX11-229ENST00000545668 AKNAQ7Z591 1439 aa13.65□□□□□ -0.22
DDX11-229ENST00000545668 ABCC5O15440 1437 aa13.64□□□□□ -0.23
DDX11-229ENST00000545668 MPHOSPH9Q99550 1183 aa13.64□□□□□ -0.23
DDX11-229ENST00000545668 ROCK1Q13464 1354 aa13.62□□□□□ -0.23
DDX11-229ENST00000545668 GPATCH8Q9UKJ3 1502 aaKnown RBP13.61□□□□□ -0.23
DDX11-229ENST00000545668 ANP32CO43423 234 aa13.61□□□□□ -0.23
DDX11-229ENST00000545668 ATP10BO94823 1461 aa13.61□□□□□ -0.23
DDX11-229ENST00000545668 GCC2Q8IWJ2 1684 aa13.61□□□□□ -0.23
DDX11-229ENST00000545668 FOXD1Q16676 465 aa13.6□□□□□ -0.23
DDX11-229ENST00000545668 CAMSAP2Q08AD1 1489 aa13.6□□□□□ -0.23
DDX11-229ENST00000545668 ABCA8O94911 1581 aa13.59□□□□□ -0.23
DDX11-229ENST00000545668 KDM6BO15054 1643 aa13.59□□□□□ -0.23
DDX11-229ENST00000545668 KIF14Q15058 1648 aa13.59□□□□□ -0.23
DDX11-229ENST00000545668 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
DDX11-229ENST00000545668 DNMT1P26358 1616 aaKnown RBP13.59□□□□□ -0.23
DDX11-229ENST00000545668 IRX6P78412 446 aaPredicted RBP13.56□□□□□ -0.24
DDX11-229ENST00000545668 ITSN2Q9NZM3 1697 aa13.56□□□□□ -0.24
DDX11-229ENST00000545668 CHD1O14646 1710 aa13.56□□□□□ -0.24
DDX11-229ENST00000545668 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
DDX11-229ENST00000545668 TSPY4P0CV99 314 aa13.55□□□□□ -0.24
DDX11-229ENST00000545668 TSPY10P0CW01 314 aa13.55□□□□□ -0.24
DDX11-229ENST00000545668 EIF5BO60841 1220 aaKnown RBP13.55□□□□□ -0.24
DDX11-229ENST00000545668 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
DDX11-229ENST00000545668 RTN4Q9NQC3 1192 aaKnown RBP13.54□□□□□ -0.24
DDX11-229ENST00000545668 ANKRD30AQ9BXX3 1397 aa13.54□□□□□ -0.24
DDX11-229ENST00000545668 TSHZ2Q9NRE2 1034 aa13.54□□□□□ -0.24
DDX11-229ENST00000545668 ADCY10Q96PN6 1610 aa13.54□□□□□ -0.24
DDX11-229ENST00000545668 NCOA1Q15788 1441 aa13.54□□□□□ -0.24
DDX11-229ENST00000545668 DENND4BO75064 1496 aaPredicted RBP13.53□□□□□ -0.24
DDX11-229ENST00000545668 HNRNPMP52272 730 aaKnown RBP eCLIP13.52□□□□□ -0.25
DDX11-229ENST00000545668 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
DDX11-229ENST00000545668 ABCC10Q5T3U5 1492 aa13.51□□□□□ -0.25
DDX11-229ENST00000545668 HNRNPUQ00839 825 aaKnown RBP eCLIP13.49□□□□□ -0.25
DDX11-229ENST00000545668 NBR1Q14596 966 aa13.49□□□□□ -0.25
DDX11-229ENST00000545668 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
DDX11-229ENST00000545668 ANKRD50Q9ULJ7 1429 aa13.48□□□□□ -0.25
DDX11-229ENST00000545668 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
DDX11-229ENST00000545668 PKD2Q13563 968 aa13.47□□□□□ -0.25
DDX11-229ENST00000545668 CDC42BPAQ5VT25 1732 aa13.47□□□□□ -0.25
DDX11-229ENST00000545668 ADGRL2O95490 1459 aa13.46□□□□□ -0.25
DDX11-229ENST00000545668 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.26
DDX11-229ENST00000545668 EIF4G2P78344 907 aaKnown RBP eCLIP13.45□□□□□ -0.26
DDX11-229ENST00000545668 ANO8Q9HCE9 1232 aaPredicted RBP13.45□□□□□ -0.26
DDX11-229ENST00000545668 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
DDX11-229ENST00000545668 HSPA5P11021 654 aaKnown RBP13.45□□□□□ -0.26
DDX11-229ENST00000545668 NUP155O75694 1391 aa13.45□□□□□ -0.26
DDX11-229ENST00000545668 KDM5BQ9UGL1 1544 aa13.44□□□□□ -0.26
DDX11-229ENST00000545668 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
DDX11-229ENST00000545668 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
DDX11-229ENST00000545668 SENP3-EIF4A1A0A087X0R7 540 aa13.44□□□□□ -0.26
DDX11-229ENST00000545668 RPRD2Q5VT52 1461 aaKnown RBP13.44□□□□□ -0.26
DDX11-229ENST00000545668 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
DDX11-229ENST00000545668 PZPP20742 1482 aa13.43□□□□□ -0.26
DDX11-229ENST00000545668 KIF15Q9NS87 1388 aa13.43□□□□□ -0.26
DDX11-229ENST00000545668 ABCC2Q92887 1545 aa13.42□□□□□ -0.26
DDX11-229ENST00000545668 SHANK2Q9UPX8 1470 aa13.42□□□□□ -0.26
DDX11-229ENST00000545668 CROCC2H7BZ55 1655 aa13.42□□□□□ -0.26
DDX11-229ENST00000545668 KIAA1107Q9UPP5 1409 aa13.41□□□□□ -0.26
DDX11-229ENST00000545668 ZNF326Q5BKZ1 582 aaKnown RBP13.41□□□□□ -0.26
DDX11-229ENST00000545668 ARHGAP5Q13017 1502 aa13.4□□□□□ -0.26
DDX11-229ENST00000545668 FAM9BQ8IZU0 186 aa13.4□□□□□ -0.26
DDX11-229ENST00000545668 NBPF8Q3BBV2 869 aa13.4□□□□□ -0.27
DDX11-229ENST00000545668 CCDC141Q6ZP82 1450 aa13.39□□□□□ -0.27
DDX11-229ENST00000545668 MBD5Q9P267 1494 aa13.39□□□□□ -0.27
DDX11-229ENST00000545668 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
DDX11-229ENST00000545668 ARHGEF5Q12774 1597 aa13.37□□□□□ -0.27
DDX11-229ENST00000545668 SAMD9LQ8IVG5 1584 aa13.37□□□□□ -0.27
DDX11-229ENST00000545668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDX11-229ENST00000545668 PREX2Q70Z35 1606 aa13.36□□□□□ -0.27
DDX11-229ENST00000545668 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
DDX11-229ENST00000545668 TEX14Q8IWB6 1497 aa13.36□□□□□ -0.27
DDX11-229ENST00000545668 TTC37Q6PGP7 1564 aa13.36□□□□□ -0.27
DDX11-229ENST00000545668 EFCAB2Q5VUJ9 269 aa13.36□□□□□ -0.27
DDX11-229ENST00000545668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■□□□ 11.4
DDX11-229ENST00000545668 CDC42BPBQ9Y5S2 1711 aa13.36□□□□□ -0.27
DDX11-229ENST00000545668 RBM19Q9Y4C8 960 aaKnown RBP13.35□□□□□ -0.27
DDX11-229ENST00000545668 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
DDX11-229ENST00000545668 CCER2I3L3R5 266 aa13.35□□□□□ -0.27
DDX11-229ENST00000545668 PLEKHH2Q8IVE3 1493 aa13.32□□□□□ -0.28
DDX11-229ENST00000545668 UHRF1BP1LA0JNW5 1464 aa13.32□□□□□ -0.28
DDX11-229ENST00000545668 RTL5Q5HYW3 569 aaPredicted RBP13.31□□□□□ -0.28
DDX11-229ENST00000545668 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
DDX11-229ENST00000545668 PLCH2O75038 1416 aa13.31□□□□□ -0.28
DDX11-229ENST00000545668 ZCCHC11Q5TAX3 1644 aaKnown RBP13.3□□□□□ -0.28
DDX11-229ENST00000545668 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
DDX11-229ENST00000545668 MYO5CQ9NQX4 1742 aa13.29□□□□□ -0.28
DDX11-229ENST00000545668 DCAF11Q8TEB1 546 aa13.28□□□□□ -0.28
DDX11-229ENST00000545668 DEKP35659 375 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms