RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 WRNQ14191 1432 aaPredicted RBP eCLIP7.51□□□□□ -1.21
SNHG1-220ENST00000544550 ADGRL1O94910 1474 aa7.5□□□□□ -1.21
SNHG1-220ENST00000544550 C7P10643 843 aa7.5□□□□□ -1.21
SNHG1-220ENST00000544550 SLC39A7Q92504 469 aa7.5□□□□□ -1.21
SNHG1-220ENST00000544550 HECW2Q9P2P5 1572 aa7.5□□□□□ -1.21
SNHG1-220ENST00000544550 ERICH3Q5RHP9 1530 aa7.48□□□□□ -1.21
SNHG1-220ENST00000544550 SCUBE2Q9NQ36 999 aa7.48□□□□□ -1.21
SNHG1-220ENST00000544550 METRNQ9UJH8 293 aa7.46□□□□□ -1.22
SNHG1-220ENST00000544550 ADCY10Q96PN6 1610 aa7.45□□□□□ -1.22
SNHG1-220ENST00000544550 KLHL34Q8N239 644 aa7.45□□□□□ -1.22
SNHG1-220ENST00000544550 PLCD3Q8N3E9 789 aa7.45□□□□□ -1.22
SNHG1-220ENST00000544550 SLC24A1O60721 1099 aa7.44□□□□□ -1.22
SNHG1-220ENST00000544550 MIER1Q8N108 512 aa7.44□□□□□ -1.22
SNHG1-220ENST00000544550 SPOCK2Q92563 424 aa7.44□□□□□ -1.22
SNHG1-220ENST00000544550 FAM163AQ96GL9 167 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-220ENST00000544550 RUSC2Q8N2Y8 1516 aa7.43□□□□□ -1.22
SNHG1-220ENST00000544550 PKD2Q13563 968 aa7.43□□□□□ -1.22
SNHG1-220ENST00000544550 PLB1Q6P1J6 1458 aa7.43□□□□□ -1.22
SNHG1-220ENST00000544550 GLI2P10070 1586 aa7.42□□□□□ -1.22
SNHG1-220ENST00000544550 ASTLQ6HA08 431 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-220ENST00000544550 TEX14Q8IWB6 1497 aa7.42□□□□□ -1.22
SNHG1-220ENST00000544550 CREBZFQ9NS37 354 aa7.41□□□□□ -1.22
SNHG1-220ENST00000544550 TOP2BQ02880 1626 aa7.41□□□□□ -1.22
SNHG1-220ENST00000544550 PTPRGP23470 1445 aa7.4□□□□□ -1.22
SNHG1-220ENST00000544550 ASXL2Q76L83 1435 aa7.4□□□□□ -1.22
SNHG1-220ENST00000544550 ABCC2Q92887 1545 aa7.4□□□□□ -1.22
SNHG1-220ENST00000544550 KIAA0586Q9BVV6 1533 aa7.4□□□□□ -1.22
SNHG1-220ENST00000544550 TSPOAP1O95153 1857 aa7.4□□□□□ -1.23
SNHG1-220ENST00000544550 LMTK3Q96Q04 1460 aa7.39□□□□□ -1.23
SNHG1-220ENST00000544550 PELP1Q8IZL8 1130 aaKnown RBP7.38□□□□□ -1.23
SNHG1-220ENST00000544550 PHF12Q96QT6 1004 aa7.38□□□□□ -1.23
SNHG1-220ENST00000544550 BIVM-ERCC5R4GMW8 1640 aa7.38□□□□□ -1.23
SNHG1-220ENST00000544550 COL17A1Q9UMD9 1497 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-220ENST00000544550 CARMIL2Q6F5E8 1435 aa7.37□□□□□ -1.23
SNHG1-220ENST00000544550 PLEKHG5O94827 1062 aa7.37□□□□□ -1.23
SNHG1-220ENST00000544550 ZBTB47Q9UFB7 747 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-220ENST00000544550 TNIKQ9UKE5 1360 aa7.36□□□□□ -1.23
SNHG1-220ENST00000544550 ATMINO43313 823 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-220ENST00000544550 LCE2DQ5TA82 110 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-220ENST00000544550 UHRF1BP1LA0JNW5 1464 aa7.36□□□□□ -1.23
SNHG1-220ENST00000544550 PPRC1Q5VV67 1664 aaKnown RBP7.35□□□□□ -1.23
SNHG1-220ENST00000544550 CDAN1Q8IWY9 1227 aa7.35□□□□□ -1.23
SNHG1-220ENST00000544550 EPRSP07814 1512 aaKnown RBP7.35□□□□□ -1.23
SNHG1-220ENST00000544550 SOCS7O14512 581 aa7.34□□□□□ -1.23
SNHG1-220ENST00000544550 UACAQ9BZF9 1416 aa7.34□□□□□ -1.23
SNHG1-220ENST00000544550 MAP3K4Q9Y6R4 1608 aa7.33□□□□□ -1.24
SNHG1-220ENST00000544550 TTBK1Q5TCY1 1321 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-220ENST00000544550 POTEJP0CG39 1038 aa7.32□□□□□ -1.24
SNHG1-220ENST00000544550 KDM5BQ9UGL1 1544 aa7.32□□□□□ -1.24
SNHG1-220ENST00000544550 ECM2O94769 699 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-220ENST00000544550 CUL7Q14999 1698 aa7.29□□□□□ -1.24
SNHG1-220ENST00000544550 MAGI3Q5TCQ9 1506 aa7.29□□□□□ -1.24
SNHG1-220ENST00000544550 MS4A3Q96HJ5 214 aa7.29□□□□□ -1.24
SNHG1-220ENST00000544550 IGF1RP08069 1367 aa7.29□□□□□ -1.24
SNHG1-220ENST00000544550 DISP3Q9P2K9 1392 aa7.29□□□□□ -1.24
SNHG1-220ENST00000544550 PTPRMP28827 1452 aa7.29□□□□□ -1.24
SNHG1-220ENST00000544550 KIF27Q86VH2 1401 aa7.28□□□□□ -1.24
SNHG1-220ENST00000544550 WDR7Q9Y4E6 1490 aa7.28□□□□□ -1.24
SNHG1-220ENST00000544550 CD109Q6YHK3 1445 aa7.27□□□□□ -1.24
SNHG1-220ENST00000544550 PCF11O94913 1555 aaKnown RBP7.27□□□□□ -1.25
SNHG1-220ENST00000544550 IQGAP2Q13576 1575 aa7.26□□□□□ -1.25
SNHG1-220ENST00000544550 MNX1P50219 401 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-220ENST00000544550 NUBP1P53384 320 aa7.26□□□□□ -1.25
SNHG1-220ENST00000544550 CIZ1Q9ULV3 898 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-220ENST00000544550 CARMIL1Q5VZK9 1371 aa7.25□□□□□ -1.25
SNHG1-220ENST00000544550 RGL2O15211 777 aa7.25□□□□□ -1.25
SNHG1-220ENST00000544550 ILDR2Q71H61 639 aa7.25□□□□□ -1.25
SNHG1-220ENST00000544550 CERKQ8TCT0 537 aa7.25□□□□□ -1.25
SNHG1-220ENST00000544550 ZCCHC11Q5TAX3 1644 aaKnown RBP7.24□□□□□ -1.25
SNHG1-220ENST00000544550 PHLDB1Q86UU1 1377 aa7.24□□□□□ -1.25
SNHG1-220ENST00000544550 DISP1Q96F81 1524 aa7.24□□□□□ -1.25
SNHG1-220ENST00000544550 PLCB2Q00722 1185 aa7.24□□□□□ -1.25
SNHG1-220ENST00000544550 KIF21BO75037 1637 aa7.23□□□□□ -1.25
SNHG1-220ENST00000544550 ARAP3Q8WWN8 1544 aa7.23□□□□□ -1.25
SNHG1-220ENST00000544550 CFAP43Q8NDM7 1665 aa7.23□□□□□ -1.25
SNHG1-220ENST00000544550 GSE1Q14687 1217 aa7.23□□□□□ -1.25
SNHG1-220ENST00000544550 ATN1P54259 1190 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-220ENST00000544550 ADAMTSL3P82987 1691 aa7.22□□□□□ -1.25
SNHG1-220ENST00000544550 MMRN1Q13201 1228 aa7.21□□□□□ -1.26
SNHG1-220ENST00000544550 KCNH8Q96L42 1107 aa7.21□□□□□ -1.26
SNHG1-220ENST00000544550 ARID4BQ4LE39 1312 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-220ENST00000544550 UGGT2Q9NYU1 1516 aa7.21□□□□□ -1.26
SNHG1-220ENST00000544550 SEC24BO95487 1268 aa7.2□□□□□ -1.26
SNHG1-220ENST00000544550 FAM9AQ8IZU1 332 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-220ENST00000544550 BBXQ8WY36 941 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-220ENST00000544550 KIAA0556O60303 1618 aa7.19□□□□□ -1.26
SNHG1-220ENST00000544550 SPATA31D1Q6ZQQ2 1576 aa7.18□□□□□ -1.26
SNHG1-220ENST00000544550 SUPT5HO00267 1087 aaKnown RBP7.18□□□□□ -1.26
SNHG1-220ENST00000544550 TIE1P35590 1138 aa7.18□□□□□ -1.26
SNHG1-220ENST00000544550 DCAF8Q5TAQ9 597 aa7.18□□□□□ -1.26
SNHG1-220ENST00000544550 SPNS2Q8IVW8 549 aa7.18□□□□□ -1.26
SNHG1-220ENST00000544550 TMEM121BQ9BXQ6 578 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-220ENST00000544550 POGZQ7Z3K3 1410 aa7.18□□□□□ -1.26
SNHG1-220ENST00000544550 HSPA2P54652 639 aa7.17□□□□□ -1.26
SNHG1-220ENST00000544550 BCORL1Q5H9F3 1711 aa7.17□□□□□ -1.26
SNHG1-220ENST00000544550 NEO1Q92859 1461 aa7.17□□□□□ -1.26
SNHG1-220ENST00000544550 MADDQ8WXG6 1647 aa7.16□□□□□ -1.26
SNHG1-220ENST00000544550 RAPGEF3O95398 923 aa7.16□□□□□ -1.26
SNHG1-220ENST00000544550 IER5LQ5T953 404 aa7.16□□□□□ -1.26
SNHG1-220ENST00000544550 RASEFQ8IZ41 740 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms