RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 KIF7Q2M1P5 1343 aa24.41■■□□□ 1.5
CCT4-204ENST00000544079 THOC2Q8NI27 1593 aaKnown RBP24.4■■□□□ 1.5
CCT4-204ENST00000544079 SUPT6HQ7KZ85 1726 aaKnown RBP24.4■■□□□ 1.5
CCT4-204ENST00000544079 BACH2Q9BYV9 841 aa24.4■■□□□ 1.5
CCT4-204ENST00000544079 MTUS2Q5JR59 1369 aa24.4■■□□□ 1.5
CCT4-204ENST00000544079 PDE4AP27815 886 aa24.4■■□□□ 1.5
CCT4-204ENST00000544079 DDRGK1Q96HY6 314 aa24.39■■□□□ 1.5
CCT4-204ENST00000544079 GSE1Q14687 1217 aa24.38■■□□□ 1.49
CCT4-204ENST00000544079 ATP1B4Q9UN42 357 aaPredicted RBP24.38■■□□□ 1.49
CCT4-204ENST00000544079 LAS1LQ9Y4W2 734 aaKnown RBP24.37■■□□□ 1.49
CCT4-204ENST00000544079 DHX29Q7Z478 1369 aaKnown RBP24.37■■□□□ 1.49
CCT4-204ENST00000544079 MIA2Q96PC5 1412 aa24.37■■□□□ 1.49
CCT4-204ENST00000544079 CTTNBP2Q8WZ74 1663 aa24.36■■□□□ 1.49
CCT4-204ENST00000544079 TCOF1Q13428 1488 aaKnown RBP24.36■■□□□ 1.49
CCT4-204ENST00000544079 EHBP1L1Q8N3D4 1523 aa24.36■■□□□ 1.49
CCT4-204ENST00000544079 L3MBTL2Q969R5 705 aa24.36■■□□□ 1.49
CCT4-204ENST00000544079 ARHGEF11O15085 1522 aa24.34■■□□□ 1.49
CCT4-204ENST00000544079 RPRD2Q5VT52 1461 aaKnown RBP24.33■■□□□ 1.49
CCT4-204ENST00000544079 TEX14Q8IWB6 1497 aa24.32■■□□□ 1.48
CCT4-204ENST00000544079 NPM2Q86SE8 214 aaKnown RBP24.32■■□□□ 1.48
CCT4-204ENST00000544079 P3H3Q8IVL6 736 aa24.32■■□□□ 1.48
CCT4-204ENST00000544079 UGGT2Q9NYU1 1516 aa24.31■■□□□ 1.48
CCT4-204ENST00000544079 ARID4BQ4LE39 1312 aaPredicted RBP24.31■■□□□ 1.48
CCT4-204ENST00000544079 RRP1P56182 461 aaKnown RBP24.29■■□□□ 1.48
CCT4-204ENST00000544079 LRRIQ1Q96JM4 1722 aa24.28■■□□□ 1.48
CCT4-204ENST00000544079 RSPH6AQ9H0K4 717 aa24.28■■□□□ 1.48
CCT4-204ENST00000544079 BRPF3Q9ULD4 1205 aa24.28■■□□□ 1.48
CCT4-204ENST00000544079 CUL7Q14999 1698 aa24.27■■□□□ 1.48
CCT4-204ENST00000544079 LAMC3Q9Y6N6 1575 aa24.27■■□□□ 1.48
CCT4-204ENST00000544079 PNISRQ8TF01 805 aaKnown RBP24.26■■□□□ 1.47
CCT4-204ENST00000544079 MPHOSPH9Q99550 1183 aa24.26■■□□□ 1.47
CCT4-204ENST00000544079 LRPPRCP42704 1394 aaKnown RBP24.25■■□□□ 1.47
CCT4-204ENST00000544079 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
CCT4-204ENST00000544079 ANKRD30BQ9BXX2 1392 aa24.24■■□□□ 1.47
CCT4-204ENST00000544079 NBPF8Q3BBV2 869 aa24.23■■□□□ 1.47
CCT4-204ENST00000544079 SAMD9Q5K651 1589 aa24.23■■□□□ 1.47
CCT4-204ENST00000544079 KDM6BO15054 1643 aa24.22■■□□□ 1.47
CCT4-204ENST00000544079 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
CCT4-204ENST00000544079 FAM43AQ8N2R8 423 aa24.21■■□□□ 1.47
CCT4-204ENST00000544079 KTN1Q86UP2 1357 aaKnown RBP24.21■■□□□ 1.47
CCT4-204ENST00000544079 NFKBIBQ15653 356 aa24.21■■□□□ 1.47
CCT4-204ENST00000544079 ROCK2O75116 1388 aaKnown RBP24.2■■□□□ 1.46
CCT4-204ENST00000544079 EXOC6Q8TAG9 804 aa24.19■■□□□ 1.46
CCT4-204ENST00000544079 PDE3BQ13370 1112 aa24.17■■□□□ 1.46
CCT4-204ENST00000544079 RRP7BPQ9NSQ0 103 aa24.16■■□□□ 1.46
CCT4-204ENST00000544079 BRD4O60885 1362 aaPredicted RBP24.15■■□□□ 1.46
CCT4-204ENST00000544079 FRAT1Q92837 279 aaPredicted RBP24.15■■□□□ 1.46
CCT4-204ENST00000544079 RCAN3Q9UKA8 241 aa24.15■■□□□ 1.46
CCT4-204ENST00000544079 BCORL1Q5H9F3 1711 aa24.14■■□□□ 1.45
CCT4-204ENST00000544079 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
CCT4-204ENST00000544079 TMC1Q8TDI8 760 aa24.13■■□□□ 1.45
CCT4-204ENST00000544079 EIF5BO60841 1220 aaKnown RBP24.12■■□□□ 1.45
CCT4-204ENST00000544079 MBD5Q9P267 1494 aa24.12■■□□□ 1.45
CCT4-204ENST00000544079 ROCK1Q13464 1354 aa24.1■■□□□ 1.45
CCT4-204ENST00000544079 KIF15Q9NS87 1388 aa24.09■■□□□ 1.45
CCT4-204ENST00000544079 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.45
CCT4-204ENST00000544079 KIF14Q15058 1648 aa24.08■■□□□ 1.45
CCT4-204ENST00000544079 KDM5CP41229 1560 aa24.08■■□□□ 1.44
CCT4-204ENST00000544079 USP47Q96K76 1375 aa24.05■■□□□ 1.44
CCT4-204ENST00000544079 CADPSQ9ULU8 1353 aa24.05■■□□□ 1.44
CCT4-204ENST00000544079 MAGI3Q5TCQ9 1506 aa24.04■■□□□ 1.44
CCT4-204ENST00000544079 MYBBP1AQ9BQG0 1328 aaKnown RBP24.04■■□□□ 1.44
CCT4-204ENST00000544079 INSRP06213 1382 aa24.04■■□□□ 1.44
CCT4-204ENST00000544079 RALBP1Q15311 655 aa24.04■■□□□ 1.44
CCT4-204ENST00000544079 DAXXQ9UER7 740 aaPredicted RBP24.04■■□□□ 1.44
CCT4-204ENST00000544079 CHIC2Q9UKJ5 165 aa24.03■■□□□ 1.44
CCT4-204ENST00000544079 ZMYM4Q5VZL5 1548 aa24.02■■□□□ 1.44
CCT4-204ENST00000544079 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
CCT4-204ENST00000544079 E9PCH4 1651 aa23.97■■□□□ 1.43
CCT4-204ENST00000544079 FOXD1Q16676 465 aa23.97■■□□□ 1.43
CCT4-204ENST00000544079 GLIPR1L2Q4G1C9 344 aa23.95■■□□□ 1.43
CCT4-204ENST00000544079 UHRF1BP1Q6BDS2 1440 aa23.94■■□□□ 1.42
CCT4-204ENST00000544079 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
CCT4-204ENST00000544079 DNMT1P26358 1616 aaKnown RBP23.93■■□□□ 1.42
CCT4-204ENST00000544079 RALGAPBQ86X10 1494 aa23.93■■□□□ 1.42
CCT4-204ENST00000544079 KDM2BQ8NHM5 1336 aa23.92■■□□□ 1.42
CCT4-204ENST00000544079 FAM161AQ3B820 660 aa23.91■■□□□ 1.42
CCT4-204ENST00000544079 PKNOX2Q96KN3 472 aa23.91■■□□□ 1.42
CCT4-204ENST00000544079 PLEKHH2Q8IVE3 1493 aa23.91■■□□□ 1.42
CCT4-204ENST00000544079 DAPK1P53355 1430 aa23.91■■□□□ 1.42
CCT4-204ENST00000544079 WDR62O43379 1518 aa23.9■■□□□ 1.42
CCT4-204ENST00000544079 CENPQQ7L2Z9 268 aaPredicted RBP23.89■■□□□ 1.41
CCT4-204ENST00000544079 DCAF11Q8TEB1 546 aa23.88■■□□□ 1.41
CCT4-204ENST00000544079 SLC4A1APQ9BWU0 796 aaKnown RBP23.88■■□□□ 1.41
CCT4-204ENST00000544079 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
CCT4-204ENST00000544079 PZPP20742 1482 aa23.87■■□□□ 1.41
CCT4-204ENST00000544079 FRAT2O75474 233 aaPredicted RBP23.87■■□□□ 1.41
CCT4-204ENST00000544079 NLRP13Q86W25 1043 aa23.87■■□□□ 1.41
CCT4-204ENST00000544079 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
CCT4-204ENST00000544079 CRBNQ96SW2 442 aa23.86■■□□□ 1.41
CCT4-204ENST00000544079 PARD3Q8TEW0 1356 aa23.84■■□□□ 1.41
CCT4-204ENST00000544079 BLMP54132 1417 aaPredicted RBP23.84■■□□□ 1.41
CCT4-204ENST00000544079 SLC4A3P48751 1232 aa23.84■■□□□ 1.41
CCT4-204ENST00000544079 C8orf34Q49A92 452 aa23.84■■□□□ 1.41
CCT4-204ENST00000544079 L1TD1Q5T7N2 865 aaKnown RBP23.84■■□□□ 1.41
CCT4-204ENST00000544079 KIAA1107Q9UPP5 1409 aa23.83■■□□□ 1.41
CCT4-204ENST00000544079 EPRSP07814 1512 aaKnown RBP23.83■■□□□ 1.4
CCT4-204ENST00000544079 ARHGEF12Q9NZN5 1544 aa23.83■■□□□ 1.4
CCT4-204ENST00000544079 POLR3GLQ9BT43 218 aa23.82■■□□□ 1.4
CCT4-204ENST00000544079 ABCC5O15440 1437 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms