RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 CASKIN1Q8WXD9 1431 aa18.68■□□□□ 0.58
C1RL-209ENST00000543941 CDC42BPBQ9Y5S2 1711 aa18.68■□□□□ 0.58
C1RL-209ENST00000543941 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
C1RL-209ENST00000543941 ZFYVE16Q7Z3T8 1539 aa18.65■□□□□ 0.58
C1RL-209ENST00000543941 ARID4BQ4LE39 1312 aaPredicted RBP18.65■□□□□ 0.58
C1RL-209ENST00000543941 EFCAB2Q5VUJ9 269 aa18.63■□□□□ 0.57
C1RL-209ENST00000543941 CDK11AQ9UQ88 783 aaPredicted RBP18.63■□□□□ 0.57
C1RL-209ENST00000543941 RIMS1Q86UR5 1692 aaKnown RBP18.63■□□□□ 0.57
C1RL-209ENST00000543941 CLIP1P30622 1438 aa18.62■□□□□ 0.57
C1RL-209ENST00000543941 ARHGEF12Q9NZN5 1544 aa18.61■□□□□ 0.57
C1RL-209ENST00000543941 MAGI2Q86UL8 1455 aa18.6■□□□□ 0.57
C1RL-209ENST00000543941 AFAP1Q8N556 730 aa18.6■□□□□ 0.57
C1RL-209ENST00000543941 ARHGAP5Q13017 1502 aa18.59■□□□□ 0.57
C1RL-209ENST00000543941 CDC42BPAQ5VT25 1732 aa18.58■□□□□ 0.57
C1RL-209ENST00000543941 PREX2Q70Z35 1606 aa18.58■□□□□ 0.56
C1RL-209ENST00000543941 CCDC18Q5T9S5 1454 aa18.58■□□□□ 0.56
C1RL-209ENST00000543941 KDM5CP41229 1560 aa18.57■□□□□ 0.56
C1RL-209ENST00000543941 FYCO1Q9BQS8 1478 aa18.57■□□□□ 0.56
C1RL-209ENST00000543941 ILDR1Q86SU0 546 aaPredicted RBP18.56■□□□□ 0.56
C1RL-209ENST00000543941 ATP10AO60312 1499 aa18.56■□□□□ 0.56
C1RL-209ENST00000543941 TRAPPC8Q9Y2L5 1435 aa18.56■□□□□ 0.56
C1RL-209ENST00000543941 MLECQ14165 292 aa18.55■□□□□ 0.56
C1RL-209ENST00000543941 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
C1RL-209ENST00000543941 ITSN2Q9NZM3 1697 aa18.53■□□□□ 0.56
C1RL-209ENST00000543941 ABCC1P33527 1531 aa18.53■□□□□ 0.56
C1RL-209ENST00000543941 ZNF518AQ6AHZ1 1483 aa18.52■□□□□ 0.56
C1RL-209ENST00000543941 DIP2CQ9Y2E4 1556 aa18.52■□□□□ 0.56
C1RL-209ENST00000543941 ABCA6Q8N139 1617 aa18.52■□□□□ 0.55
C1RL-209ENST00000543941 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
C1RL-209ENST00000543941 FER1L4A9Z1Z3 1794 aa18.51■□□□□ 0.55
C1RL-209ENST00000543941 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
C1RL-209ENST00000543941 GPATCH8Q9UKJ3 1502 aaKnown RBP18.5■□□□□ 0.55
C1RL-209ENST00000543941 SAMD9LQ8IVG5 1584 aa18.49■□□□□ 0.55
C1RL-209ENST00000543941 KIDINS220Q9ULH0 1771 aa18.49■□□□□ 0.55
C1RL-209ENST00000543941 MLH3Q9UHC1 1453 aa18.47■□□□□ 0.55
C1RL-209ENST00000543941 CEBPAP49715 358 aaPredicted RBP18.46■□□□□ 0.55
C1RL-209ENST00000543941 HSPA2P54652 639 aa18.46■□□□□ 0.55
C1RL-209ENST00000543941 REREQ9P2R6 1566 aa18.44■□□□□ 0.54
C1RL-209ENST00000543941 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
C1RL-209ENST00000543941 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
C1RL-209ENST00000543941 ZNF777Q9ULD5 760 aaPredicted RBP18.43■□□□□ 0.54
C1RL-209ENST00000543941 HNRNPMP52272 730 aaKnown RBP eCLIP18.42■□□□□ 0.543e-11■■■■□ 20.7
C1RL-209ENST00000543941 SYCP2Q9BX26 1530 aa18.42■□□□□ 0.54
C1RL-209ENST00000543941 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.53
C1RL-209ENST00000543941 ZNF644Q9H582 1327 aaPredicted RBP18.39■□□□□ 0.53
C1RL-209ENST00000543941 AGLP35573 1532 aa18.39■□□□□ 0.53
C1RL-209ENST00000543941 TIAM1Q13009 1591 aa18.38■□□□□ 0.53
C1RL-209ENST00000543941 MTUS2Q5JR59 1369 aa18.36■□□□□ 0.53
C1RL-209ENST00000543941 C3P01024 1663 aa18.35■□□□□ 0.53
C1RL-209ENST00000543941 CCNB3Q8WWL7 1395 aa18.35■□□□□ 0.53
C1RL-209ENST00000543941 KIAA1107Q9UPP5 1409 aa18.34■□□□□ 0.53
C1RL-209ENST00000543941 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
C1RL-209ENST00000543941 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
C1RL-209ENST00000543941 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.52
C1RL-209ENST00000543941 MBD5Q9P267 1494 aa18.33■□□□□ 0.52
C1RL-209ENST00000543941 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
C1RL-209ENST00000543941 PREX1Q8TCU6 1659 aa18.32■□□□□ 0.52
C1RL-209ENST00000543941 SPAG9O60271 1321 aaKnown RBP18.31■□□□□ 0.52
C1RL-209ENST00000543941 ATP7AQ04656 1500 aa18.31■□□□□ 0.52
C1RL-209ENST00000543941 STRCQ7RTU9 1775 aa18.3■□□□□ 0.52
C1RL-209ENST00000543941 SETD1BQ9UPS6 1966 aaKnown RBP18.29■□□□□ 0.52
C1RL-209ENST00000543941 PLXNC1O60486 1568 aa18.29■□□□□ 0.52
C1RL-209ENST00000543941 NCOA2Q15596 1464 aa18.27■□□□□ 0.52
C1RL-209ENST00000543941 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
C1RL-209ENST00000543941 A2MP01023 1474 aa18.25■□□□□ 0.51
C1RL-209ENST00000543941 KANK4Q5T7N3 995 aaPredicted RBP18.24■□□□□ 0.51
C1RL-209ENST00000543941 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
C1RL-209ENST00000543941 FBXO41Q8TF61 875 aa18.23■□□□□ 0.51
C1RL-209ENST00000543941 CLTCQ00610 1675 aaKnown RBP18.22■□□□□ 0.51
C1RL-209ENST00000543941 ADGBQ8N7X0 1667 aa18.22■□□□□ 0.51
C1RL-209ENST00000543941 UHRF1BP1Q6BDS2 1440 aa18.21■□□□□ 0.51
C1RL-209ENST00000543941 MROH2AA6NES4 1674 aa18.21■□□□□ 0.51
C1RL-209ENST00000543941 CAMSAP2Q08AD1 1489 aa18.2■□□□□ 0.5
C1RL-209ENST00000543941 ZMYM3Q14202 1370 aa18.2■□□□□ 0.5
C1RL-209ENST00000543941 LRRC9Q6ZRR7 1453 aa18.2■□□□□ 0.5
C1RL-209ENST00000543941 CNTLNQ9NXG0 1405 aa18.18■□□□□ 0.5
C1RL-209ENST00000543941 RTEL1-TNFRSF6BF6WH68 1400 aa18.17■□□□□ 0.5
C1RL-209ENST00000543941 GGT6Q6P531 493 aa18.17■□□□□ 0.5
C1RL-209ENST00000543941 ESF1Q9H501 851 aaKnown RBP18.15■□□□□ 0.5
C1RL-209ENST00000543941 DHX29Q7Z478 1369 aaKnown RBP18.15■□□□□ 0.5
C1RL-209ENST00000543941 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
C1RL-209ENST00000543941 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.5
C1RL-209ENST00000543941 CERKQ8TCT0 537 aa18.13■□□□□ 0.49
C1RL-209ENST00000543941 NPATQ14207 1427 aa18.13■□□□□ 0.49
C1RL-209ENST00000543941 MAP3K1Q13233 1512 aa18.12■□□□□ 0.49
C1RL-209ENST00000543941 ARHGEF5Q12774 1597 aa18.12■□□□□ 0.49
C1RL-209ENST00000543941 NCOA1Q15788 1441 aa18.1■□□□□ 0.49
C1RL-209ENST00000543941 CAMSAP1Q5T5Y3 1602 aa18.09■□□□□ 0.49
C1RL-209ENST00000543941 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
C1RL-209ENST00000543941 KIF3BO15066 747 aa18.08■□□□□ 0.48
C1RL-209ENST00000543941 PTPRTO14522 1441 aa18.07■□□□□ 0.48
C1RL-209ENST00000543941 ZNF142P52746 1687 aaPredicted RBP18.07■□□□□ 0.48
C1RL-209ENST00000543941 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
C1RL-209ENST00000543941 LTBP4Q8N2S1 1624 aa18.06■□□□□ 0.48
C1RL-209ENST00000543941 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
C1RL-209ENST00000543941 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
C1RL-209ENST00000543941 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
C1RL-209ENST00000543941 MYOM3Q5VTT5 1437 aa18.05■□□□□ 0.48
C1RL-209ENST00000543941 MAST1Q9Y2H9 1570 aa18.04■□□□□ 0.48
C1RL-209ENST00000543941 CEP170BQ9Y4F5 1589 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms