RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-222ENST00000543695 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
LDHA-222ENST00000543695 ADGRL1O94910 1474 aa16.63■□□□□ 0.25
LDHA-222ENST00000543695 ARAP3Q8WWN8 1544 aa16.63■□□□□ 0.25
LDHA-222ENST00000543695 ABCA9Q8IUA7 1624 aa16.61■□□□□ 0.25
LDHA-222ENST00000543695 RAPGEF3O95398 923 aa16.61■□□□□ 0.25
LDHA-222ENST00000543695 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
LDHA-222ENST00000543695 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
LDHA-222ENST00000543695 NEO1Q92859 1461 aa16.6■□□□□ 0.25
LDHA-222ENST00000543695 SETD5Q9C0A6 1442 aa16.59■□□□□ 0.25
LDHA-222ENST00000543695 FGD6Q6ZV73 1430 aa16.57■□□□□ 0.24
LDHA-222ENST00000543695 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
LDHA-222ENST00000543695 RAB3GAP2Q9H2M9 1393 aa16.56■□□□□ 0.24
LDHA-222ENST00000543695 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
LDHA-222ENST00000543695 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
LDHA-222ENST00000543695 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
LDHA-222ENST00000543695 AKNAQ7Z591 1439 aa16.52■□□□□ 0.23
LDHA-222ENST00000543695 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.23
LDHA-222ENST00000543695 CDK13Q14004 1512 aaKnown RBP16.51■□□□□ 0.23
LDHA-222ENST00000543695 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
LDHA-222ENST00000543695 FANCAO15360 1455 aa16.5■□□□□ 0.23
LDHA-222ENST00000543695 DENND4BO75064 1496 aaPredicted RBP16.5■□□□□ 0.23
LDHA-222ENST00000543695 ITGAEP38570 1179 aa16.5■□□□□ 0.23
LDHA-222ENST00000543695 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
LDHA-222ENST00000543695 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.5■□□□□ 0.231e-17■■□□□ 13.5
LDHA-222ENST00000543695 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
LDHA-222ENST00000543695 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
LDHA-222ENST00000543695 PLCH2O75038 1416 aa16.47■□□□□ 0.23
LDHA-222ENST00000543695 GCC2Q8IWJ2 1684 aa16.46■□□□□ 0.23
LDHA-222ENST00000543695 TROQ12816 1431 aaPredicted RBP16.43■□□□□ 0.22
LDHA-222ENST00000543695 SCAPERQ9BY12 1400 aa16.43■□□□□ 0.22
LDHA-222ENST00000543695 TTC37Q6PGP7 1564 aa16.43■□□□□ 0.22
LDHA-222ENST00000543695 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
LDHA-222ENST00000543695 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
LDHA-222ENST00000543695 CFAP74Q9C0B2 1584 aa16.41■□□□□ 0.22
LDHA-222ENST00000543695 FRMPD1Q5SYB0 1578 aa16.39■□□□□ 0.21
LDHA-222ENST00000543695 MAGI2Q86UL8 1455 aa16.38■□□□□ 0.21
LDHA-222ENST00000543695 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
LDHA-222ENST00000543695 PTPRKQ15262 1439 aa16.36■□□□□ 0.21
LDHA-222ENST00000543695 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
LDHA-222ENST00000543695 PTPRMP28827 1452 aa16.35■□□□□ 0.21
LDHA-222ENST00000543695 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
LDHA-222ENST00000543695 YEATS2Q9ULM3 1422 aa16.35■□□□□ 0.21
LDHA-222ENST00000543695 KIF14Q15058 1648 aa16.34■□□□□ 0.21
LDHA-222ENST00000543695 AFAP1Q8N556 730 aa16.34■□□□□ 0.21
LDHA-222ENST00000543695 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
LDHA-222ENST00000543695 NAIPQ13075 1403 aa16.34■□□□□ 0.21
LDHA-222ENST00000543695 RICTORQ6R327 1708 aa16.33■□□□□ 0.21
LDHA-222ENST00000543695 ZMYM4Q5VZL5 1548 aa16.33■□□□□ 0.2
LDHA-222ENST00000543695 ARHGEF40Q8TER5 1519 aa16.33■□□□□ 0.2
LDHA-222ENST00000543695 HECW2Q9P2P5 1572 aa16.33■□□□□ 0.2
LDHA-222ENST00000543695 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.2
LDHA-222ENST00000543695 ADAMTSL3P82987 1691 aa16.32■□□□□ 0.2
LDHA-222ENST00000543695 ARHGAP5Q13017 1502 aa16.32■□□□□ 0.2
LDHA-222ENST00000543695 MLECQ14165 292 aa16.32■□□□□ 0.2
LDHA-222ENST00000543695 ZFYVE16Q7Z3T8 1539 aa16.32■□□□□ 0.2
LDHA-222ENST00000543695 ATP10AO60312 1499 aa16.3■□□□□ 0.2
LDHA-222ENST00000543695 ZNF518AQ6AHZ1 1483 aa16.29■□□□□ 0.2
LDHA-222ENST00000543695 MYO5CQ9NQX4 1742 aa16.29■□□□□ 0.2
LDHA-222ENST00000543695 ADGBQ8N7X0 1667 aa16.29■□□□□ 0.2
LDHA-222ENST00000543695 BCORL1Q5H9F3 1711 aa16.28■□□□□ 0.2
LDHA-222ENST00000543695 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
LDHA-222ENST00000543695 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.2
LDHA-222ENST00000543695 CROCC2H7BZ55 1655 aa16.26■□□□□ 0.19
LDHA-222ENST00000543695 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
LDHA-222ENST00000543695 MADDQ8WXG6 1647 aa16.25■□□□□ 0.19
LDHA-222ENST00000543695 C9orf84Q5VXU9 1444 aa16.25■□□□□ 0.19
LDHA-222ENST00000543695 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
LDHA-222ENST00000543695 CFDP1Q9UEE9 299 aaPredicted RBP16.23■□□□□ 0.19
LDHA-222ENST00000543695 ROCK1Q13464 1354 aa16.23■□□□□ 0.19
LDHA-222ENST00000543695 DAPK1P53355 1430 aa16.22■□□□□ 0.19
LDHA-222ENST00000543695 TRAPPC8Q9Y2L5 1435 aa16.22■□□□□ 0.19
LDHA-222ENST00000543695 CDC42BPAQ5VT25 1732 aa16.22■□□□□ 0.19
LDHA-222ENST00000543695 ILDR1Q86SU0 546 aaPredicted RBP16.21■□□□□ 0.19
LDHA-222ENST00000543695 MLH3Q9UHC1 1453 aa16.21■□□□□ 0.19
LDHA-222ENST00000543695 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
LDHA-222ENST00000543695 KDM5CP41229 1560 aa16.2■□□□□ 0.18
LDHA-222ENST00000543695 GPATCH8Q9UKJ3 1502 aaKnown RBP16.19■□□□□ 0.18
LDHA-222ENST00000543695 MIER1Q8N108 512 aa16.19■□□□□ 0.18
LDHA-222ENST00000543695 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
LDHA-222ENST00000543695 CDC42BPBQ9Y5S2 1711 aa16.19■□□□□ 0.18
LDHA-222ENST00000543695 ARHGEF12Q9NZN5 1544 aa16.19■□□□□ 0.18
LDHA-222ENST00000543695 CAMSAP2Q08AD1 1489 aa16.18■□□□□ 0.18
LDHA-222ENST00000543695 SIN3AQ96ST3 1273 aa16.18■□□□□ 0.18
LDHA-222ENST00000543695 PREX2Q70Z35 1606 aa16.18■□□□□ 0.18
LDHA-222ENST00000543695 RIMS1Q86UR5 1692 aaKnown RBP16.18■□□□□ 0.18
LDHA-222ENST00000543695 ABCC5O15440 1437 aa16.17■□□□□ 0.18
LDHA-222ENST00000543695 SPAG9O60271 1321 aaKnown RBP16.17■□□□□ 0.18
LDHA-222ENST00000543695 ABCC1P33527 1531 aa16.16■□□□□ 0.18
LDHA-222ENST00000543695 CEBPAP49715 358 aaPredicted RBP16.16■□□□□ 0.18
LDHA-222ENST00000543695 HSPA2P54652 639 aa16.16■□□□□ 0.18
LDHA-222ENST00000543695 LMTK3Q96Q04 1460 aa16.15■□□□□ 0.18
LDHA-222ENST00000543695 SIGLEC1Q9BZZ2 1709 aa16.14■□□□□ 0.17
LDHA-222ENST00000543695 KIAA1107Q9UPP5 1409 aa16.14■□□□□ 0.17
LDHA-222ENST00000543695 NEUROD1Q13562 356 aa16.14■□□□□ 0.17
LDHA-222ENST00000543695 ADGRL2O95490 1459 aa16.14■□□□□ 0.17
LDHA-222ENST00000543695 PLEKHH2Q8IVE3 1493 aa16.14■□□□□ 0.17
LDHA-222ENST00000543695 PPP1R15AO75807 674 aaPredicted RBP16.13■□□□□ 0.17
LDHA-222ENST00000543695 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
LDHA-222ENST00000543695 RRP7BPQ9NSQ0 103 aa16.12■□□□□ 0.17
LDHA-222ENST00000543695 DIP2CQ9Y2E4 1556 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms