RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 YEATS2Q9ULM3 1422 aa26.63■■□□□ 1.85
SPPL3-207ENST00000543608 ARID4BQ4LE39 1312 aaPredicted RBP26.63■■□□□ 1.85
SPPL3-207ENST00000543608 POGZQ7Z3K3 1410 aa26.62■■□□□ 1.85
SPPL3-207ENST00000543608 SCAPERQ9BY12 1400 aa26.62■■□□□ 1.85
SPPL3-207ENST00000543608 PTPRMP28827 1452 aa26.62■■□□□ 1.85
SPPL3-207ENST00000543608 CLIP1P30622 1438 aa26.61■■□□□ 1.85
SPPL3-207ENST00000543608 CCDC18Q5T9S5 1454 aa26.58■■□□□ 1.85
SPPL3-207ENST00000543608 ARHGAP5Q13017 1502 aa26.58■■□□□ 1.85
SPPL3-207ENST00000543608 RIMS1Q86UR5 1692 aaKnown RBP26.56■■□□□ 1.84
SPPL3-207ENST00000543608 CDC42BPBQ9Y5S2 1711 aa26.55■■□□□ 1.84
SPPL3-207ENST00000543608 FYCO1Q9BQS8 1478 aa26.55■■□□□ 1.84
SPPL3-207ENST00000543608 EFCAB2Q5VUJ9 269 aa26.54■■□□□ 1.84
SPPL3-207ENST00000543608 MAGI2Q86UL8 1455 aa26.54■■□□□ 1.84
SPPL3-207ENST00000543608 PREX2Q70Z35 1606 aa26.52■■□□□ 1.84
SPPL3-207ENST00000543608 CDC42BPAQ5VT25 1732 aa26.46■■□□□ 1.83
SPPL3-207ENST00000543608 ZNF518AQ6AHZ1 1483 aa26.46■■□□□ 1.83
SPPL3-207ENST00000543608 KDM5CP41229 1560 aa26.46■■□□□ 1.83
SPPL3-207ENST00000543608 ABCC1P33527 1531 aa26.43■■□□□ 1.82
SPPL3-207ENST00000543608 FER1L4A9Z1Z3 1794 aa26.43■■□□□ 1.82
SPPL3-207ENST00000543608 MLECQ14165 292 aa26.42■■□□□ 1.82
SPPL3-207ENST00000543608 ATP10AO60312 1499 aa26.42■■□□□ 1.82
SPPL3-207ENST00000543608 ITSN2Q9NZM3 1697 aa26.41■■□□□ 1.82
SPPL3-207ENST00000543608 C9orf84Q5VXU9 1444 aa26.41■■□□□ 1.82
SPPL3-207ENST00000543608 AFAP1Q8N556 730 aa26.41■■□□□ 1.82
SPPL3-207ENST00000543608 ARHGEF12Q9NZN5 1544 aa26.39■■□□□ 1.82
SPPL3-207ENST00000543608 PLPPR3Q6T4P5 718 aa26.39■■□□□ 1.82
SPPL3-207ENST00000543608 DIP2CQ9Y2E4 1556 aa26.38■■□□□ 1.81
SPPL3-207ENST00000543608 ABCA6Q8N139 1617 aa26.37■■□□□ 1.81
SPPL3-207ENST00000543608 TRAPPC8Q9Y2L5 1435 aa26.37■■□□□ 1.81
SPPL3-207ENST00000543608 LMTK3Q96Q04 1460 aa26.36■■□□□ 1.81
SPPL3-207ENST00000543608 MYT1LQ9UL68 1186 aa26.33■■□□□ 1.81
SPPL3-207ENST00000543608 SAMD9LQ8IVG5 1584 aa26.33■■□□□ 1.8
SPPL3-207ENST00000543608 CEP162Q5TB80 1403 aa26.32■■□□□ 1.8
SPPL3-207ENST00000543608 MLH3Q9UHC1 1453 aa26.3■■□□□ 1.8
SPPL3-207ENST00000543608 GPATCH8Q9UKJ3 1502 aaKnown RBP26.3■■□□□ 1.8
SPPL3-207ENST00000543608 ILDR1Q86SU0 546 aaPredicted RBP26.29■■□□□ 1.8
SPPL3-207ENST00000543608 SYCP2Q9BX26 1530 aa26.29■■□□□ 1.8
SPPL3-207ENST00000543608 ZNF777Q9ULD5 760 aaPredicted RBP26.28■■□□□ 1.8
SPPL3-207ENST00000543608 REREQ9P2R6 1566 aa26.28■■□□□ 1.8
SPPL3-207ENST00000543608 KIDINS220Q9ULH0 1771 aa26.28■■□□□ 1.8
SPPL3-207ENST00000543608 MTUS2Q5JR59 1369 aa26.25■■□□□ 1.79
SPPL3-207ENST00000543608 EHBP1L1Q8N3D4 1523 aa26.22■■□□□ 1.79
SPPL3-207ENST00000543608 HSPA2P54652 639 aa26.21■■□□□ 1.79
SPPL3-207ENST00000543608 CCNB3Q8WWL7 1395 aa26.2■■□□□ 1.79
SPPL3-207ENST00000543608 TIAM1Q13009 1591 aa26.2■■□□□ 1.79
SPPL3-207ENST00000543608 CEBPAP49715 358 aaPredicted RBP26.18■■□□□ 1.78
SPPL3-207ENST00000543608 AGLP35573 1532 aa26.18■■□□□ 1.78
SPPL3-207ENST00000543608 HNRNPMP52272 730 aaKnown RBP eCLIP26.17■■□□□ 1.78
SPPL3-207ENST00000543608 CFDP1Q9UEE9 299 aaPredicted RBP26.17■■□□□ 1.78
SPPL3-207ENST00000543608 PREX1Q8TCU6 1659 aa26.15■■□□□ 1.78
SPPL3-207ENST00000543608 INO80Q9ULG1 1556 aaPredicted RBP26.14■■□□□ 1.78
SPPL3-207ENST00000543608 ATP7AQ04656 1500 aa26.14■■□□□ 1.77
SPPL3-207ENST00000543608 PLEKHH2Q8IVE3 1493 aa26.13■■□□□ 1.77
SPPL3-207ENST00000543608 C3P01024 1663 aa26.12■■□□□ 1.77
SPPL3-207ENST00000543608 LOC105371045A0A1W2PR82 267 aa26.12■■□□□ 1.77
SPPL3-207ENST00000543608 KIAA1107Q9UPP5 1409 aa26.12■■□□□ 1.77
SPPL3-207ENST00000543608 SPAG9O60271 1321 aaKnown RBP26.12■■□□□ 1.77
SPPL3-207ENST00000543608 SUPT6HQ7KZ85 1726 aaKnown RBP26.11■■□□□ 1.77
SPPL3-207ENST00000543608 ZNF644Q9H582 1327 aaPredicted RBP26.09■■□□□ 1.77
SPPL3-207ENST00000543608 PLXNC1O60486 1568 aa26.05■■□□□ 1.76
SPPL3-207ENST00000543608 NCOA2Q15596 1464 aa26.04■■□□□ 1.76
SPPL3-207ENST00000543608 VPS8Q8N3P4 1428 aa26.03■■□□□ 1.76
SPPL3-207ENST00000543608 ESF1Q9H501 851 aaKnown RBP26.02■■□□□ 1.76
SPPL3-207ENST00000543608 MBD5Q9P267 1494 aa26.02■■□□□ 1.76
SPPL3-207ENST00000543608 A2MP01023 1474 aa26.01■■□□□ 1.75
SPPL3-207ENST00000543608 UHRF1BP1Q6BDS2 1440 aa26■■□□□ 1.75
SPPL3-207ENST00000543608 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
SPPL3-207ENST00000543608 SETD1BQ9UPS6 1966 aaKnown RBP25.98■■□□□ 1.75
SPPL3-207ENST00000543608 CAMSAP2Q08AD1 1489 aa25.98■■□□□ 1.75
SPPL3-207ENST00000543608 CNTLNQ9NXG0 1405 aa25.98■■□□□ 1.75
SPPL3-207ENST00000543608 MROH2AA6NES4 1674 aa25.98■■□□□ 1.75
SPPL3-207ENST00000543608 CLTCQ00610 1675 aaKnown RBP25.97■■□□□ 1.75
SPPL3-207ENST00000543608 STRCQ7RTU9 1775 aa25.95■■□□□ 1.75
SPPL3-207ENST00000543608 LRRC9Q6ZRR7 1453 aa25.94■■□□□ 1.74
SPPL3-207ENST00000543608 CCDC141Q6ZP82 1450 aa25.91■■□□□ 1.74
SPPL3-207ENST00000543608 FBXO41Q8TF61 875 aa25.91■■□□□ 1.74
SPPL3-207ENST00000543608 RTEL1-TNFRSF6BF6WH68 1400 aa25.88■■□□□ 1.73
SPPL3-207ENST00000543608 ZMYM3Q14202 1370 aa25.88■■□□□ 1.73
SPPL3-207ENST00000543608 GGT6Q6P531 493 aa25.88■■□□□ 1.73
SPPL3-207ENST00000543608 KANK4Q5T7N3 995 aaPredicted RBP25.85■■□□□ 1.73
SPPL3-207ENST00000543608 ARHGEF5Q12774 1597 aa25.85■■□□□ 1.73
SPPL3-207ENST00000543608 NPATQ14207 1427 aa25.84■■□□□ 1.73
SPPL3-207ENST00000543608 MAP3K1Q13233 1512 aa25.83■■□□□ 1.72
SPPL3-207ENST00000543608 MYO3AQ8NEV4 1616 aa25.82■■□□□ 1.72
SPPL3-207ENST00000543608 DHX29Q7Z478 1369 aaKnown RBP25.82■■□□□ 1.72
SPPL3-207ENST00000543608 PTPRKQ15262 1439 aa25.8■■□□□ 1.72
SPPL3-207ENST00000543608 CAMSAP1Q5T5Y3 1602 aa25.77■■□□□ 1.72
SPPL3-207ENST00000543608 ZNF142P52746 1687 aaPredicted RBP25.77■■□□□ 1.72
SPPL3-207ENST00000543608 NCOA1Q15788 1441 aa25.77■■□□□ 1.72
SPPL3-207ENST00000543608 CERKQ8TCT0 537 aa25.76■■□□□ 1.71
SPPL3-207ENST00000543608 MYOM3Q5VTT5 1437 aa25.75■■□□□ 1.71
SPPL3-207ENST00000543608 CEP170BQ9Y4F5 1589 aaPredicted RBP25.74■■□□□ 1.71
SPPL3-207ENST00000543608 KIF3BO15066 747 aa25.74■■□□□ 1.71
SPPL3-207ENST00000543608 RSPH4AQ5TD94 716 aa25.74■■□□□ 1.71
SPPL3-207ENST00000543608 DMRT2Q9Y5R5 561 aa25.74■■□□□ 1.71
SPPL3-207ENST00000543608 MAST1Q9Y2H9 1570 aa25.73■■□□□ 1.71
SPPL3-207ENST00000543608 PTPRTO14522 1441 aa25.72■■□□□ 1.71
SPPL3-207ENST00000543608 KDM5DQ9BY66 1539 aa25.72■■□□□ 1.71
SPPL3-207ENST00000543608 PPP6R1Q9UPN7 881 aa25.71■■□□□ 1.71
SPPL3-207ENST00000543608 TSPY4P0CV99 314 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms