RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 NISCHQ9Y2I1 1504 aa40.7■■■■■ 4.11
SPPL3-207ENST00000543608 CCDC180Q9P1Z9 1646 aa36.47■■■■□ 3.43
SPPL3-207ENST00000543608 ABCC9O60706 1549 aa36.31■■■■□ 3.4
SPPL3-207ENST00000543608 RB1CC1Q8TDY2 1594 aa34.59■■■■□ 3.13
SPPL3-207ENST00000543608 NACADO15069 1562 aa34.38■■■■□ 3.09
SPPL3-207ENST00000543608 DCAF8L2P0C7V8 631 aa34.25■■■■□ 3.07
SPPL3-207ENST00000543608 MYO15BQ96JP2 1530 aa33.93■■■■□ 3.02
SPPL3-207ENST00000543608 UNC13AQ9UPW8 1703 aa33.93■■■■□ 3.02
SPPL3-207ENST00000543608 DNAJC5BQ9UF47 199 aa33.85■■■■□ 3.01
SPPL3-207ENST00000543608 PABPN1Q86U42 306 aaKnown RBP eCLIP33.8■■■■□ 3
SPPL3-207ENST00000543608 ZCCHC6Q5VYS8 1495 aaKnown RBP33.8■■■■□ 3
SPPL3-207ENST00000543608 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
SPPL3-207ENST00000543608 DCAF1Q9Y4B6 1507 aa33.58■■■□□ 2.97
SPPL3-207ENST00000543608 SCRIBQ14160 1630 aa33.31■■■□□ 2.92
SPPL3-207ENST00000543608 SHROOM4Q9ULL8 1493 aa33.09■■■□□ 2.89
SPPL3-207ENST00000543608 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
SPPL3-207ENST00000543608 EIF4G1Q04637 1599 aaKnown RBP32.78■■■□□ 2.84
SPPL3-207ENST00000543608 CECR2Q9BXF3 1484 aa32.65■■■□□ 2.82
SPPL3-207ENST00000543608 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
SPPL3-207ENST00000543608 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
SPPL3-207ENST00000543608 ATAD2BQ9ULI0 1458 aa31.69■■■□□ 2.66
SPPL3-207ENST00000543608 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
SPPL3-207ENST00000543608 BAZ1AQ9NRL2 1556 aaPredicted RBP31.58■■■□□ 2.65
SPPL3-207ENST00000543608 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
SPPL3-207ENST00000543608 BAZ1BQ9UIG0 1483 aaKnown RBP31.41■■■□□ 2.62
SPPL3-207ENST00000543608 MROH2BQ7Z745 1585 aa31.4■■■□□ 2.62
SPPL3-207ENST00000543608 PEG3Q9GZU2 1588 aa31.4■■■□□ 2.62
SPPL3-207ENST00000543608 ERCC6Q03468 1493 aa31.31■■■□□ 2.6
SPPL3-207ENST00000543608 NESP48681 1621 aa31.27■■■□□ 2.6
SPPL3-207ENST00000543608 CUX2O14529 1486 aa31.14■■■□□ 2.58
SPPL3-207ENST00000543608 WIZO95785 1651 aa31.07■■■□□ 2.56
SPPL3-207ENST00000543608 LAMC3Q9Y6N6 1575 aa31.01■■■□□ 2.56
SPPL3-207ENST00000543608 THOC2Q8NI27 1593 aaKnown RBP30.92■■■□□ 2.54
SPPL3-207ENST00000543608 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
SPPL3-207ENST00000543608 DNAJC5Q9H3Z4 198 aa30.87■■■□□ 2.53
SPPL3-207ENST00000543608 RSF1Q96T23 1441 aaPredicted RBP30.78■■■□□ 2.52
SPPL3-207ENST00000543608 PDS5BQ9NTI5 1447 aa30.78■■■□□ 2.52
SPPL3-207ENST00000543608 CADPSQ9ULU8 1353 aa30.77■■■□□ 2.52
SPPL3-207ENST00000543608 TOP2AP11388 1531 aaKnown RBP30.65■■■□□ 2.5
SPPL3-207ENST00000543608 MRC2Q9UBG0 1479 aa30.57■■■□□ 2.48
SPPL3-207ENST00000543608 WDR62O43379 1518 aa30.5■■■□□ 2.47
SPPL3-207ENST00000543608 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
SPPL3-207ENST00000543608 CFTRP13569 1480 aa30.47■■■□□ 2.47
SPPL3-207ENST00000543608 FANCD2Q9BXW9 1451 aa30.46■■■□□ 2.47
SPPL3-207ENST00000543608 PRDM2Q13029 1718 aa30.28■■■□□ 2.44
SPPL3-207ENST00000543608 CCDC88BA6NC98 1476 aa30.28■■■□□ 2.44
SPPL3-207ENST00000543608 URB2Q14146 1524 aaKnown RBP30.23■■■□□ 2.43
SPPL3-207ENST00000543608 TOPBP1Q92547 1522 aa29.92■■■□□ 2.38
SPPL3-207ENST00000543608 DNMBPQ6XZF7 1577 aa29.83■■■□□ 2.37
SPPL3-207ENST00000543608 ZNF608Q9ULD9 1512 aaPredicted RBP29.83■■■□□ 2.37
SPPL3-207ENST00000543608 IFT140Q96RY7 1462 aa29.83■■■□□ 2.37
SPPL3-207ENST00000543608 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
SPPL3-207ENST00000543608 EIF4G3O43432 1585 aaKnown RBP29.71■■■□□ 2.35
SPPL3-207ENST00000543608 OSCARQ8IYS5 282 aa29.69■■■□□ 2.34
SPPL3-207ENST00000543608 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
SPPL3-207ENST00000543608 TARBP1Q13395 1621 aaKnown RBP29.66■■■□□ 2.34
SPPL3-207ENST00000543608 POLA1P09884 1462 aaPredicted RBP29.63■■■□□ 2.33
SPPL3-207ENST00000543608 AQRO60306 1485 aaKnown RBP eCLIP29.56■■■□□ 2.32
SPPL3-207ENST00000543608 SUPT5HO00267 1087 aaKnown RBP29.56■■■□□ 2.32
SPPL3-207ENST00000543608 RAD54L2Q9Y4B4 1467 aa29.54■■■□□ 2.32
SPPL3-207ENST00000543608 CUX1P39880 1505 aa29.5■■■□□ 2.31
SPPL3-207ENST00000543608 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
SPPL3-207ENST00000543608 CHD1O14646 1710 aa29.48■■■□□ 2.31
SPPL3-207ENST00000543608 SOGA1O94964 1423 aa29.45■■■□□ 2.3
SPPL3-207ENST00000543608 RIMBP3CA6NJZ7 1639 aa29.43■■■□□ 2.3
SPPL3-207ENST00000543608 RIMBP3BA6NNM3 1639 aa29.43■■■□□ 2.3
SPPL3-207ENST00000543608 RIMBP3Q9UFD9 1639 aa29.43■■■□□ 2.3
SPPL3-207ENST00000543608 TDRD9Q8NDG6 1382 aaKnown RBP29.4■■■□□ 2.3
SPPL3-207ENST00000543608 ARHGEF11O15085 1522 aa29.34■■■□□ 2.29
SPPL3-207ENST00000543608 WDR97A6NE52 1622 aa29.31■■■□□ 2.28
SPPL3-207ENST00000543608 FBLN2P98095 1184 aa29.3■■■□□ 2.28
SPPL3-207ENST00000543608 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
SPPL3-207ENST00000543608 PBRM1Q86U86 1689 aa29.18■■■□□ 2.26
SPPL3-207ENST00000543608 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
SPPL3-207ENST00000543608 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
SPPL3-207ENST00000543608 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
SPPL3-207ENST00000543608 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
SPPL3-207ENST00000543608 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
SPPL3-207ENST00000543608 CLASP1Q7Z460 1538 aa29.09■■■□□ 2.25
SPPL3-207ENST00000543608 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
SPPL3-207ENST00000543608 SYNJ1O43426 1573 aa29.08■■■□□ 2.25
SPPL3-207ENST00000543608 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
SPPL3-207ENST00000543608 CHMP7Q8WUX9 453 aaPredicted RBP29.07■■■□□ 2.24
SPPL3-207ENST00000543608 ARAP1Q96P48 1450 aa29.07■■■□□ 2.24
SPPL3-207ENST00000543608 TOP2BQ02880 1626 aa29.06■■■□□ 2.24
SPPL3-207ENST00000543608 CYB5RLQ6IPT4 315 aa29.04■■■□□ 2.24
SPPL3-207ENST00000543608 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
SPPL3-207ENST00000543608 ADAMTS12P58397 1594 aa28.9■■■□□ 2.22
SPPL3-207ENST00000543608 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
SPPL3-207ENST00000543608 CEP170Q5SW79 1584 aa28.78■■■□□ 2.2
SPPL3-207ENST00000543608 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
SPPL3-207ENST00000543608 FHAD1B1AJZ9 1412 aa28.73■■■□□ 2.19
SPPL3-207ENST00000543608 NUP160Q12769 1436 aa28.71■■■□□ 2.19
SPPL3-207ENST00000543608 ERCC6L2Q5T890 1561 aa28.7■■■□□ 2.18
SPPL3-207ENST00000543608 TRHP20396 242 aaPredicted RBP28.66■■■□□ 2.18
SPPL3-207ENST00000543608 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
SPPL3-207ENST00000543608 RUSC2Q8N2Y8 1516 aa28.49■■■□□ 2.15
SPPL3-207ENST00000543608 KIF27Q86VH2 1401 aa28.44■■■□□ 2.14
SPPL3-207ENST00000543608 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
SPPL3-207ENST00000543608 CUL7Q14999 1698 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms