RNA–Protein interactions for RNA: ENST00000543507.1

KDM5A-209, Transcript of lysine demethylase 5A, humanhuman

TSL 4

Gene KDM5A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-209ENST00000543507 ARHGEF40Q8TER5 1519 aa34.37■■■■□ 3.09
KDM5A-209ENST00000543507 ARHGAP5Q13017 1502 aa34.35■■■■□ 3.09
KDM5A-209ENST00000543507 POGZQ7Z3K3 1410 aa34.34■■■■□ 3.09
KDM5A-209ENST00000543507 ZFYVE16Q7Z3T8 1539 aa34.3■■■■□ 3.08
KDM5A-209ENST00000543507 ADAMTSL3P82987 1691 aa34.25■■■■□ 3.07
KDM5A-209ENST00000543507 ZNF518AQ6AHZ1 1483 aa34.25■■■■□ 3.07
KDM5A-209ENST00000543507 BCORL1Q5H9F3 1711 aa34.24■■■■□ 3.07
KDM5A-209ENST00000543507 CEP162Q5TB80 1403 aa34.23■■■■□ 3.07
KDM5A-209ENST00000543507 YEATS2Q9ULM3 1422 aa34.21■■■■□ 3.07
KDM5A-209ENST00000543507 PREX2Q70Z35 1606 aa34.2■■■■□ 3.07
KDM5A-209ENST00000543507 CDC42BPBQ9Y5S2 1711 aa34.19■■■■□ 3.06
KDM5A-209ENST00000543507 PTPRMP28827 1452 aa34.17■■■■□ 3.06
KDM5A-209ENST00000543507 ATP10AO60312 1499 aa34.15■■■■□ 3.06
KDM5A-209ENST00000543507 MTUS2Q5JR59 1369 aa34.15■■■■□ 3.06
KDM5A-209ENST00000543507 MYT1LQ9UL68 1186 aa34.15■■■■□ 3.06
KDM5A-209ENST00000543507 AFAP1Q8N556 730 aa34.13■■■■□ 3.05
KDM5A-209ENST00000543507 C9orf84Q5VXU9 1444 aa34.12■■■■□ 3.05
KDM5A-209ENST00000543507 KDM5CP41229 1560 aa34.11■■■■□ 3.05
KDM5A-209ENST00000543507 HECW2Q9P2P5 1572 aa34.11■■■■□ 3.05
KDM5A-209ENST00000543507 MADDQ8WXG6 1647 aa34.1■■■■□ 3.05
KDM5A-209ENST00000543507 CDC42BPAQ5VT25 1732 aa34.09■■■■□ 3.05
KDM5A-209ENST00000543507 ABCC1P33527 1531 aa34.08■■■■□ 3.05
KDM5A-209ENST00000543507 GPATCH8Q9UKJ3 1502 aaKnown RBP34.05■■■■□ 3.04
KDM5A-209ENST00000543507 CCNB3Q8WWL7 1395 aa34.05■■■■□ 3.04
KDM5A-209ENST00000543507 MLH3Q9UHC1 1453 aa34.05■■■■□ 3.04
KDM5A-209ENST00000543507 ZNF777Q9ULD5 760 aaPredicted RBP34.04■■■■□ 3.04
KDM5A-209ENST00000543507 CFDP1Q9UEE9 299 aaPredicted RBP34.02■■■■□ 3.04
KDM5A-209ENST00000543507 ITSN2Q9NZM3 1697 aa34.01■■■■□ 3.04
KDM5A-209ENST00000543507 EHBP1L1Q8N3D4 1523 aa34■■■■□ 3.03
KDM5A-209ENST00000543507 MLECQ14165 292 aa34■■■■□ 3.03
KDM5A-209ENST00000543507 TRAPPC8Q9Y2L5 1435 aa34■■■■□ 3.03
KDM5A-209ENST00000543507 PLEKHH2Q8IVE3 1493 aa34■■■■□ 3.03
KDM5A-209ENST00000543507 RIMS1Q86UR5 1692 aaKnown RBP33.99■■■■□ 3.03
KDM5A-209ENST00000543507 LOC105371045A0A1W2PR82 267 aa33.99■■■■□ 3.03
KDM5A-209ENST00000543507 ARHGEF12Q9NZN5 1544 aa33.99■■■■□ 3.03
KDM5A-209ENST00000543507 SIGLEC1Q9BZZ2 1709 aa33.96■■■■□ 3.03
KDM5A-209ENST00000543507 REREQ9P2R6 1566 aa33.95■■■■□ 3.03
KDM5A-209ENST00000543507 KIAA1107Q9UPP5 1409 aa33.95■■■■□ 3.02
KDM5A-209ENST00000543507 SAMD9LQ8IVG5 1584 aa33.93■■■■□ 3.02
KDM5A-209ENST00000543507 DIP2CQ9Y2E4 1556 aa33.93■■■■□ 3.02
KDM5A-209ENST00000543507 FER1L4A9Z1Z3 1794 aa33.9■■■■□ 3.02
KDM5A-209ENST00000543507 VPS8Q8N3P4 1428 aa33.89■■■■□ 3.02
KDM5A-209ENST00000543507 SYCP2Q9BX26 1530 aa33.89■■■■□ 3.02
KDM5A-209ENST00000543507 HNRNPMP52272 730 aaKnown RBP eCLIP33.88■■■■□ 3.01
KDM5A-209ENST00000543507 SPAG9O60271 1321 aaKnown RBP33.87■■■■□ 3.01
KDM5A-209ENST00000543507 ABCA6Q8N139 1617 aa33.86■■■■□ 3.01
KDM5A-209ENST00000543507 AGLP35573 1532 aa33.84■■■■□ 3.01
KDM5A-209ENST00000543507 KIDINS220Q9ULH0 1771 aa33.83■■■■□ 3.01
KDM5A-209ENST00000543507 TIAM1Q13009 1591 aa33.83■■■■□ 3.01
KDM5A-209ENST00000543507 PLPPR3Q6T4P5 718 aa33.82■■■■□ 3
KDM5A-209ENST00000543507 ESF1Q9H501 851 aaKnown RBP33.82■■■■□ 3
KDM5A-209ENST00000543507 SUPT6HQ7KZ85 1726 aaKnown RBP33.8■■■■□ 3
KDM5A-209ENST00000543507 NCOA2Q15596 1464 aa33.76■■■■□ 3
KDM5A-209ENST00000543507 LMTK3Q96Q04 1460 aa33.76■■■■□ 3
KDM5A-209ENST00000543507 ATP7AQ04656 1500 aa33.74■■■□□ 2.99
KDM5A-209ENST00000543507 RSPH4AQ5TD94 716 aa33.73■■■□□ 2.99
KDM5A-209ENST00000543507 MAP3K1Q13233 1512 aa33.73■■■□□ 2.99
KDM5A-209ENST00000543507 LRRC9Q6ZRR7 1453 aa33.69■■■□□ 2.98
KDM5A-209ENST00000543507 ZNF644Q9H582 1327 aaPredicted RBP33.69■■■□□ 2.98
KDM5A-209ENST00000543507 CNTLNQ9NXG0 1405 aa33.69■■■□□ 2.98
KDM5A-209ENST00000543507 INO80Q9ULG1 1556 aaPredicted RBP33.68■■■□□ 2.98
KDM5A-209ENST00000543507 MBD5Q9P267 1494 aa33.67■■■□□ 2.98
KDM5A-209ENST00000543507 RTEL1-TNFRSF6BF6WH68 1400 aa33.66■■■□□ 2.98
KDM5A-209ENST00000543507 APLP2Q06481 763 aa33.66■■■□□ 2.98
KDM5A-209ENST00000543507 A2MP01023 1474 aa33.64■■■□□ 2.98
KDM5A-209ENST00000543507 CEBPAP49715 358 aaPredicted RBP33.64■■■□□ 2.98
KDM5A-209ENST00000543507 CAMSAP2Q08AD1 1489 aa33.6■■■□□ 2.97
KDM5A-209ENST00000543507 CCDC141Q6ZP82 1450 aa33.59■■■□□ 2.97
KDM5A-209ENST00000543507 ADGBQ8N7X0 1667 aa33.58■■■□□ 2.97
KDM5A-209ENST00000543507 PREX1Q8TCU6 1659 aa33.58■■■□□ 2.97
KDM5A-209ENST00000543507 PLXNC1O60486 1568 aa33.57■■■□□ 2.96
KDM5A-209ENST00000543507 HSPA2P54652 639 aa33.57■■■□□ 2.96
KDM5A-209ENST00000543507 PPP6R1Q9UPN7 881 aa33.57■■■□□ 2.96
KDM5A-209ENST00000543507 SETD1BQ9UPS6 1966 aaKnown RBP33.56■■■□□ 2.96
KDM5A-209ENST00000543507 UHRF1BP1Q6BDS2 1440 aa33.55■■■□□ 2.96
KDM5A-209ENST00000543507 TSPY4P0CV99 314 aa33.54■■■□□ 2.96
KDM5A-209ENST00000543507 TSPY10P0CW01 314 aa33.54■■■□□ 2.96
KDM5A-209ENST00000543507 KANK4Q5T7N3 995 aaPredicted RBP33.53■■■□□ 2.96
KDM5A-209ENST00000543507 C3P01024 1663 aa33.52■■■□□ 2.96
KDM5A-209ENST00000543507 DHX29Q7Z478 1369 aaKnown RBP33.5■■■□□ 2.95
KDM5A-209ENST00000543507 MIA2Q96PC5 1412 aa33.5■■■□□ 2.95
KDM5A-209ENST00000543507 ARHGEF5Q12774 1597 aa33.5■■■□□ 2.95
KDM5A-209ENST00000543507 MROH2AA6NES4 1674 aa33.49■■■□□ 2.95
KDM5A-209ENST00000543507 GGT6Q6P531 493 aa33.49■■■□□ 2.95
KDM5A-209ENST00000543507 ZMYM3Q14202 1370 aa33.47■■■□□ 2.95
KDM5A-209ENST00000543507 MYOM3Q5VTT5 1437 aa33.46■■■□□ 2.95
KDM5A-209ENST00000543507 NPATQ14207 1427 aa33.45■■■□□ 2.94
KDM5A-209ENST00000543507 ILDR1Q86SU0 546 aaPredicted RBP33.44■■■□□ 2.94
KDM5A-209ENST00000543507 DMRT2Q9Y5R5 561 aa33.42■■■□□ 2.94
KDM5A-209ENST00000543507 KIF3BO15066 747 aa33.37■■■□□ 2.93
KDM5A-209ENST00000543507 CLTCQ00610 1675 aaKnown RBP33.36■■■□□ 2.93
KDM5A-209ENST00000543507 FAM135AQ9P2D6 1515 aa33.33■■■□□ 2.93
KDM5A-209ENST00000543507 MAST1Q9Y2H9 1570 aa33.32■■■□□ 2.92
KDM5A-209ENST00000543507 FBXO41Q8TF61 875 aa33.26■■■□□ 2.91
KDM5A-209ENST00000543507 PTPRKQ15262 1439 aa33.26■■■□□ 2.91
KDM5A-209ENST00000543507 WASHC2CQ9Y4E1 1318 aa33.25■■■□□ 2.91
KDM5A-209ENST00000543507 KDM5DQ9BY66 1539 aa33.23■■■□□ 2.91
KDM5A-209ENST00000543507 PTPN23Q9H3S7 1636 aa33.2■■■□□ 2.91
KDM5A-209ENST00000543507 STRCQ7RTU9 1775 aa33.2■■■□□ 2.91
KDM5A-209ENST00000543507 PTPRTO14522 1441 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms