RNA–Protein interactions for RNA: ENST00000543507.1

KDM5A-209, Transcript of lysine demethylase 5A, humanhuman

TSL 4

Gene KDM5A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-209ENST00000543507 NISCHQ9Y2I1 1504 aa52.59■■■■■ 6.01
KDM5A-209ENST00000543507 CCDC180Q9P1Z9 1646 aa47.04■■■■■ 5.12
KDM5A-209ENST00000543507 ABCC9O60706 1549 aa46.51■■■■■ 5.04
KDM5A-209ENST00000543507 RB1CC1Q8TDY2 1594 aa44.59■■■■■ 4.73
KDM5A-209ENST00000543507 NACADO15069 1562 aa44.41■■■■■ 4.7
KDM5A-209ENST00000543507 DCAF8L2P0C7V8 631 aa44.24■■■■■ 4.67
KDM5A-209ENST00000543507 MYO15BQ96JP2 1530 aa43.98■■■■■ 4.63
KDM5A-209ENST00000543507 ZCCHC6Q5VYS8 1495 aaKnown RBP43.67■■■■■ 4.58
KDM5A-209ENST00000543507 DCAF1Q9Y4B6 1507 aa43.55■■■■■ 4.56
KDM5A-209ENST00000543507 UNC13AQ9UPW8 1703 aa43.39■■■■■ 4.54
KDM5A-209ENST00000543507 PABPN1Q86U42 306 aaKnown RBP eCLIP43.36■■■■■ 4.53
KDM5A-209ENST00000543507 DNAJC5BQ9UF47 199 aa43.13■■■■■ 4.49
KDM5A-209ENST00000543507 BICRAQ9NZM4 1560 aa43.12■■■■■ 4.49
KDM5A-209ENST00000543507 SHROOM4Q9ULL8 1493 aa42.82■■■■■ 4.45
KDM5A-209ENST00000543507 SCRIBQ14160 1630 aa42.78■■■■■ 4.44
KDM5A-209ENST00000543507 EIF4G1Q04637 1599 aaKnown RBP42.09■■■■■ 4.33
KDM5A-209ENST00000543507 CC2D2AQ9P2K1 1620 aa42.05■■■■■ 4.32
KDM5A-209ENST00000543507 CECR2Q9BXF3 1484 aa41.91■■■■■ 4.3
KDM5A-209ENST00000543507 NCAPD3P42695 1498 aa40.96■■■■■ 4.15
KDM5A-209ENST00000543507 SMARCA4P51532 1647 aa40.9■■■■■ 4.14
KDM5A-209ENST00000543507 ATAD2BQ9ULI0 1458 aa40.85■■■■■ 4.13
KDM5A-209ENST00000543507 SMARCA2P51531 1590 aa40.85■■■■■ 4.13
KDM5A-209ENST00000543507 BAZ1AQ9NRL2 1556 aaPredicted RBP40.85■■■■■ 4.13
KDM5A-209ENST00000543507 HMGXB3Q12766 1538 aa40.7■■■■■ 4.11
KDM5A-209ENST00000543507 PEG3Q9GZU2 1588 aa40.55■■■■■ 4.08
KDM5A-209ENST00000543507 BAZ1BQ9UIG0 1483 aaKnown RBP40.52■■■■■ 4.08
KDM5A-209ENST00000543507 MROH2BQ7Z745 1585 aa40.45■■■■■ 4.07
KDM5A-209ENST00000543507 ERCC6Q03468 1493 aa40.23■■■■■ 4.03
KDM5A-209ENST00000543507 CUX2O14529 1486 aa40.03■■■■■ 4
KDM5A-209ENST00000543507 NESP48681 1621 aa40.02■■■■■ 4
KDM5A-209ENST00000543507 LAMC3Q9Y6N6 1575 aa39.98■■■■□ 3.99
KDM5A-209ENST00000543507 WIZO95785 1651 aa39.98■■■■□ 3.99
KDM5A-209ENST00000543507 RSF1Q96T23 1441 aaPredicted RBP39.82■■■■□ 3.97
KDM5A-209ENST00000543507 PDS5BQ9NTI5 1447 aa39.79■■■■□ 3.96
KDM5A-209ENST00000543507 CADPSQ9ULU8 1353 aa39.75■■■■□ 3.95
KDM5A-209ENST00000543507 TOP2AP11388 1531 aaKnown RBP39.6■■■■□ 3.93
KDM5A-209ENST00000543507 THOC2Q8NI27 1593 aaKnown RBP39.57■■■■□ 3.92
KDM5A-209ENST00000543507 KIF21AQ7Z4S6 1674 aa39.54■■■■□ 3.92
KDM5A-209ENST00000543507 DNAJC5Q9H3Z4 198 aa39.46■■■■□ 3.91
KDM5A-209ENST00000543507 CFTRP13569 1480 aa39.37■■■■□ 3.89
KDM5A-209ENST00000543507 MRC2Q9UBG0 1479 aa39.34■■■■□ 3.89
KDM5A-209ENST00000543507 CEP164Q9UPV0 1460 aa39.3■■■■□ 3.88
KDM5A-209ENST00000543507 FANCD2Q9BXW9 1451 aa39.26■■■■□ 3.88
KDM5A-209ENST00000543507 WDR62O43379 1518 aa39.19■■■■□ 3.86
KDM5A-209ENST00000543507 CCDC88BA6NC98 1476 aa39.11■■■■□ 3.85
KDM5A-209ENST00000543507 PRDM2Q13029 1718 aa38.97■■■■□ 3.83
KDM5A-209ENST00000543507 URB2Q14146 1524 aaKnown RBP38.84■■■■□ 3.81
KDM5A-209ENST00000543507 ABCC8Q09428 1581 aa38.65■■■■□ 3.78
KDM5A-209ENST00000543507 TOPBP1Q92547 1522 aa38.54■■■■□ 3.76
KDM5A-209ENST00000543507 IFT140Q96RY7 1462 aa38.51■■■■□ 3.76
KDM5A-209ENST00000543507 DNMBPQ6XZF7 1577 aa38.47■■■■□ 3.75
KDM5A-209ENST00000543507 SUPT5HO00267 1087 aaKnown RBP38.43■■■■□ 3.74
KDM5A-209ENST00000543507 OSCARQ8IYS5 282 aa38.31■■■■□ 3.72
KDM5A-209ENST00000543507 ZNF608Q9ULD9 1512 aaPredicted RBP38.25■■■■□ 3.71
KDM5A-209ENST00000543507 POLA1P09884 1462 aaPredicted RBP38.17■■■■□ 3.7
KDM5A-209ENST00000543507 TARBP1Q13395 1621 aaKnown RBP38.12■■■■□ 3.69
KDM5A-209ENST00000543507 EIF4G3O43432 1585 aaKnown RBP38.11■■■■□ 3.69
KDM5A-209ENST00000543507 SOGA1O94964 1423 aa38.07■■■■□ 3.69
KDM5A-209ENST00000543507 AQRO60306 1485 aaKnown RBP eCLIP38.02■■■■□ 3.686e-7■■□□□ 11.9
KDM5A-209ENST00000543507 FGD5Q6ZNL6 1462 aa38■■■■□ 3.67
KDM5A-209ENST00000543507 CUX1P39880 1505 aa37.99■■■■□ 3.67
KDM5A-209ENST00000543507 RAD54L2Q9Y4B4 1467 aa37.97■■■■□ 3.67
KDM5A-209ENST00000543507 WDR97A6NE52 1622 aa37.94■■■■□ 3.66
KDM5A-209ENST00000543507 TRIM41Q8WV44 630 aa37.88■■■■□ 3.65
KDM5A-209ENST00000543507 TDRD9Q8NDG6 1382 aaKnown RBP37.87■■■■□ 3.65
KDM5A-209ENST00000543507 FBLN2P98095 1184 aa37.77■■■■□ 3.64
KDM5A-209ENST00000543507 CHD1O14646 1710 aa37.72■■■■□ 3.63
KDM5A-209ENST00000543507 GRIN2BQ13224 1484 aa37.7■■■■□ 3.63
KDM5A-209ENST00000543507 MAGI1Q96QZ7 1491 aaPredicted RBP37.66■■■■□ 3.62
KDM5A-209ENST00000543507 SNAPC4Q5SXM2 1469 aa37.65■■■■□ 3.62
KDM5A-209ENST00000543507 WRNQ14191 1432 aaPredicted RBP eCLIP37.63■■■■□ 3.61
KDM5A-209ENST00000543507 ABCA10Q8WWZ4 1543 aa37.63■■■■□ 3.61
KDM5A-209ENST00000543507 GAPVD1Q14C86 1478 aa37.61■■■■□ 3.61
KDM5A-209ENST00000543507 CHMP7Q8WUX9 453 aaPredicted RBP37.61■■■■□ 3.61
KDM5A-209ENST00000543507 RIMBP3CA6NJZ7 1639 aa37.61■■■■□ 3.61
KDM5A-209ENST00000543507 RIMBP3BA6NNM3 1639 aa37.61■■■■□ 3.61
KDM5A-209ENST00000543507 RIMBP3Q9UFD9 1639 aa37.61■■■■□ 3.61
KDM5A-209ENST00000543507 ARHGEF11O15085 1522 aa37.57■■■■□ 3.61
KDM5A-209ENST00000543507 TOP2BQ02880 1626 aa37.57■■■■□ 3.6
KDM5A-209ENST00000543507 BIVM-ERCC5R4GMW8 1640 aa37.55■■■■□ 3.6
KDM5A-209ENST00000543507 SYNJ2O15056 1496 aa37.51■■■■□ 3.59
KDM5A-209ENST00000543507 PBRM1Q86U86 1689 aa37.49■■■■□ 3.59
KDM5A-209ENST00000543507 ABCA5Q8WWZ7 1642 aa37.47■■■■□ 3.59
KDM5A-209ENST00000543507 SYNJ1O43426 1573 aa37.45■■■■□ 3.59
KDM5A-209ENST00000543507 CLASP1Q7Z460 1538 aa37.33■■■■□ 3.57
KDM5A-209ENST00000543507 CYB5RLQ6IPT4 315 aa37.31■■■■□ 3.56
KDM5A-209ENST00000543507 ERICH3Q5RHP9 1530 aa37.2■■■■□ 3.55
KDM5A-209ENST00000543507 ARAP1Q96P48 1450 aa37.2■■■■□ 3.54
KDM5A-209ENST00000543507 GRIN2AQ12879 1464 aa37.18■■■■□ 3.54
KDM5A-209ENST00000543507 FHAD1B1AJZ9 1412 aa37.18■■■■□ 3.54
KDM5A-209ENST00000543507 ADAMTS12P58397 1594 aa37.17■■■■□ 3.54
KDM5A-209ENST00000543507 NUP160Q12769 1436 aa37.03■■■■□ 3.52
KDM5A-209ENST00000543507 CEP170Q5SW79 1584 aa36.95■■■■□ 3.51
KDM5A-209ENST00000543507 KIF27Q86VH2 1401 aa36.93■■■■□ 3.5
KDM5A-209ENST00000543507 TRHP20396 242 aaPredicted RBP36.81■■■■□ 3.48
KDM5A-209ENST00000543507 IGF1RP08069 1367 aa36.78■■■■□ 3.48
KDM5A-209ENST00000543507 SHROOM2Q13796 1616 aa36.78■■■■□ 3.48
KDM5A-209ENST00000543507 CUL7Q14999 1698 aa36.74■■■■□ 3.47
KDM5A-209ENST00000543507 JPH4Q96JJ6 628 aa36.71■■■■□ 3.47
KDM5A-209ENST00000543507 ERCC6L2Q5T890 1561 aa36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms