RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 TROQ12816 1431 aaPredicted RBP32.29■■■□□ 2.76
CACNA1C-230ENST00000543114 YEATS2Q9ULM3 1422 aa32.29■■■□□ 2.76
CACNA1C-230ENST00000543114 SCAPERQ9BY12 1400 aa32.26■■■□□ 2.76
CACNA1C-230ENST00000543114 CDK11AQ9UQ88 783 aaPredicted RBP32.26■■■□□ 2.75
CACNA1C-230ENST00000543114 RIMS1Q86UR5 1692 aaKnown RBP32.26■■■□□ 2.75
CACNA1C-230ENST00000543114 MAGI2Q86UL8 1455 aa32.25■■■□□ 2.75
CACNA1C-230ENST00000543114 CLIP1P30622 1438 aa32.22■■■□□ 2.75
CACNA1C-230ENST00000543114 CASKIN1Q8WXD9 1431 aa32.19■■■□□ 2.74
CACNA1C-230ENST00000543114 ARHGAP5Q13017 1502 aa32.19■■■□□ 2.74
CACNA1C-230ENST00000543114 CCDC18Q5T9S5 1454 aa32.17■■■□□ 2.74
CACNA1C-230ENST00000543114 EFCAB2Q5VUJ9 269 aa32.16■■■□□ 2.74
CACNA1C-230ENST00000543114 CDC42BPBQ9Y5S2 1711 aa32.15■■■□□ 2.74
CACNA1C-230ENST00000543114 PREX2Q70Z35 1606 aa32.12■■■□□ 2.73
CACNA1C-230ENST00000543114 ILDR1Q86SU0 546 aaPredicted RBP32.12■■■□□ 2.73
CACNA1C-230ENST00000543114 KDM5CP41229 1560 aa32.11■■■□□ 2.73
CACNA1C-230ENST00000543114 FER1L4A9Z1Z3 1794 aa32.11■■■□□ 2.73
CACNA1C-230ENST00000543114 ZNF518AQ6AHZ1 1483 aa32.1■■■□□ 2.73
CACNA1C-230ENST00000543114 FYCO1Q9BQS8 1478 aa32.1■■■□□ 2.73
CACNA1C-230ENST00000543114 LMTK3Q96Q04 1460 aa32.1■■■□□ 2.73
CACNA1C-230ENST00000543114 ATP10AO60312 1499 aa32.07■■■□□ 2.72
CACNA1C-230ENST00000543114 C9orf84Q5VXU9 1444 aa32.07■■■□□ 2.72
CACNA1C-230ENST00000543114 CDC42BPAQ5VT25 1732 aa32.03■■■□□ 2.72
CACNA1C-230ENST00000543114 ABCC1P33527 1531 aa32.03■■■□□ 2.72
CACNA1C-230ENST00000543114 ARHGEF12Q9NZN5 1544 aa32.02■■■□□ 2.72
CACNA1C-230ENST00000543114 MLECQ14165 292 aa32.01■■■□□ 2.71
CACNA1C-230ENST00000543114 ITSN2Q9NZM3 1697 aa32.01■■■□□ 2.71
CACNA1C-230ENST00000543114 DIP2CQ9Y2E4 1556 aa32■■■□□ 2.71
CACNA1C-230ENST00000543114 AFAP1Q8N556 730 aa31.98■■■□□ 2.71
CACNA1C-230ENST00000543114 ABCA6Q8N139 1617 aa31.97■■■□□ 2.71
CACNA1C-230ENST00000543114 PLPPR3Q6T4P5 718 aa31.95■■■□□ 2.71
CACNA1C-230ENST00000543114 TRAPPC8Q9Y2L5 1435 aa31.93■■■□□ 2.7
CACNA1C-230ENST00000543114 REREQ9P2R6 1566 aa31.93■■■□□ 2.7
CACNA1C-230ENST00000543114 MLH3Q9UHC1 1453 aa31.92■■■□□ 2.7
CACNA1C-230ENST00000543114 SAMD9LQ8IVG5 1584 aa31.88■■■□□ 2.69
CACNA1C-230ENST00000543114 KIDINS220Q9ULH0 1771 aa31.86■■■□□ 2.69
CACNA1C-230ENST00000543114 MYT1LQ9UL68 1186 aa31.85■■■□□ 2.69
CACNA1C-230ENST00000543114 HSPA2P54652 639 aa31.84■■■□□ 2.69
CACNA1C-230ENST00000543114 GPATCH8Q9UKJ3 1502 aaKnown RBP31.84■■■□□ 2.69
CACNA1C-230ENST00000543114 SYCP2Q9BX26 1530 aa31.82■■■□□ 2.68
CACNA1C-230ENST00000543114 PREX1Q8TCU6 1659 aa31.81■■■□□ 2.68
CACNA1C-230ENST00000543114 AGLP35573 1532 aa31.8■■■□□ 2.68
CACNA1C-230ENST00000543114 ZNF777Q9ULD5 760 aaPredicted RBP31.75■■■□□ 2.67
CACNA1C-230ENST00000543114 CEBPAP49715 358 aaPredicted RBP31.74■■■□□ 2.67
CACNA1C-230ENST00000543114 CEP162Q5TB80 1403 aa31.74■■■□□ 2.67
CACNA1C-230ENST00000543114 MTUS2Q5JR59 1369 aa31.73■■■□□ 2.67
CACNA1C-230ENST00000543114 C3P01024 1663 aa31.72■■■□□ 2.67
CACNA1C-230ENST00000543114 EHBP1L1Q8N3D4 1523 aa31.7■■■□□ 2.67
CACNA1C-230ENST00000543114 CCNB3Q8WWL7 1395 aa31.69■■■□□ 2.66
CACNA1C-230ENST00000543114 TIAM1Q13009 1591 aa31.69■■■□□ 2.66
CACNA1C-230ENST00000543114 INO80Q9ULG1 1556 aaPredicted RBP31.69■■■□□ 2.66
CACNA1C-230ENST00000543114 ATP7AQ04656 1500 aa31.67■■■□□ 2.66
CACNA1C-230ENST00000543114 KIAA1107Q9UPP5 1409 aa31.66■■■□□ 2.66
CACNA1C-230ENST00000543114 PLEKHH2Q8IVE3 1493 aa31.66■■■□□ 2.66
CACNA1C-230ENST00000543114 CFDP1Q9UEE9 299 aaPredicted RBP31.65■■■□□ 2.66
CACNA1C-230ENST00000543114 HNRNPMP52272 730 aaKnown RBP eCLIP31.64■■■□□ 2.66
CACNA1C-230ENST00000543114 FBXO41Q8TF61 875 aa31.64■■■□□ 2.66
CACNA1C-230ENST00000543114 SETD1BQ9UPS6 1966 aaKnown RBP31.63■■■□□ 2.65
CACNA1C-230ENST00000543114 SUPT6HQ7KZ85 1726 aaKnown RBP31.63■■■□□ 2.65
CACNA1C-230ENST00000543114 SPAG9O60271 1321 aaKnown RBP31.62■■■□□ 2.65
CACNA1C-230ENST00000543114 PLXNC1O60486 1568 aa31.61■■■□□ 2.65
CACNA1C-230ENST00000543114 UHRF1BP1Q6BDS2 1440 aa31.61■■■□□ 2.65
CACNA1C-230ENST00000543114 STRCQ7RTU9 1775 aa31.58■■■□□ 2.65
CACNA1C-230ENST00000543114 MROH2AA6NES4 1674 aa31.57■■■□□ 2.64
CACNA1C-230ENST00000543114 CNTLNQ9NXG0 1405 aa31.57■■■□□ 2.64
CACNA1C-230ENST00000543114 ESF1Q9H501 851 aaKnown RBP31.54■■■□□ 2.64
CACNA1C-230ENST00000543114 A2MP01023 1474 aa31.52■■■□□ 2.64
CACNA1C-230ENST00000543114 ZNF644Q9H582 1327 aaPredicted RBP31.52■■■□□ 2.64
CACNA1C-230ENST00000543114 MBD5Q9P267 1494 aa31.51■■■□□ 2.63
CACNA1C-230ENST00000543114 ADGBQ8N7X0 1667 aa31.51■■■□□ 2.63
CACNA1C-230ENST00000543114 CLTCQ00610 1675 aaKnown RBP31.48■■■□□ 2.63
CACNA1C-230ENST00000543114 NCOA2Q15596 1464 aa31.47■■■□□ 2.63
CACNA1C-230ENST00000543114 NPATQ14207 1427 aa31.41■■■□□ 2.62
CACNA1C-230ENST00000543114 CAMSAP2Q08AD1 1489 aa31.41■■■□□ 2.62
CACNA1C-230ENST00000543114 VPS8Q8N3P4 1428 aa31.41■■■□□ 2.62
CACNA1C-230ENST00000543114 ZMYM3Q14202 1370 aa31.4■■■□□ 2.62
CACNA1C-230ENST00000543114 RTEL1-TNFRSF6BF6WH68 1400 aa31.39■■■□□ 2.62
CACNA1C-230ENST00000543114 CERKQ8TCT0 537 aa31.38■■■□□ 2.61
CACNA1C-230ENST00000543114 CCDC141Q6ZP82 1450 aa31.38■■■□□ 2.61
CACNA1C-230ENST00000543114 MYO3AQ8NEV4 1616 aa31.35■■■□□ 2.61
CACNA1C-230ENST00000543114 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
CACNA1C-230ENST00000543114 DMRT2Q9Y5R5 561 aa31.34■■■□□ 2.61
CACNA1C-230ENST00000543114 ZNF142P52746 1687 aaPredicted RBP31.34■■■□□ 2.61
CACNA1C-230ENST00000543114 NCOA1Q15788 1441 aa31.33■■■□□ 2.61
CACNA1C-230ENST00000543114 GGT6Q6P531 493 aa31.33■■■□□ 2.61
CACNA1C-230ENST00000543114 LRRC9Q6ZRR7 1453 aa31.33■■■□□ 2.61
CACNA1C-230ENST00000543114 PTPRTO14522 1441 aa31.32■■■□□ 2.6
CACNA1C-230ENST00000543114 PTPRKQ15262 1439 aa31.31■■■□□ 2.6
CACNA1C-230ENST00000543114 CAMSAP1Q5T5Y3 1602 aa31.3■■■□□ 2.6
CACNA1C-230ENST00000543114 ARHGEF5Q12774 1597 aa31.29■■■□□ 2.6
CACNA1C-230ENST00000543114 DHX29Q7Z478 1369 aaKnown RBP31.28■■■□□ 2.6
CACNA1C-230ENST00000543114 CEP170BQ9Y4F5 1589 aaPredicted RBP31.26■■■□□ 2.59
CACNA1C-230ENST00000543114 MAP3K1Q13233 1512 aa31.23■■■□□ 2.59
CACNA1C-230ENST00000543114 PPP6R1Q9UPN7 881 aa31.22■■■□□ 2.59
CACNA1C-230ENST00000543114 KDM5DQ9BY66 1539 aa31.19■■■□□ 2.58
CACNA1C-230ENST00000543114 RSPH4AQ5TD94 716 aa31.19■■■□□ 2.58
CACNA1C-230ENST00000543114 LTBP4Q8N2S1 1624 aa31.19■■■□□ 2.58
CACNA1C-230ENST00000543114 FAM135AQ9P2D6 1515 aa31.18■■■□□ 2.58
CACNA1C-230ENST00000543114 PLA2R1Q13018 1463 aa31.17■■■□□ 2.58
CACNA1C-230ENST00000543114 KANK4Q5T7N3 995 aaPredicted RBP31.17■■■□□ 2.58
CACNA1C-230ENST00000543114 KIF3BO15066 747 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms