RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 RAPGEF3O95398 923 aa15.63■□□□□ 0.09
TNFRSF1A-214ENST00000543048 PCF11O94913 1555 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1A-214ENST00000543048 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
TNFRSF1A-214ENST00000543048 TROQ12816 1431 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-214ENST00000543048 CCDC18Q5T9S5 1454 aa15.62■□□□□ 0.09
TNFRSF1A-214ENST00000543048 AKNAQ7Z591 1439 aa15.61■□□□□ 0.09
TNFRSF1A-214ENST00000543048 CFAP74Q9C0B2 1584 aa15.61■□□□□ 0.09
TNFRSF1A-214ENST00000543048 PLCH2O75038 1416 aa15.6■□□□□ 0.09
TNFRSF1A-214ENST00000543048 FANCAO15360 1455 aa15.6■□□□□ 0.09
TNFRSF1A-214ENST00000543048 FYCO1Q9BQS8 1478 aa15.6■□□□□ 0.09
TNFRSF1A-214ENST00000543048 MYO5CQ9NQX4 1742 aa15.6■□□□□ 0.09
TNFRSF1A-214ENST00000543048 EFCAB2Q5VUJ9 269 aa15.59■□□□□ 0.09
TNFRSF1A-214ENST00000543048 KIF14Q15058 1648 aa15.58■□□□□ 0.09
TNFRSF1A-214ENST00000543048 CEP162Q5TB80 1403 aa15.58■□□□□ 0.08
TNFRSF1A-214ENST00000543048 DENND4BO75064 1496 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1A-214ENST00000543048 RICTORQ6R327 1708 aa15.55■□□□□ 0.08
TNFRSF1A-214ENST00000543048 ADGRL1O94910 1474 aa15.54■□□□□ 0.08
TNFRSF1A-214ENST00000543048 CDC42BPBQ9Y5S2 1711 aa15.53■□□□□ 0.08
TNFRSF1A-214ENST00000543048 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
TNFRSF1A-214ENST00000543048 SCAPERQ9BY12 1400 aa15.52■□□□□ 0.08
TNFRSF1A-214ENST00000543048 ARHGAP5Q13017 1502 aa15.5■□□□□ 0.07
TNFRSF1A-214ENST00000543048 CDC42BPAQ5VT25 1732 aa15.49■□□□□ 0.07
TNFRSF1A-214ENST00000543048 MTUS2Q5JR59 1369 aa15.47■□□□□ 0.07
TNFRSF1A-214ENST00000543048 PREX2Q70Z35 1606 aa15.46■□□□□ 0.07
TNFRSF1A-214ENST00000543048 MAGI2Q86UL8 1455 aa15.46■□□□□ 0.07
TNFRSF1A-214ENST00000543048 ARID4BQ4LE39 1312 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-214ENST00000543048 ZMYM4Q5VZL5 1548 aa15.46■□□□□ 0.07
TNFRSF1A-214ENST00000543048 POGZQ7Z3K3 1410 aa15.45■□□□□ 0.06
TNFRSF1A-214ENST00000543048 AFAP1Q8N556 730 aa15.44■□□□□ 0.06
TNFRSF1A-214ENST00000543048 ZNF777Q9ULD5 760 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1A-214ENST00000543048 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
TNFRSF1A-214ENST00000543048 ARHGEF40Q8TER5 1519 aa15.43■□□□□ 0.06
TNFRSF1A-214ENST00000543048 GPATCH8Q9UKJ3 1502 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-214ENST00000543048 CCNB3Q8WWL7 1395 aa15.42■□□□□ 0.06
TNFRSF1A-214ENST00000543048 MYT1LQ9UL68 1186 aa15.42■□□□□ 0.06
TNFRSF1A-214ENST00000543048 ZNF518AQ6AHZ1 1483 aa15.41■□□□□ 0.06
TNFRSF1A-214ENST00000543048 CFDP1Q9UEE9 299 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-214ENST00000543048 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
TNFRSF1A-214ENST00000543048 YEATS2Q9ULM3 1422 aa15.41■□□□□ 0.06
TNFRSF1A-214ENST00000543048 BCORL1Q5H9F3 1711 aa15.4■□□□□ 0.06
TNFRSF1A-214ENST00000543048 ADAMTSL3P82987 1691 aa15.4■□□□□ 0.06
TNFRSF1A-214ENST00000543048 ITSN2Q9NZM3 1697 aa15.39■□□□□ 0.05
TNFRSF1A-214ENST00000543048 ATP10AO60312 1499 aa15.39■□□□□ 0.05
TNFRSF1A-214ENST00000543048 EHBP1L1Q8N3D4 1523 aa15.38■□□□□ 0.05
TNFRSF1A-214ENST00000543048 ARHGEF12Q9NZN5 1544 aa15.38■□□□□ 0.05
TNFRSF1A-214ENST00000543048 ABCC1P33527 1531 aa15.38■□□□□ 0.05
TNFRSF1A-214ENST00000543048 KDM5CP41229 1560 aa15.37■□□□□ 0.05
TNFRSF1A-214ENST00000543048 TRAPPC8Q9Y2L5 1435 aa15.37■□□□□ 0.05
TNFRSF1A-214ENST00000543048 HNRNPMP52272 730 aaKnown RBP eCLIP15.37■□□□□ 0.05
TNFRSF1A-214ENST00000543048 TIAM1Q13009 1591 aa15.36■□□□□ 0.05
TNFRSF1A-214ENST00000543048 SUPT6HQ7KZ85 1726 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-214ENST00000543048 SAMD9LQ8IVG5 1584 aa15.36■□□□□ 0.05
TNFRSF1A-214ENST00000543048 MLH3Q9UHC1 1453 aa15.35■□□□□ 0.05
TNFRSF1A-214ENST00000543048 SIGLEC1Q9BZZ2 1709 aa15.34■□□□□ 0.05
TNFRSF1A-214ENST00000543048 PLEKHH2Q8IVE3 1493 aa15.34■□□□□ 0.05
TNFRSF1A-214ENST00000543048 HECW2Q9P2P5 1572 aa15.34■□□□□ 0.05
TNFRSF1A-214ENST00000543048 C9orf84Q5VXU9 1444 aa15.34■□□□□ 0.05
TNFRSF1A-214ENST00000543048 KIAA1107Q9UPP5 1409 aa15.34■□□□□ 0.05
TNFRSF1A-214ENST00000543048 MLECQ14165 292 aa15.33■□□□□ 0.04
TNFRSF1A-214ENST00000543048 MAP3K1Q13233 1512 aa15.33■□□□□ 0.04
TNFRSF1A-214ENST00000543048 MADDQ8WXG6 1647 aa15.32■□□□□ 0.04
TNFRSF1A-214ENST00000543048 APLP2Q06481 763 aa15.32■□□□□ 0.04
TNFRSF1A-214ENST00000543048 PTPRMP28827 1452 aa15.32■□□□□ 0.04
TNFRSF1A-214ENST00000543048 KIDINS220Q9ULH0 1771 aa15.31■□□□□ 0.04
TNFRSF1A-214ENST00000543048 SPAG9O60271 1321 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-214ENST00000543048 NCOA2Q15596 1464 aa15.31■□□□□ 0.04
TNFRSF1A-214ENST00000543048 LRRC9Q6ZRR7 1453 aa15.31■□□□□ 0.04
TNFRSF1A-214ENST00000543048 KANK4Q5T7N3 995 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-214ENST00000543048 RIMS1Q86UR5 1692 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-214ENST00000543048 SYCP2Q9BX26 1530 aa15.3■□□□□ 0.04
TNFRSF1A-214ENST00000543048 ZNF644Q9H582 1327 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-214ENST00000543048 DIP2CQ9Y2E4 1556 aa15.29■□□□□ 0.04
TNFRSF1A-214ENST00000543048 FER1L4A9Z1Z3 1794 aa15.28■□□□□ 0.04
TNFRSF1A-214ENST00000543048 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
TNFRSF1A-214ENST00000543048 REREQ9P2R6 1566 aa15.28■□□□□ 0.04
TNFRSF1A-214ENST00000543048 RSPH4AQ5TD94 716 aa15.27■□□□□ 0.04
TNFRSF1A-214ENST00000543048 SETD1BQ9UPS6 1966 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-214ENST00000543048 MBD5Q9P267 1494 aa15.24■□□□□ 0.03
TNFRSF1A-214ENST00000543048 AGLP35573 1532 aa15.23■□□□□ 0.03
TNFRSF1A-214ENST00000543048 ATP7AQ04656 1500 aa15.22■□□□□ 0.03
TNFRSF1A-214ENST00000543048 ESF1Q9H501 851 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-214ENST00000543048 CAMSAP2Q08AD1 1489 aa15.2■□□□□ 0.02
TNFRSF1A-214ENST00000543048 INO80Q9ULG1 1556 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1A-214ENST00000543048 RTEL1-TNFRSF6BF6WH68 1400 aa15.2■□□□□ 0.02
TNFRSF1A-214ENST00000543048 ADGBQ8N7X0 1667 aa15.2■□□□□ 0.02
TNFRSF1A-214ENST00000543048 TSPY4P0CV99 314 aa15.2■□□□□ 0.02
TNFRSF1A-214ENST00000543048 TSPY10P0CW01 314 aa15.2■□□□□ 0.02
TNFRSF1A-214ENST00000543048 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-214ENST00000543048 A2MP01023 1474 aa15.18■□□□□ 0.02
TNFRSF1A-214ENST00000543048 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
TNFRSF1A-214ENST00000543048 MIA2Q96PC5 1412 aa15.17■□□□□ 0.02
TNFRSF1A-214ENST00000543048 ARHGEF5Q12774 1597 aa15.17■□□□□ 0.02
TNFRSF1A-214ENST00000543048 CCDC141Q6ZP82 1450 aa15.17■□□□□ 0.02
TNFRSF1A-214ENST00000543048 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF1A-214ENST00000543048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
TNFRSF1A-214ENST00000543048 DHX29Q7Z478 1369 aaKnown RBP15.14■□□□□ 0.01
TNFRSF1A-214ENST00000543048 GGT6Q6P531 493 aa15.14■□□□□ 0.01
TNFRSF1A-214ENST00000543048 PLXNC1O60486 1568 aa15.14■□□□□ 0.01
TNFRSF1A-214ENST00000543048 C3P01024 1663 aa15.13■□□□□ 0.01
TNFRSF1A-214ENST00000543048 CNTLNQ9NXG0 1405 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms